miRNA 19 details

Id Micro19
SequenceACTCATAAGATCGTGACACGT 
Annotated namesath-miR5026; 
Annotated pre-miRNANone

Targets of miRNA 19

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_98263; FTRINITY_DN57107_c1_g5_i13 2230 2250 AAGTTTCGCGATCTTGTGAGT BLAST psRNATarget
Ll_transcript_98239; FTRINITY_DN57107_c1_g5_i3 2385 2405 AAGTTTCGCGATCTTGTGAGT BLAST psRNATarget
Ll_transcript_123269; FTRINITY_DN53766_c4_g1_i1 442 462 ATGTGTCATGATCTTGTGATT BLAST psRNATarget
Ll_transcript_123271; FTRINITY_DN53766_c4_g1_i2 500 520 ATGTGTCATGATCTTGTGATT BLAST psRNATarget
Ll_transcript_207231; FTRINITY_DN52693_c2_g1_i1 1947 1967 ATGTGTCACTTTCTTATGAGT BLAST psRNATarget
Ll_transcript_143194; FTRINITY_DN54032_c4_g1_i6 757 777 ATGTGTCATGGTCTTGTGATT BLAST psRNATarget
Ll_transcript_143188; FTRINITY_DN54032_c4_g1_i2 757 777 ATGTGTCATGGTCTTGTGATT BLAST psRNATarget
Ll_transcript_116394; FTRINITY_DN77962_c0_g1_i1 275 295 ATGGGTCATGATTTTGTGGGT BLAST psRNATarget
Ll_transcript_22734; FTRINITY_DN7276_c0_g1_i1 362 382 TTGTGTTATTATTTTATGAGT BLAST psRNATarget
Ll_transcript_13965; FTRINITY_DN59265_c1_g1_i6 775 795 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13959; FTRINITY_DN59265_c1_g1_i3 839 859 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13972; FTRINITY_DN59265_c1_g1_i11 1085 1105 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_206657; FTRINITY_DN75502_c0_g1_i1 321 341 TTGTGACATGATGTTATGAGT BLAST psRNATarget
Ll_transcript_129485; FTRINITY_DN53468_c2_g1_i6 163 183 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129487; FTRINITY_DN53468_c2_g1_i8 1487 1507 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129477; FTRINITY_DN53468_c2_g1_i1 1577 1597 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129492; FTRINITY_DN53468_c2_g1_i13 1592 1612 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129489; FTRINITY_DN53468_c2_g1_i10 1612 1632 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129480; FTRINITY_DN53468_c2_g1_i3 1682 1702 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_129493; FTRINITY_DN53468_c2_g1_i14 1702 1722 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_166267; FTRINITY_DN57326_c0_g1_i1 2013 2033 ACGTGTTGCTATTTTATGGGT BLAST psRNATarget
Ll_transcript_112388; FTRINITY_DN55419_c0_g4_i1 73 93 ATGTGTTGTTATTTTATGAGT BLAST psRNATarget
Ll_transcript_189545; FTRINITY_DN56785_c1_g1_i2 1052 1072 TCGTGACACGATCTTATGAAA BLAST psRNATarget
Ll_transcript_162894; FTRINITY_DN53263_c2_g1_i1 543 563 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_162904; FTRINITY_DN53263_c2_g1_i4 558 578 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_189546; FTRINITY_DN56785_c1_g1_i3 1147 1167 TCGTGACACGATCTTATGAAA BLAST psRNATarget
Ll_transcript_162901; FTRINITY_DN53263_c2_g1_i2 710 730 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_162903; FTRINITY_DN53263_c2_g1_i3 824 844 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_189547; FTRINITY_DN56785_c1_g1_i4 1539 1559 TCGTGACACGATCTTATGAAA BLAST psRNATarget
Ll_transcript_227911; FTRINITY_DN52716_c3_g7_i1 56 76 ATGTGCCATGGTCTTATGATT BLAST psRNATarget
Ll_transcript_44898; FTRINITY_DN54120_c0_g4_i2 772 792 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_44916; FTRINITY_DN54120_c0_g4_i5 861 881 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_44919; FTRINITY_DN54120_c0_g4_i6 1585 1605 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_240233; FTRINITY_DN50221_c1_g1_i5 842 862 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_268081; FTRINITY_DN55852_c2_g3_i2 1661 1681 TTGTGTTATGAGTTTGTGAGT BLAST psRNATarget
