miRNA 163 details

Id Micro163
SequenceGCTCTCTAGACTTCTGTCATC 
Annotated namesmtr-miR156g-3p; 
Annotated pre-miRNANone

Targets of miRNA 163

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_152676; FTRINITY_DN51669_c1_g3_i2 806 826 TCTTATAGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_152674; FTRINITY_DN51669_c1_g3_i1 891 911 TCTTATAGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_228157; FTRINITY_DN52772_c1_g5_i1 402 422 TGTGACACAGGTCTAGAGGGT BLAST psRNATarget
Ll_transcript_187277; FTRINITY_DN51830_c0_g1_i2 295 315 GATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_211127; FTRINITY_DN58394_c1_g1_i1 44 64 AATGGCAGAAGTCAAGAGAGG BLAST psRNATarget
Ll_transcript_60661; FTRINITY_DN56287_c0_g2_i7 1923 1943 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_60656; FTRINITY_DN56287_c0_g2_i2 1923 1943 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_60659; FTRINITY_DN56287_c0_g2_i5 1923 1943 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_60660; FTRINITY_DN56287_c0_g2_i6 2024 2044 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_60657; FTRINITY_DN56287_c0_g2_i3 1923 1943 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_19431; FTRINITY_DN54599_c6_g1_i1 413 433 AATGAGAGAAGTCTAGGGAAC BLAST psRNATarget
Ll_transcript_10148; FTRINITY_DN56866_c1_g2_i2 837 857 AGTTACAGAAGTTGAGAGAGC BLAST psRNATarget
Ll_transcript_10146; FTRINITY_DN56866_c1_g2_i1 837 857 AGTTACAGAAGTTGAGAGAGC BLAST psRNATarget
Ll_transcript_253432; FTRINITY_DN52529_c2_g1_i1 926 946 GGTTTCAAAAGTCTAGAGAGC BLAST psRNATarget
Ll_transcript_86895; FTRINITY_DN52460_c0_g1_i2 1543 1563 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_86896; FTRINITY_DN52460_c0_g1_i3 1619 1639 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_86897; FTRINITY_DN52460_c0_g1_i4 1736 1756 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_86900; FTRINITY_DN52460_c0_g1_i6 1947 1967 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_106223; FTRINITY_DN52986_c4_g1_i8 994 1014 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106219; FTRINITY_DN52986_c4_g1_i4 1186 1206 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106216; FTRINITY_DN52986_c4_g1_i1 1369 1389 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106221; FTRINITY_DN52986_c4_g1_i6 2816 2836 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106218; FTRINITY_DN52986_c4_g1_i3 2816 2836 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106224; FTRINITY_DN52986_c4_g1_i9 2816 2836 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_106220; FTRINITY_DN52986_c4_g1_i5 3191 3211 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_131938; FTRINITY_DN57588_c2_g1_i13 3291 3311 CATGGTAGTGGTCTAGGGAGC BLAST psRNATarget
Ll_transcript_131920; FTRINITY_DN57588_c2_g1_i5 3980 4000 CATGGTAGTGGTCTAGGGAGC BLAST psRNATarget
Ll_transcript_141049; FTRINITY_DN54025_c1_g8_i1 264 284 GCTGATAGAAGACTAGAAAGC BLAST psRNATarget
Ll_transcript_130758; FTRINITY_DN57516_c0_g1_i4 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_130763; FTRINITY_DN57516_c0_g1_i9 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_130764; FTRINITY_DN57516_c0_g1_i10 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_30265; FTRINITY_DN58415_c0_g1_i4 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_130767; FTRINITY_DN57516_c0_g1_i13 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_30266; FTRINITY_DN58415_c0_g1_i5 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_130774; FTRINITY_DN57516_c0_g1_i19 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_130768; FTRINITY_DN57516_c0_g1_i14 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_30275; FTRINITY_DN58415_c0_g1_i13 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30276; FTRINITY_DN58415_c0_g1_i14 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30270; FTRINITY_DN58415_c0_g1_i9 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30281; FTRINITY_DN58415_c0_g1_i18 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30271; FTRINITY_DN58415_c0_g1_i10 