miRNA 162 details

Id Micro162
SequenceGCTCTCTAAGCTTCTGTCATCA 
Annotated namesaly-miR157b-3p; 
Annotated pre-miRNANone

Targets of miRNA 162

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_35756; FTRINITY_DN58782_c3_g4_i2 587 608 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35764; FTRINITY_DN58782_c3_g4_i7 670 691 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35778; FTRINITY_DN58782_c3_g4_i14 718 739 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35761; FTRINITY_DN58782_c3_g4_i4 871 892 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35788; FTRINITY_DN58782_c3_g4_i20 941 962 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35787; FTRINITY_DN58782_c3_g4_i19 1140 1161 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_35773; FTRINITY_DN58782_c3_g4_i11 2051 2072 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_185537; FTRINITY_DN57413_c0_g5_i1 331 352 GACTGAGGGAAGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_221509; FTRINITY_DN47438_c0_g1_i1 135 156 TCATAACAGAAGCTGAGAGAGC BLAST psRNATarget
Ll_transcript_7124; FTRINITY_DN58506_c0_g1_i16 2577 2598 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_7103; FTRINITY_DN58506_c0_g1_i6 2588 2609 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_7099; FTRINITY_DN58506_c0_g1_i4 2637 2658 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_7130; FTRINITY_DN58506_c0_g1_i19 2781 2802 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_7110; FTRINITY_DN58506_c0_g1_i9 2841 2862 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_61528; FTRINITY_DN56293_c0_g2_i9 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61537; FTRINITY_DN56293_c0_g2_i15 936 957 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61529; FTRINITY_DN56293_c0_g2_i10 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61531; FTRINITY_DN56293_c0_g2_i11 936 957 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61525; FTRINITY_DN56293_c0_g2_i7 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61542; FTRINITY_DN56293_c0_g2_i19 995 1016 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61518; FTRINITY_DN56293_c0_g2_i3 936 957 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61523; FTRINITY_DN56293_c0_g2_i6 1022 1043 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61533; FTRINITY_DN56293_c0_g2_i13 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61517; FTRINITY_DN56293_c0_g2_i2 995 1016 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61526; FTRINITY_DN56293_c0_g2_i8 1022 1043 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61520; FTRINITY_DN56293_c0_g2_i4 995 1016 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61538; FTRINITY_DN56293_c0_g2_i16 1022 1043 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61521; FTRINITY_DN56293_c0_g2_i5 936 957 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61535; FTRINITY_DN56293_c0_g2_i14 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61541; FTRINITY_DN56293_c0_g2_i18 936 957 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61516; FTRINITY_DN56293_c0_g2_i1 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_61532; FTRINITY_DN56293_c0_g2_i12 957 978 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_187280; FTRINITY_DN51830_c0_g1_i3 166 187 TGATGATGGAAGCATAGAGAGT BLAST psRNATarget
Ll_transcript_19951; FTRINITY_DN55155_c0_g1_i5 718 739 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19944; FTRINITY_DN55155_c0_g1_i2 642 663 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19971; FTRINITY_DN55155_c0_g1_i12 929 950 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19969; FTRINITY_DN55155_c0_g1_i11 642 663 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19945; FTRINITY_DN55155_c0_g1_i3 685 706 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19966; FTRINITY_DN55155_c0_g1_i9 692 713 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19937; FTRINITY_DN55155_c0_g1_i1 642 663 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19963; FTRINITY_DN55155_c0_g1_i8 692 713 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_19953; FTRINITY_DN55155_c0_g1_i6 642 663 