miRNA 157 details

Id Micro157
SequenceGCTCACCTCTCTTTCTGTCAGT 
Annotated namesaly-miR156b-3p; 
Annotated pre-miRNANone

Targets of miRNA 157

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_72489; FTRINITY_DN56008_c5_g1_i2 958 979 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_72494; FTRINITY_DN56008_c5_g1_i6 1049 1070 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_72491; FTRINITY_DN56008_c5_g1_i4 958 979 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_72490; FTRINITY_DN56008_c5_g1_i3 958 979 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_72495; FTRINITY_DN56008_c5_g1_i7 1049 1070 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_156479; FTRINITY_DN56555_c0_g1_i9 175 196 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156471; FTRINITY_DN56555_c0_g1_i2 1012 1033 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156472; FTRINITY_DN56555_c0_g1_i3 1012 1033 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156491; FTRINITY_DN56555_c0_g1_i20 1012 1033 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156486; FTRINITY_DN56555_c0_g1_i16 1012 1033 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156485; FTRINITY_DN56555_c0_g1_i15 1012 1033 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_156490; FTRINITY_DN56555_c0_g1_i19 1146 1167 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_267591; FTRINITY_DN55858_c1_g1_i12 1574 1595 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_267588; FTRINITY_DN55858_c1_g1_i10 1686 1707 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_267592; FTRINITY_DN55858_c1_g1_i13 1714 1735 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_267586; FTRINITY_DN55858_c1_g1_i8 1831 1852 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_180385; FTRINITY_DN53592_c3_g5_i1 1902 1923 GATTACAGAAAGAGGGGTGGGT BLAST psRNATarget
Ll_transcript_130620; FTRINITY_DN57596_c0_g1_i1 16 37 CGTGAAAAAAAGGGAGGTGAGC BLAST psRNATarget
Ll_transcript_41718; FTRINITY_DN74609_c0_g1_i1 84 105 GGAGAGGGAAAGAGAGGTGAGG BLAST psRNATarget
Ll_transcript_190207; FTRINITY_DN56789_c0_g2_i1 145 166 ATCAGCAGAAGGAGAGGTGAGA BLAST psRNATarget
Ll_transcript_79910; FTRINITY_DN58165_c2_g1_i12 348 369 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_96922; FTRINITY_DN44399_c0_g1_i2 264 285 ATGGAAAGAAAGAGAGATGAGT BLAST psRNATarget
Ll_transcript_96921; FTRINITY_DN44399_c0_g1_i1 288 309 ATGGAAAGAAAGAGAGATGAGT BLAST psRNATarget
Ll_transcript_79908; FTRINITY_DN58165_c2_g1_i10 348 369 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_79919; FTRINITY_DN58165_c2_g1_i19 348 369 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_91109; FTRINITY_DN53917_c7_g4_i9 87 108 CCAGAGAGAAGGGGAGGTGAGA BLAST psRNATarget
Ll_transcript_32120; FTRINITY_DN58470_c1_g3_i2 910 931 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_32129; FTRINITY_DN58470_c1_g3_i4 910 931 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_32119; FTRINITY_DN58470_c1_g3_i1 1377 1398 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_32122; FTRINITY_DN58470_c1_g3_i3 1377 1398 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_274615; FTRINITY_DN54281_c1_g3_i1 302 323 ACAGATAGAGAGAGAGTTGAGA BLAST psRNATarget
Ll_transcript_65079; FTRINITY_DN55343_c0_g1_i6 1229 1250 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_65076; FTRINITY_DN55343_c0_g1_i4 1229 1250 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_65078; FTRINITY_DN55343_c0_g1_i5 1207 1228 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_65081; FTRINITY_DN55343_c0_g1_i8 1229 1250 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_32828; FTRINITY_DN58428_c1_g2_i1 235 256 TTTGACAGCAAGGGGGGTGGGA BLAST psRNATarget
Ll_transcript_26163; FTRINITY_DN51761_c0_g1_i9 530 551 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_153404; FTRINITY_DN45053_c0_g1_i1 1015 1036 GTGGATAGGAAGAGAGGTGAAT BLAST psRNATarget
Ll_transcript_26147; FTRINITY_DN51761_c0_g1_i3 1188 1209 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_26156; FTRINITY_DN51761_c0_g1_i5 1359 1380 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_174590; FTRINITY_DN17933_c0_g1_i1 211 232 ATAGATAGGAAGAGAGGAGAGA BLAST psRNATarget