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_130757; FTRINITY_DN57516_c0_g1_i3 614 634 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_30282; FTRINITY_DN58415_c0_g1_i19 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30262; FTRINITY_DN58415_c0_g1_i2 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30263; FTRINITY_DN58415_c0_g1_i3 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30261; FTRINITY_DN58415_c0_g1_i1 303 323 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30269; FTRINITY_DN58415_c0_g1_i8 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30279; FTRINITY_DN58415_c0_g1_i16 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30267; FTRINITY_DN58415_c0_g1_i6 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30283; FTRINITY_DN58415_c0_g1_i20 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30278; FTRINITY_DN58415_c0_g1_i15 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30268; FTRINITY_DN58415_c0_g1_i7 655 675 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30272; FTRINITY_DN58415_c0_g1_i11 1271 1291 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_30274; FTRINITY_DN58415_c0_g1_i12 1271 1291 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_180871; FTRINITY_DN53550_c0_g1_i1 1677 1697 GATAAATGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_80183; FTRINITY_DN58121_c0_g4_i2 415 435 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_97096; FTRINITY_DN47601_c2_g1_i1 198 218 AACTACAAAAGTCTAGAGGGC BLAST psRNATarget
Ll_transcript_162339; FTRINITY_DN53241_c0_g2_i1 168 188 AATTATAAAAGTTTAGAGAGT BLAST psRNATarget
Ll_transcript_139395; FTRINITY_DN55284_c2_g1_i12 2009 2029 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_139390; FTRINITY_DN55284_c2_g1_i7 2158 2178 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_139388; FTRINITY_DN55284_c2_g1_i5 2172 2192 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_139389; FTRINITY_DN55284_c2_g1_i6 2321 2341 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_139403; FTRINITY_DN55284_c2_g1_i20 2482 2502 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_425877; TRINITY_DN45565_c0_g5_i3 898 918 TCTTATAGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_425878; TRINITY_DN45565_c0_g5_i4 898 918 TCTTATAGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_526060; TRINITY_DN47583_c3_g2_i1 360 380 TGTGACACAGGTCTAGAGGGT BLAST psRNATarget
Ll_transcript_324007; TRINITY_DN45359_c0_g3_i2 228 248 GATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_324006; TRINITY_DN45359_c0_g3_i1 228 248 GATGATGGAAGTATAGAGAGT BLAST psRNATarget
Ll_transcript_458578; TRINITY_DN49970_c0_g1_i5 1862 1882 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_458577; TRINITY_DN49970_c0_g1_i4 1862 1882 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_458576; TRINITY_DN49970_c0_g1_i3 1862 1882 TATGACAGAAGTCTGGGAAGT BLAST psRNATarget
Ll_transcript_331270; TRINITY_DN49036_c3_g1_i1 1281 1301 TGTGATAGAGGTTTAGAGGGA BLAST psRNATarget
Ll_transcript_291851; TRINITY_DN49170_c1_g2_i1 837 857 AGTTACAGAAGTTGAGAGAGC BLAST psRNATarget
Ll_transcript_476266; TRINITY_DN47487_c1_g2_i5 1744 1764 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_476282; TRINITY_DN47487_c1_g2_i11 1953 1973 CTTGATTGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_431054; TRINITY_DN52197_c0_g1_i4 3735 3755 ATTGAAAGAAGTCAAGAGAGT BLAST psRNATarget
Ll_transcript_431057; TRINITY_DN52197_c0_g1_i7 3735 3755 ATTGAAAGAAGTCAAGAGAGT BLAST psRNATarget
Ll_transcript_342732; TRINITY_DN49868_c3_g1_i6 1033 1053 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342729; TRINITY_DN49868_c3_g1_i3 2849 2869 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342733; TRINITY_DN49868_c3_g1_i7 2849 2869 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342728; TRINITY_DN49868_c3_g1_i2 2849 2869 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342731; TRINITY_DN49868_c3_g1_i5 2880 2900 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_342735; TRINITY_DN49868_c3_g1_i9 2938 2958 GAAGACAGGAGTTTGGAGAGA BLAST psRNATarget