Ll_transcript_268065; FTRINITY_DN55852_c2_g3_i1 1961 1981 TTGTGTTATGAGTTTGTGAGT BLAST psRNATarget
Ll_transcript_240232; FTRINITY_DN50221_c1_g1_i4 1244 1264 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_268087; FTRINITY_DN55852_c2_g3_i3 2041 2061 TTGTGTTATGAGTTTGTGAGT BLAST psRNATarget
Ll_transcript_240237; FTRINITY_DN50221_c1_g1_i9 2202 2222 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_240230; FTRINITY_DN50221_c1_g1_i2 2718 2738 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_240236; FTRINITY_DN50221_c1_g1_i8 2736 2756 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_240235; FTRINITY_DN50221_c1_g1_i7 3425 3445 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_240231; FTRINITY_DN50221_c1_g1_i3 3694 3714 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_30729; FTRINITY_DN58438_c0_g3_i5 232 252 ATGAGTAATGATTTTATGGGT BLAST psRNATarget
Ll_transcript_13971; FTRINITY_DN59265_c1_g1_i10 503 523 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13985; FTRINITY_DN59265_c1_g1_i17 916 936 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13967; FTRINITY_DN59265_c1_g1_i8 924 944 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13977; FTRINITY_DN59265_c1_g1_i13 988 1008 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13970; FTRINITY_DN59265_c1_g1_i9 1093 1113 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_13976; FTRINITY_DN59265_c1_g1_i12 1282 1302 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_110565; FTRINITY_DN55496_c4_g5_i1 1029 1049 TTCTGTCGTCATCTTATGAGT BLAST psRNATarget
Ll_transcript_188174; FTRINITY_DN56718_c1_g2_i16 7 27 TTGAGTTATGATCTTATGGGA BLAST psRNATarget
Ll_transcript_188184; FTRINITY_DN56718_c1_g2_i24 7 27 TTGAGTTATGATCTTATGGGA BLAST psRNATarget
Ll_transcript_233158; FTRINITY_DN50398_c0_g2_i1 212 232 TCATGTGATGATTTTGTGAGT BLAST psRNATarget
Ll_transcript_104988; FTRINITY_DN52908_c2_g1_i1 639 659 TTGTGTAATGATTTTATGAAT BLAST psRNATarget
Ll_transcript_104989; FTRINITY_DN52908_c2_g1_i2 639 659 TTGTGTAATGATTTTATGAAT BLAST psRNATarget
Ll_transcript_72947; FTRINITY_DN56023_c7_g2_i1 321 341 TTGTTTCACAATTTTGTGAGT BLAST psRNATarget
Ll_transcript_9944; FTRINITY_DN56806_c2_g1_i4 1781 1801 CTGAGTTACGATTTTATCAGT BLAST psRNATarget
Ll_transcript_508243; TRINITY_DN48115_c7_g1_i1 795 815 AAGTTTCGCGATCTTGTGAGT BLAST psRNATarget
Ll_transcript_329647; TRINITY_DN49064_c0_g7_i1 465 485 ATGTGTCATGATCTTGTGATT BLAST psRNATarget
Ll_transcript_446176; TRINITY_DN51812_c1_g1_i20 751 771 ATGTGTTATGGTCTTGTGGGT BLAST psRNATarget
Ll_transcript_446159; TRINITY_DN51812_c1_g1_i3 751 771 ATGTGTTATGGTCTTGTGGGT BLAST psRNATarget
Ll_transcript_446183; TRINITY_DN51812_c1_g1_i27 751 771 ATGTGTTATGGTCTTGTGGGT BLAST psRNATarget
Ll_transcript_319790; TRINITY_DN46258_c3_g10_i1 1923 1943 ATGTGTCACTTTCTTATGAGT BLAST psRNATarget
Ll_transcript_327513; TRINITY_DN48049_c0_g3_i4 667 687 ATGTGTCATGGTCTTGTGATT BLAST psRNATarget
Ll_transcript_470285; TRINITY_DN67160_c0_g1_i1 180 200 ATGTGCCAGGATCTTATGGGT BLAST psRNATarget
Ll_transcript_317989; TRINITY_DN74648_c0_g1_i1 139 159 ATGGGTCATGATTTTGTGGGT BLAST psRNATarget
Ll_transcript_325067; TRINITY_DN66962_c0_g1_i1 318 338 CTGTGTTATGATTTTATAAGT BLAST psRNATarget
Ll_transcript_522661; TRINITY_DN46540_c2_g1_i2 1235 1255 TTGTGTTATTATTTTATGAGT BLAST psRNATarget
Ll_transcript_437199; TRINITY_DN48973_c2_g1_i12 352 372 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_437186; TRINITY_DN48973_c2_g1_i7 352 372 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_437197; TRINITY_DN48973_c2_g1_i11 669 689 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_437196; TRINITY_DN48973_c2_g1_i10 923 943 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_437194; TRINITY_DN48973_c2_g1_i9 1937 1957 CTTTGTCATGATCTTATAAGT BLAST psRNATarget
