miRNA 21 details

Id Micro21
SequenceACTGGATGACGCGGGAGCTAA 
Annotated namesata-miR319-3p; osa-miR319a-3p; 
Annotated pre-miRNANone

Targets of miRNA 21

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_213448; FTRINITY_DN45467_c0_g1_i2 17 37 TCCGCGCCCGCGTCATCCGGT BLAST psRNATarget
Ll_transcript_213447; FTRINITY_DN45467_c0_g1_i1 17 37 TCCGCGCCCGCGTCATCCGGT BLAST psRNATarget
Ll_transcript_37971; FTRINITY_DN58920_c0_g1_i4 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37975; FTRINITY_DN58920_c0_g1_i7 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37973; FTRINITY_DN58920_c0_g1_i6 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37972; FTRINITY_DN58920_c0_g1_i5 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37966; FTRINITY_DN58920_c0_g1_i1 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37993; FTRINITY_DN58920_c0_g1_i22 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37981; FTRINITY_DN58920_c0_g1_i13 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37970; FTRINITY_DN58920_c0_g1_i3 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37977; FTRINITY_DN58920_c0_g1_i9 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37982; FTRINITY_DN58920_c0_g1_i14 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37980; FTRINITY_DN58920_c0_g1_i12 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_38000; FTRINITY_DN58920_c0_g1_i28 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37992; FTRINITY_DN58920_c0_g1_i21 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37979; FTRINITY_DN58920_c0_g1_i11 1293 1313 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37996; FTRINITY_DN58920_c0_g1_i25 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37978; FTRINITY_DN58920_c0_g1_i10 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37995; FTRINITY_DN58920_c0_g1_i24 817 837 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37999; FTRINITY_DN58920_c0_g1_i27 745 765 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37990; FTRINITY_DN58920_c0_g1_i19 1293 1313 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37987; FTRINITY_DN58920_c0_g1_i17 1293 1313 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_37986; FTRINITY_DN58920_c0_g1_i16 1293 1313 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_238612; FTRINITY_DN54423_c0_g1_i3 1668 1688 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238628; FTRINITY_DN54423_c0_g1_i16 1469 1489 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238630; FTRINITY_DN54423_c0_g1_i18 1714 1734 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238629; FTRINITY_DN54423_c0_g1_i17 1668 1688 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238625; FTRINITY_DN54423_c0_g1_i13 1714 1734 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238636; FTRINITY_DN54423_c0_g1_i23 3485 3505 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238627; FTRINITY_DN54423_c0_g1_i15 3485 3505 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238622; FTRINITY_DN54423_c0_g1_i10 3485 3505 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_238624; FTRINITY_DN54423_c0_g1_i12 3485 3505 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_119183; FTRINITY_DN58269_c0_g3_i4 262 282 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_119181; FTRINITY_DN58269_c0_g3_i3 262 282 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_119187; FTRINITY_DN58269_c0_g3_i5 262 282 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_119179; FTRINITY_DN58269_c0_g3_i2 262 282 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_119174; FTRINITY_DN58269_c0_g3_i1 262 282 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_126840; FTRINITY_DN55617_c3_g1_i1 686 706 TGTGCTCCCGGGTCATTTAGT BLAST psRNATarget
Ll_transcript_93514; FTRINITY_DN54803_c1_g1_i19 109 129 TAAGCTCTTGCTTTATCTAGT BLAST psRNATarget
Ll_transcript_93507; FTRINITY_DN54803_c1_g1_i12 109 129 TAAGCTCTTGCTTTATCTAGT BLAST psRNATarget
Ll_transcript_126356; FTRINITY_DN55611_c4_g1_i2 1790 1810 GATGCTTCCGTGTCGTTTAGT BLAST psRNATarget
Ll_transcript_77184; FTRINITY_DN73536_c0_g1_i1 54 74 GAAGTTCCTGTATCATTCAGT BLAST psRNATarget
Ll_transcript_156507; FTRINITY_DN56577_c0_g4_i2 1580 1600 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_156517; FTRINITY_DN56577_c0_g4_i4 1511 1531 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_156515; FTRINITY_DN56577_c0_g4_i3 2256 2276 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_88404; FTRINITY_DN52475_c0_g1_i1 323 343 GCGGCTCCCCCGTCGTCTGGT BLAST psRNATarget
Ll_transcript_32818; FTRINITY_DN58428_c1_g1_i2 6004 6024 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_32824; FTRINITY_DN58428_c1_g1_i8 6519 6539 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_32829; FTRINITY_DN58428_c1_g1_i12 7343 7363 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_32822; FTRINITY_DN58428_c1_g1_i6 7343 7363 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_199366; FTRINITY_DN49973_c0_g1_i1 2977 2997 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget
Ll_transcript_199368; FTRINITY_DN49973_c0_g1_i3 3102 3122 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget
Ll_transcript_199369; FTRINITY_DN49973_c0_g1_i4 3216 3236 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget
Ll_transcript_328562; TRINITY_DN63003_c0_g1_i1 131 151 TTGGATGCTGCGTCATCCAGT BLAST psRNATarget
Ll_transcript_398161; TRINITY_DN51978_c0_g1_i12 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398169; TRINITY_DN51978_c0_g1_i16 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398175; TRINITY_DN51978_c0_g1_i21 845 865 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398150; TRINITY_DN51978_c0_g1_i6 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398145; TRINITY_DN51978_c0_g1_i2 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398148; TRINITY_DN51978_c0_g1_i4 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398167; TRINITY_DN51978_c0_g1_i14 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398163; TRINITY_DN51978_c0_g1_i13 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398157; TRINITY_DN51978_c0_g1_i9 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_398151; TRINITY_DN51978_c0_g1_i7 773 793 ATAGCTGCTGCGTCATTTGGT BLAST psRNATarget
Ll_transcript_528499; TRINITY_DN51033_c0_g1_i10 619 639 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528492; TRINITY_DN51033_c0_g1_i4 619 639 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528497; TRINITY_DN51033_c0_g1_i8 1442 1462 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528507; TRINITY_DN51033_c0_g1_i16 1442 1462 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528487; TRINITY_DN51033_c0_g1_i1 1442 1462 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528503; TRINITY_DN51033_c0_g1_i13 1704 1724 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528506; TRINITY_DN51033_c0_g1_i15 1488 1508 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528494; TRINITY_DN51033_c0_g1_i6 1704 1724 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528504; TRINITY_DN51033_c0_g1_i14 3521 3541 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528493; TRINITY_DN51033_c0_g1_i5 3521 3541 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528508; TRINITY_DN51033_c0_g1_i17 3177 3197 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528496; TRINITY_DN51033_c0_g1_i7 3521 3541 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528509; TRINITY_DN51033_c0_g1_i18 3177 3197 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_528489; TRINITY_DN51033_c0_g1_i2 3521 3541 GGAGCTCCCGCGTGATCCAAT BLAST psRNATarget
Ll_transcript_294603; TRINITY_DN37425_c0_g3_i1 178 198 GTCGTTTTTGCGTCATCCGGT BLAST psRNATarget
Ll_transcript_397346; TRINITY_DN51936_c0_g1_i3 1701 1721 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_397361; TRINITY_DN51936_c0_g1_i17 1383 1403 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_397350; TRINITY_DN51936_c0_g1_i7 1383 1403 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_397351; TRINITY_DN51936_c0_g1_i8 1383 1403 ATAGCTGCTGTTTCATCCAGT BLAST psRNATarget
Ll_transcript_420623; TRINITY_DN48758_c0_g1_i16 563 583 TAAGCTCTTGCTTTATCTAGT BLAST psRNATarget
Ll_transcript_499049; TRINITY_DN50218_c1_g2_i2 776 796 TGTGCTCCCGGGTCATTTAGT BLAST psRNATarget
Ll_transcript_299402; TRINITY_DN51573_c0_g1_i2 1517 1537 GATGCTTCCGTGTCGTTTAGT BLAST psRNATarget
Ll_transcript_290827; TRINITY_DN49159_c0_g1_i5 1211 1231 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290825; TRINITY_DN49159_c0_g1_i3 1504 1524 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290831; TRINITY_DN49159_c0_g1_i9 1351 1371 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290832; TRINITY_DN49159_c0_g1_i10 1637 1657 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290836; TRINITY_DN49159_c0_g1_i14 1752 1772 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290837; TRINITY_DN49159_c0_g1_i15 1941 1961 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_290834; TRINITY_DN49159_c0_g1_i12 2178 2198 AAGGCTTCAGCGTCATTTAGT BLAST psRNATarget
Ll_transcript_498610; TRINITY_DN50295_c0_g10_i1 304 324 GCGGCTCCCCCGTCGTCTGGT BLAST psRNATarget
Ll_transcript_297435; TRINITY_DN51754_c0_g1_i15 6332 6352 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_297426; TRINITY_DN51754_c0_g1_i7 7384 7404 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_297429; TRINITY_DN51754_c0_g1_i10 7384 7404 GAAGCTCCTGCTTCAACCAGT BLAST psRNATarget
Ll_transcript_334093; TRINITY_DN42966_c0_g1_i2 2122 2142 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget
Ll_transcript_334094; TRINITY_DN42966_c0_g1_i3 3130 3150 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget
Ll_transcript_334092; TRINITY_DN42966_c0_g1_i1 3244 3264 AAAGCCCCCGCGTTGTCTAGA BLAST psRNATarget

Expression of miRNA 21


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)