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_30265; FTRINITY_DN58415_c0_g1_i4 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_19950; FTRINITY_DN55155_c0_g1_i4 642 663 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_30266; FTRINITY_DN58415_c0_g1_i5 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30275; FTRINITY_DN58415_c0_g1_i13 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30276; FTRINITY_DN58415_c0_g1_i14 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30270; FTRINITY_DN58415_c0_g1_i9 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30281; FTRINITY_DN58415_c0_g1_i18 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30271; FTRINITY_DN58415_c0_g1_i10 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30282; FTRINITY_DN58415_c0_g1_i19 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30262; FTRINITY_DN58415_c0_g1_i2 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30263; FTRINITY_DN58415_c0_g1_i3 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30261; FTRINITY_DN58415_c0_g1_i1 302 323 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30269; FTRINITY_DN58415_c0_g1_i8 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30279; FTRINITY_DN58415_c0_g1_i16 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30267; FTRINITY_DN58415_c0_g1_i6 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30283; FTRINITY_DN58415_c0_g1_i20 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30278; FTRINITY_DN58415_c0_g1_i15 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30268; FTRINITY_DN58415_c0_g1_i7 654 675 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30272; FTRINITY_DN58415_c0_g1_i11 1270 1291 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30274; FTRINITY_DN58415_c0_g1_i12 1270 1291 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_187277; FTRINITY_DN51830_c0_g1_i2 294 315 TGATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_106223; FTRINITY_DN52986_c4_g1_i8 993 1014 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106219; FTRINITY_DN52986_c4_g1_i4 1185 1206 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106216; FTRINITY_DN52986_c4_g1_i1 1368 1389 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106221; FTRINITY_DN52986_c4_g1_i6 2815 2836 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_67456; FTRINITY_DN55018_c1_g4_i4 407 428 TTATGACGGAGGGTTAGAGAGG BLAST psRNATarget
Ll_transcript_106218; FTRINITY_DN52986_c4_g1_i3 2815 2836 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106224; FTRINITY_DN52986_c4_g1_i9 2815 2836 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_67436; FTRINITY_DN55018_c1_g4_i1 551 572 TTATGACGGAGGGTTAGAGAGG BLAST psRNATarget
Ll_transcript_106220; FTRINITY_DN52986_c4_g1_i5 3190 3211 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_264896; FTRINITY_DN28559_c0_g1_i1 133 154 TCATGATAAGAGCTTAGAGGGA BLAST psRNATarget
Ll_transcript_248284; FTRINITY_DN55928_c2_g5_i1 69 90 GGGAGGTAGAAGCGTAGAGAGC BLAST psRNATarget
Ll_transcript_30577; FTRINITY_DN58431_c0_g2_i10 746 767 TGTTGAAAGAAGTTTAGGGGGG BLAST psRNATarget
Ll_transcript_362027; TRINITY_DN48481_c1_g1_i17 564 585 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_362016; TRINITY_DN48481_c1_g1_i8 580 601 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_362009; TRINITY_DN48481_c1_g1_i6 695 716 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_362002; TRINITY_DN48481_c1_g1_i3 918 939 TGCTGACCAAAGCTTAGAGAGC BLAST psRNATarget
Ll_transcript_296104; TRINITY_DN51781_c0_g1_i5 1450 1471 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_296120; TRINITY_DN51781_c0_g1_i19 1510 1531 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_296105; TRINITY_DN51781_c0_g1_i6 1558 1579 AAAGGGCAGAGGCTTAGAGAGT BLAST psRNATarget