Ll_transcript_527571; TRINITY_DN43372_c0_g1_i2 536 556 TTGTGACATGATGTTATGAGT BLAST psRNATarget
Ll_transcript_394464; TRINITY_DN11495_c0_g1_i1 1274 1293 ATGTATACGATCTTATGAGT BLAST psRNATarget
Ll_transcript_488646; TRINITY_DN50329_c0_g2_i2 775 795 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_488656; TRINITY_DN50329_c0_g2_i3 865 885 ACGTGTCACGATCTTGTTTGT BLAST psRNATarget
Ll_transcript_282780; TRINITY_DN46126_c2_g1_i1 1885 1905 ACGTGTTGCTATTTTATGGGT BLAST psRNATarget
Ll_transcript_426716; TRINITY_DN45531_c3_g3_i1 161 181 ATGTGTCATGAACTTATGATT BLAST psRNATarget
Ll_transcript_334629; TRINITY_DN44248_c0_g1_i5 588 608 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_334630; TRINITY_DN44248_c0_g1_i6 912 932 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_334625; TRINITY_DN44248_c0_g1_i1 957 977 TTGTGTCATGATCTTGTGATG BLAST psRNATarget
Ll_transcript_331867; TRINITY_DN49073_c0_g1_i1 208 228 ATGTGCCATGGTCTTATGATT BLAST psRNATarget
Ll_transcript_468145; TRINITY_DN49295_c3_g5_i2 856 876 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_468160; TRINITY_DN49295_c3_g5_i12 1529 1549 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_468152; TRINITY_DN49295_c3_g5_i6 1721 1741 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_468156; TRINITY_DN49295_c3_g5_i10 1739 1759 TTGTGTCATGGTCTTTTGAGC BLAST psRNATarget
Ll_transcript_521278; TRINITY_DN46554_c0_g3_i2 1590 1610 TTGTGTTATGAGTTTGTGAGT BLAST psRNATarget
Ll_transcript_521267; TRINITY_DN46554_c0_g3_i1 1970 1990 TTGTGTTATGAGTTTGTGAGT BLAST psRNATarget
Ll_transcript_475950; TRINITY_DN47469_c4_g1_i1 1241 1261 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475952; TRINITY_DN47469_c4_g1_i3 1514 1534 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475954; TRINITY_DN47469_c4_g1_i5 1757 1777 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475953; TRINITY_DN47469_c4_g1_i4 2200 2220 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475951; TRINITY_DN47469_c4_g1_i2 2490 2510 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475956; TRINITY_DN47469_c4_g1_i7 2716 2736 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475957; TRINITY_DN47469_c4_g1_i8 2733 2753 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_475955; TRINITY_DN47469_c4_g1_i6 3692 3712 TTGTGTCACCATCTTCTGGGT BLAST psRNATarget
Ll_transcript_437175; TRINITY_DN48973_c2_g1_i5 80 100 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_437174; TRINITY_DN48973_c2_g1_i4 80 100 CTTTGTCGTGATCTTATAAGT BLAST psRNATarget
Ll_transcript_518413; TRINITY_DN51243_c0_g2_i4 289 309 ATGAGTAATGATTTTATGGGT BLAST psRNATarget
Ll_transcript_286262; TRINITY_DN48817_c0_g1_i11 1043 1063 TTCTGTCGTCATCTTATGAGT BLAST psRNATarget
Ll_transcript_296880; TRINITY_DN51723_c2_g4_i1 276 296 TTGAGTTATGATCTTATGGGA BLAST psRNATarget
Ll_transcript_305920; TRINITY_DN52205_c3_g8_i1 316 336 TTGTTTCACAATTTTGTGAGT BLAST psRNATarget
Ll_transcript_305938; TRINITY_DN52205_c3_g8_i2 316 336 TTGTTTCACAATTTTGTGAGT BLAST psRNATarget
Ll_transcript_303194; TRINITY_DN48284_c2_g1_i6 1786 1806 CTGAGTTACGATTTTATCAGT BLAST psRNATarget
Ll_transcript_303180; TRINITY_DN48284_c2_g1_i3 2223 2243 CTGAGTTACGATTTTATCAGT BLAST psRNATarget
Ll_transcript_303191; TRINITY_DN48284_c2_g1_i5 2343 2363 CTGAGTTACGATTTTATCAGT BLAST psRNATarget

Expression of miRNA 19


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)