Ll_transcript_295634; TRINITY_DN51712_c1_g1_i5 4556 4576 CATGGTAGTGGTCTAGGGAGC BLAST psRNATarget
Ll_transcript_295641; TRINITY_DN51712_c1_g1_i10 4567 4587 CATGGTAGTGGTCTAGGGAGC BLAST psRNATarget
Ll_transcript_295646; TRINITY_DN51712_c1_g1_i14 5007 5027 CATGGTAGTGGTCTAGGGAGC BLAST psRNATarget
Ll_transcript_409052; TRINITY_DN51655_c0_g1_i7 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_409061; TRINITY_DN51655_c0_g1_i16 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_409067; TRINITY_DN51655_c0_g1_i22 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_409041; TRINITY_DN51655_c0_g1_i1 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_530169; TRINITY_DN51069_c5_g2_i3 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_409065; TRINITY_DN51655_c0_g1_i20 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_409066; TRINITY_DN51655_c0_g1_i21 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_409051; TRINITY_DN51655_c0_g1_i6 616 636 CATGAGAGGATTCTGGAGAGC BLAST psRNATarget
Ll_transcript_530174; TRINITY_DN51069_c5_g2_i5 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530164; TRINITY_DN51069_c5_g2_i2 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530162; TRINITY_DN51069_c5_g2_i1 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530176; TRINITY_DN51069_c5_g2_i6 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_530170; TRINITY_DN51069_c5_g2_i4 713 733 AATGATAAAAGATTAGAGAGC BLAST psRNATarget
Ll_transcript_383725; TRINITY_DN47277_c0_g1_i1 1630 1650 GATAAATGAAGTCTAGAGAGT BLAST psRNATarget
Ll_transcript_446008; TRINITY_DN51827_c0_g2_i1 1966 1986 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446038; TRINITY_DN51827_c0_g2_i29 2133 2153 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_438996; TRINITY_DN48358_c2_g3_i10 218 238 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_446044; TRINITY_DN51827_c0_g2_i35 2218 2238 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446021; TRINITY_DN51827_c0_g2_i13 2227 2247 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446037; TRINITY_DN51827_c0_g2_i28 2249 2269 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446042; TRINITY_DN51827_c0_g2_i33 2312 2332 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446030; TRINITY_DN51827_c0_g2_i21 2334 2354 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446009; TRINITY_DN51827_c0_g2_i2 2428 2448 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_438981; TRINITY_DN48358_c2_g3_i2 288 308 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_446012; TRINITY_DN51827_c0_g2_i5 1993 2013 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446047; TRINITY_DN51827_c0_g2_i38 1993 2013 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446014; TRINITY_DN51827_c0_g2_i7 2131 2151 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_422112; TRINITY_DN47972_c4_g1_i1 133 153 AATGAATGAAGTTTGGAGAGT BLAST psRNATarget
Ll_transcript_446010; TRINITY_DN51827_c0_g2_i3 2131 2151 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_446017; TRINITY_DN51827_c0_g2_i10 2131 2151 GCCGACAGAGGTCTGGAAAGC BLAST psRNATarget
Ll_transcript_438994; TRINITY_DN48358_c2_g3_i9 1052 1072 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438982; TRINITY_DN48358_c2_g3_i3 1554 1574 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438999; TRINITY_DN48358_c2_g3_i11 1721 1741 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438986; TRINITY_DN48358_c2_g3_i5 2040 2060 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438992; TRINITY_DN48358_c2_g3_i8 2158 2178 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438978; TRINITY_DN48358_c2_g3_i1 2040 2060 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_438985; TRINITY_DN48358_c2_g3_i4 2158 2178 TCTGATGGAAGTTTAGAGCGT BLAST psRNATarget
Ll_transcript_401269; TRINITY_DN16442_c0_g1_i1 179 199 ATTTATGGGAGTCTAGAGAGA BLAST psRNATarget

Expression of miRNA 163


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)