miRNA 185 details

Id Micro185
SequenceGGGGCGAACTGAGAACACATG 
Annotated nameszma-miR398a-5p; 
Annotated pre-miRNANone

Targets of miRNA 185

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_40788; FTRINITY_DN46769_c0_g1_i1 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_40789; FTRINITY_DN46769_c0_g1_i2 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_256041; FTRINITY_DN59194_c1_g2_i1 105 125 TGTGTGTTTTCAGTTTGCTTC BLAST psRNATarget
Ll_transcript_166962; FTRINITY_DN57322_c0_g3_i3 3504 3524 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_44478; FTRINITY_DN54194_c0_g4_i5 4004 4024 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_44490; FTRINITY_DN54194_c0_g4_i9 4341 4361 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_44484; FTRINITY_DN54194_c0_g4_i7 4425 4445 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_31465; FTRINITY_DN58410_c0_g1_i7 704 724 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_146715; FTRINITY_DN59018_c2_g1_i15 2241 2261 CCTGTGTTTTCAGTTAGTTCC BLAST psRNATarget
Ll_transcript_99040; FTRINITY_DN57181_c0_g1_i17 3352 3372 TACGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_31471; FTRINITY_DN58410_c0_g1_i13 2011 2031 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_31462; FTRINITY_DN58410_c0_g1_i4 2024 2044 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_31459; FTRINITY_DN58410_c0_g1_i1 2011 2031 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_99035; FTRINITY_DN57181_c0_g1_i12 3954 3974 TACGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_111414; FTRINITY_DN55488_c11_g2_i1 160 180 TTTGTGTTCTCAGGTCACCCC BLAST psRNATarget
Ll_transcript_59297; FTRINITY_DN56254_c4_g2_i2 247 267 TCTGTGTTTTCATTTTGTCCC BLAST psRNATarget
Ll_transcript_59294; FTRINITY_DN56254_c4_g2_i1 247 267 TCTGTGTTTTCATTTTGTCCC BLAST psRNATarget
Ll_transcript_59304; FTRINITY_DN56254_c4_g2_i3 247 267 TCTGTGTTTTCATTTTGTCCC BLAST psRNATarget
Ll_transcript_44854; FTRINITY_DN54102_c0_g1_i1 283 303 TGTCTGTACTCAGTTTGCCCT BLAST psRNATarget
Ll_transcript_99022; FTRINITY_DN57181_c0_g1_i1 2061 2081 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_99024; FTRINITY_DN57181_c0_g1_i3 3011 3031 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_99029; FTRINITY_DN57181_c0_g1_i8 3049 3069 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_99043; FTRINITY_DN57181_c0_g1_i20 3100 3120 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_100955; FTRINITY_DN57162_c1_g9_i1 79 99 CTTGGATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_178978; FTRINITY_DN58627_c3_g6_i4 399 419 TATGTTTTTTCAGTTTGTCCA BLAST psRNATarget
Ll_transcript_239752; FTRINITY_DN20601_c0_g1_i1 255 275 AATGTGTTTGCAGTTTGCCTT BLAST psRNATarget
Ll_transcript_133082; FTRINITY_DN57535_c1_g4_i1 348 368 TATGTCTTTTCAGTTCGTTTT BLAST psRNATarget
Ll_transcript_187428; FTRINITY_DN51837_c0_g1_i4 614 634 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_187426; FTRINITY_DN51837_c0_g1_i2 614 634 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_187427; FTRINITY_DN51837_c0_g1_i3 650 670 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_187429; FTRINITY_DN51837_c0_g1_i5 775 795 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_187425; FTRINITY_DN51837_c0_g1_i1 775 795 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_68753; FTRINITY_DN55020_c1_g1_i1 186 205 CATGTGTCTCAGTTTGCCTT BLAST psRNATarget
Ll_transcript_127554; FTRINITY_DN53439_c0_g1_i2 444 464 AATGTGATTTTAGTTTGCCTT BLAST psRNATarget
Ll_transcript_12373; FTRINITY_DN51398_c0_g2_i1 1164 1184 GATATGTTTTCAGTTCTTCCC BLAST psRNATarget
Ll_transcript_268661; FTRINITY_DN55897_c2_g2_i1 2862 2882 AATGTGATCTCAGTTTGTTTT BLAST psRNATarget
Ll_transcript_199165; FTRINITY_DN49986_c0_g1_i1 255 275 TGTGTGGTTTCAGGTTGCCCC BLAST psRNATarget
Ll_transcript_105665; FTRINITY_DN52968_c3_g1_i5 1093 1113 CTTGTGTTTTCTGTTTGCCTT BLAST psRNATarget