Ll_transcript_153405; FTRINITY_DN45053_c0_g1_i2 1478 1499 GTGGATAGGAAGAGAGGTGAAT BLAST psRNATarget
Ll_transcript_26142; FTRINITY_DN51761_c0_g1_i1 1770 1791 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_26155; FTRINITY_DN51761_c0_g1_i4 2104 2125 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_26162; FTRINITY_DN51761_c0_g1_i8 2681 2702 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_174724; FTRINITY_DN83702_c0_g1_i1 6 27 AATGATGTAGAGAGAGGTGAGA BLAST psRNATarget
Ll_transcript_93740; FTRINITY_DN54851_c3_g3_i1 788 809 GTTGAGATGAAGAGAGGTGGGT BLAST psRNATarget
Ll_transcript_47923; FTRINITY_DN79177_c0_g1_i1 367 388 CATGGCATAAGGGGGGGTGAGT BLAST psRNATarget
Ll_transcript_184183; FTRINITY_DN57420_c4_g3_i1 3025 3046 TTCCCAAGAAAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_67770; FTRINITY_DN55031_c1_g2_i3 196 217 TCAGACAGATAGAGAGATGGGC BLAST psRNATarget
Ll_transcript_64902; FTRINITY_DN55395_c0_g1_i3 332 353 TCCAATGGGAAGGGAGGTGGGC BLAST psRNATarget
Ll_transcript_64910; FTRINITY_DN55395_c0_g1_i10 332 353 TCCAATGGGAAGGGAGGTGGGC BLAST psRNATarget
Ll_transcript_411247; TRINITY_DN44987_c0_g1_i4 952 973 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_411245; TRINITY_DN44987_c0_g1_i2 952 973 CTTGACAGGAAGACAGGTGAGC BLAST psRNATarget
Ll_transcript_343897; TRINITY_DN49876_c1_g1_i12 291 312 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_343895; TRINITY_DN49876_c1_g1_i10 291 312 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_343905; TRINITY_DN49876_c1_g1_i18 754 775 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_343902; TRINITY_DN49876_c1_g1_i16 992 1013 TCCGACAAAGAGAGAGGTGAGT BLAST psRNATarget
Ll_transcript_469598; TRINITY_DN45460_c1_g1_i3 987 1008 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_469596; TRINITY_DN45460_c1_g1_i1 1244 1265 AGTGAGAGAAAGAGGGGTGAGG BLAST psRNATarget
Ll_transcript_315843; TRINITY_DN46747_c1_g6_i1 1911 1932 GATTACAGAAAGAGGGGTGGGT BLAST psRNATarget
Ll_transcript_495107; TRINITY_DN77103_c0_g1_i1 140 161 ATGGAAAGAAAGAGAGATGAGT BLAST psRNATarget
Ll_transcript_529993; TRINITY_DN51080_c0_g2_i1 619 640 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_529994; TRINITY_DN51080_c0_g2_i2 1605 1626 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_502605; TRINITY_DN77369_c0_g1_i1 201 222 CCAGAGAGAAGGGGAGGTGAGA BLAST psRNATarget
Ll_transcript_530007; TRINITY_DN51080_c0_g2_i11 1605 1626 CCATGCAGATAGAGAGGTGAGC BLAST psRNATarget
Ll_transcript_309203; TRINITY_DN47170_c3_g1_i2 912 933 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_309201; TRINITY_DN47170_c3_g1_i1 1379 1400 ATTGAAAGAAAGTGGGGTGAGT BLAST psRNATarget
Ll_transcript_496187; TRINITY_DN66826_c0_g1_i1 623 644 AATGACATAAAGAGAGGTGAAA BLAST psRNATarget
Ll_transcript_465789; TRINITY_DN49233_c1_g3_i3 1193 1214 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_465800; TRINITY_DN49233_c1_g3_i7 1193 1214 CTTGATGGAGAGGGAGTTGAGC BLAST psRNATarget
Ll_transcript_424532; TRINITY_DN47945_c0_g2_i3 632 653 ACAGATAGAGAGAGAGTTGAGA BLAST psRNATarget
Ll_transcript_408077; TRINITY_DN35858_c0_g1_i1 942 963 GTGGATAGGAAGAGAGGTGAAT BLAST psRNATarget
Ll_transcript_408078; TRINITY_DN35858_c0_g1_i2 990 1011 GTGGATAGGAAGAGAGGTGAAT BLAST psRNATarget
Ll_transcript_439454; TRINITY_DN48303_c1_g2_i4 1188 1209 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_439456; TRINITY_DN48303_c1_g2_i6 1770 1791 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_439459; TRINITY_DN48303_c1_g2_i9 2194 2215 CATGACAGAAAGAGAGATAAGT BLAST psRNATarget
Ll_transcript_291601; TRINITY_DN49161_c2_g1_i2 736 757 GTTGAGATGAAGAGAGGTGGGT BLAST psRNATarget
Ll_transcript_322152; TRINITY_DN62013_c0_g1_i1 404 425 CATGGCATAAGGGGGGGTGAGT BLAST psRNATarget
Ll_transcript_291602; TRINITY_DN49161_c2_g1_i3 736 757 GTTGAGATGAAGAGAGGTGGGT BLAST psRNATarget
Ll_transcript_490820; TRINITY_DN50319_c3_g2_i2 3351 3372 TTCCCAAGAAAGAGAGGTGAGT BLAST psRNATarget

Expression of miRNA 157


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)