Ll_transcript_342490; TRINITY_DN49842_c0_g1_i6 947 968 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342487; TRINITY_DN49842_c0_g1_i5 1013 1034 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342477; TRINITY_DN49842_c0_g1_i1 1013 1034 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342492; TRINITY_DN49842_c0_g2_i9 1249 1270 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342493; TRINITY_DN49842_c0_g1_i8 1115 1136 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342483; TRINITY_DN49842_c0_g1_i4 1013 1034 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342501; TRINITY_DN49842_c0_g1_i12 1115 1136 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342500; TRINITY_DN49842_c0_g2_i12 1249 1270 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342486; TRINITY_DN49842_c0_g2_i6 1249 1270 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342497; TRINITY_DN49842_c0_g2_i11 1249 1270 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_342484; TRINITY_DN49842_c0_g2_i4 1249 1270 TTTTGACAGGAGCTTAGGGGGG BLAST psRNATarget
Ll_transcript_324010; TRINITY_DN45359_c0_g3_i3 188 209 TGATGATGGAAGCATAGAGAGT BLAST psRNATarget
Ll_transcript_324011; TRINITY_DN45359_c0_g3_i4 188 209 TGATGATGGAAGCATAGAGAGT BLAST psRNATarget
Ll_transcript_458222; TRINITY_DN49966_c0_g5_i1 326 347 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_331270; TRINITY_DN49036_c3_g1_i1 1280 1301 TTGTGATAGAGGTTTAGAGGGA BLAST psRNATarget
Ll_transcript_304891; TRINITY_DN52228_c2_g1_i11 365 386 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304906; TRINITY_DN52228_c2_g1_i23 365 386 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304902; TRINITY_DN52228_c2_g1_i20 771 792 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304896; TRINITY_DN52228_c2_g1_i16 771 792 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304882; TRINITY_DN52228_c2_g1_i2 663 684 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304892; TRINITY_DN52228_c2_g1_i12 715 736 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304910; TRINITY_DN52228_c2_g1_i27 758 779 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304890; TRINITY_DN52228_c2_g1_i10 663 684 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304903; TRINITY_DN52228_c2_g1_i21 663 684 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304881; TRINITY_DN52228_c2_g1_i1 715 736 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_304908; TRINITY_DN52228_c2_g1_i25 663 684 TGTTTACGGGAGCTTAGGGAGT BLAST psRNATarget
Ll_transcript_530169; TRINITY_DN51069_c5_g2_i3 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530174; TRINITY_DN51069_c5_g2_i5 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530164; TRINITY_DN51069_c5_g2_i2 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530162; TRINITY_DN51069_c5_g2_i1 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530176; TRINITY_DN51069_c5_g2_i6 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530170; TRINITY_DN51069_c5_g2_i4 712 733 TAATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_421232; TRINITY_DN48778_c0_g1_i1 276 297 TAATCAGAGAAGCTTAGAGGGT BLAST psRNATarget
Ll_transcript_324007; TRINITY_DN45359_c0_g3_i2 227 248 TGATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_324006; TRINITY_DN45359_c0_g3_i1 227 248 TGATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_342732; TRINITY_DN49868_c3_g1_i6 1032 1053 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_335363; TRINITY_DN44737_c0_g1_i1 399 420 TTATGACGGAGGGTTAGAGAGG BLAST psRNATarget
Ll_transcript_335370; TRINITY_DN44737_c0_g1_i3 540 561 TTATGACGGAGGGTTAGAGAGG BLAST psRNATarget
Ll_transcript_342729; TRINITY_DN49868_c3_g1_i3 2848 2869 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342733; TRINITY_DN49868_c3_g1_i7 2848 2869 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342728; TRINITY_DN49868_c3_g1_i2 2848 2869 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342731; TRINITY_DN49868_c3_g1_i5 2879 2900 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342735; TRINITY_DN49868_c3_g1_i9 2937 2958 CGAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_465762; TRINITY_DN49290_c0_g3_i1 547 568 TGTTGCCAGAAGTTGAGGGAGC BLAST psRNATarget
Ll_transcript_458857; TRINITY_DN25342_c0_g1_i1 251 272 TGTTGCCAGAAGCTGAGGGGGC BLAST psRNATarget
Ll_transcript_350807; TRINITY_DN52499_c0_g1_i3 54 75 GGGAGGTAGAAGCGTAGAGAGC BLAST psRNATarget
Ll_transcript_465770; TRINITY_DN49290_c0_g3_i2 547 568 TGTTGCCAGAAGTTGAGGGAGC BLAST psRNATarget

Expression of miRNA 162


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)