Ll_transcript_236889; FTRINITY_DN54456_c0_g1_i9 1041 1061 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236900; FTRINITY_DN54456_c0_g1_i20 1103 1123 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_52229; FTRINITY_DN58872_c1_g1_i1 484 504 TGTGTTTTCTTATTTTGCCCC BLAST psRNATarget
Ll_transcript_105656; FTRINITY_DN52968_c3_g1_i1 1566 1586 CTTGTGTTTTCTGTTTGCCTT BLAST psRNATarget
Ll_transcript_236896; FTRINITY_DN54456_c0_g1_i16 1342 1362 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236884; FTRINITY_DN54456_c0_g1_i4 1443 1463 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236888; FTRINITY_DN54456_c0_g1_i8 1653 1673 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236898; FTRINITY_DN54456_c0_g1_i18 1744 1764 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236893; FTRINITY_DN54456_c0_g1_i13 1845 1865 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236904; FTRINITY_DN54456_c0_g1_i24 1959 1979 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_236899; FTRINITY_DN54456_c0_g1_i19 2055 2075 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_179745; FTRINITY_DN21019_c0_g2_i1 308 328 ACTGTGTTATTGGTTTGCCTC BLAST psRNATarget
Ll_transcript_111917; FTRINITY_DN55441_c2_g2_i14 382 402 GCTGTGTTCTTGGTTCACCTT BLAST psRNATarget
Ll_transcript_17922; FTRINITY_DN54517_c1_g2_i2 459 479 TTTGTGTTCTTGGTTCGGTTC BLAST psRNATarget
Ll_transcript_17910; FTRINITY_DN54517_c1_g2_i1 459 479 TTTGTGTTCTTGGTTCGGTTC BLAST psRNATarget
Ll_transcript_159980; FTRINITY_DN54765_c4_g3_i3 901 921 ACTGTGTTTTTAGTTCTCTTC BLAST psRNATarget
Ll_transcript_134647; FTRINITY_DN58085_c0_g1_i8 1769 1789 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_134648; FTRINITY_DN58085_c0_g1_i9 2064 2084 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_134635; FTRINITY_DN58085_c0_g1_i6 2064 2084 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_422605; TRINITY_DN47985_c1_g3_i4 127 147 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_322986; TRINITY_DN38895_c0_g1_i1 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_422599; TRINITY_DN47985_c1_g3_i1 127 147 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_322987; TRINITY_DN38895_c0_g1_i2 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_452102; TRINITY_DN40791_c0_g2_i2 148 168 TGTGTGTTTTCAGTTTGCTTC BLAST psRNATarget
Ll_transcript_422603; TRINITY_DN47985_c1_g3_i3 127 147 CACGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_515609; TRINITY_DN50837_c1_g2_i3 223 243 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_515603; TRINITY_DN50837_c1_g2_i1 102 122 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_515611; TRINITY_DN50837_c1_g2_i5 223 243 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_422598; TRINITY_DN47985_c1_g2_i1 2261 2281 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_422607; TRINITY_DN47985_c1_g2_i3 2472 2492 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_422602; TRINITY_DN47985_c1_g2_i2 3203 3223 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_350436; TRINITY_DN52441_c0_g3_i1 786 806 TATGTGTTTTCAGTTCATTCC BLAST psRNATarget
Ll_transcript_469953; TRINITY_DN45470_c0_g1_i2 1314 1334 CCTGTGTTTTCAGTTAGTTCC BLAST psRNATarget
Ll_transcript_431829; TRINITY_DN52106_c1_g2_i3 666 686 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_431827; TRINITY_DN52106_c1_g2_i2 666 686 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_431840; TRINITY_DN52106_c1_g2_i7 666 686 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_431834; TRINITY_DN52106_c1_g2_i4 666 686 TATGAATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_288317; TRINITY_DN51344_c0_g1_i6 4470 4490 TACGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_288334; TRINITY_DN51344_c0_g1_i11 4481 4501 TACGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_402321; TRINITY_DN50568_c6_g1_i1 235 255 TCTGTGTTTTCATTTTGTCCC BLAST psRNATarget
Ll_transcript_453984; TRINITY_DN49705_c1_g1_i1 194 214 TTTGTGTTCTCAGGTCACCCC BLAST psRNATarget
Ll_transcript_287776; TRINITY_DN51349_c1_g2_i12 1508 1528 TGTCTGTACTCAGTTTGCCCT BLAST psRNATarget
Ll_transcript_288306; TRINITY_DN51344_c0_g1_i1 3067 3087 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_288321; TRINITY_DN51344_c0_g1_i8 3179 3199 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_288316; TRINITY_DN51344_c0_g1_i5 3190 3210 TTCGTGCTCTCAGTTCGCTCT BLAST psRNATarget
Ll_transcript_279047; TRINITY_DN50131_c1_g2_i1 303 323 CTTGGATTCTCAGTTTGTCCC BLAST psRNATarget
Ll_transcript_300785; TRINITY_DN51599_c4_g3_i3 1348 1368 AATGTGTTTGCAGTTTGCCTT BLAST psRNATarget
Ll_transcript_300765; TRINITY_DN51599_c4_g3_i1 5720 5740 AATGTGTTTGCAGTTTGCCTT BLAST psRNATarget
Ll_transcript_324797; TRINITY_DN38452_c0_g3_i1 326 346 TGTGTGTTTTCGGTACGTCCT BLAST psRNATarget
Ll_transcript_378961; TRINITY_DN50770_c0_g1_i28 606 626 TATGTCTTTTCAGTTCGTTTT BLAST psRNATarget
Ll_transcript_378933; TRINITY_DN50770_c0_g1_i4 606 626 TATGTCTTTTCAGTTCGTTTT BLAST psRNATarget
Ll_transcript_511866; TRINITY_DN46857_c3_g3_i2 1225 1245 GATATGTTTTCAGTTCTTCCC BLAST psRNATarget
Ll_transcript_511869; TRINITY_DN46857_c3_g3_i3 1225 1245 GATATGTTTTCAGTTCTTCCC BLAST psRNATarget
Ll_transcript_499194; TRINITY_DN50241_c5_g1_i8 2736 2756 AATGTGATCTCAGTTTGTTTT BLAST psRNATarget
Ll_transcript_420368; TRINITY_DN48756_c0_g1_i1 106 126 CTTGTGTTTTCTGTTTGCTCT BLAST psRNATarget
Ll_transcript_410757; TRINITY_DN51668_c3_g1_i1 488 508 TGTGTTTTCTTATTTTGCCCC BLAST psRNATarget
Ll_transcript_304272; TRINITY_DN48263_c2_g2_i2 572 592 CTTGTGTTTTCTGTTTGCCTT BLAST psRNATarget
Ll_transcript_304282; TRINITY_DN48263_c2_g2_i4 1103 1123 CTTGTGTTTTCTGTTTGCCTT BLAST psRNATarget
Ll_transcript_304278; TRINITY_DN48263_c2_g2_i3 1206 1226 CTTGTGTTTTCTGTTTGCCTT BLAST psRNATarget
Ll_transcript_413899; TRINITY_DN49646_c0_g2_i3 1337 1357 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413919; TRINITY_DN49646_c0_g2_i14 1428 1448 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413912; TRINITY_DN49646_c0_g2_i9 1438 1458 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413915; TRINITY_DN49646_c0_g2_i12 1529 1549 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413910; TRINITY_DN49646_c0_g2_i8 1557 1577 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413923; TRINITY_DN49646_c0_g2_i17 1648 1668 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413914; TRINITY_DN49646_c0_g2_i11 1739 1759 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413906; TRINITY_DN49646_c0_g2_i6 1840 1860 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413898; TRINITY_DN49646_c0_g2_i2 1931 1951 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413901; TRINITY_DN49646_c0_g2_i4 1959 1979 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_413920; TRINITY_DN49646_c0_g2_i15 2050 2070 TGTCTGTTTTTAGTTTGTCTC BLAST psRNATarget
Ll_transcript_355368; TRINITY_DN49448_c0_g1_i4 405 425 GCTGTGTTCTTGGTTCACCTT BLAST psRNATarget
Ll_transcript_439390; TRINITY_DN48396_c0_g2_i2 433 453 TTTGTGTTCTTGGTTCGGTTC BLAST psRNATarget
Ll_transcript_490403; TRINITY_DN50340_c0_g1_i11 1212 1232 ACTGTGTTTTTAGTTCTCTTC BLAST psRNATarget
Ll_transcript_490402; TRINITY_DN50340_c0_g1_i10 1249 1269 ACTGTGTTTTTAGTTCTCTTC BLAST psRNATarget
Ll_transcript_484873; TRINITY_DN49329_c2_g1_i14 615 635 ACTGTGTTATTGGTTTGCCTC BLAST psRNATarget
Ll_transcript_355379; TRINITY_DN49448_c0_g1_i10 1505 1525 GCTGTGTTCTTGGTTCACCTT BLAST psRNATarget
Ll_transcript_355376; TRINITY_DN49448_c0_g1_i8 2053 2073 GCTGTGTTCTTGGTTCACCTT BLAST psRNATarget
Ll_transcript_459931; TRINITY_DN51199_c0_g1_i7 645 665 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_459929; TRINITY_DN51199_c0_g1_i5 694 714 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_459930; TRINITY_DN51199_c0_g1_i6 2064 2084 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget
Ll_transcript_459933; TRINITY_DN51199_c0_g1_i9 2064 2084 GGTGTTTTCTCAGTTCCTCCT BLAST psRNATarget

Expression of miRNA 185


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)