miRNA 44 details

Id Micro44
SequenceAGCTGCTGACTCGTTGGTTCA 
Annotated namesmtr-miR4414a-5p; 
Annotated pre-miRNANone

Targets of miRNA 44

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_228985; FTRINITY_DN52737_c4_g1_i1 1281 1301 GGAGCTAATGAGTCAGTAGTT BLAST psRNATarget
Ll_transcript_228989; FTRINITY_DN52737_c4_g1_i3 2400 2420 GGAGCTAATGAGTCAGTAGTT BLAST psRNATarget
Ll_transcript_182689; FTRINITY_DN53585_c9_g1_i4 207 227 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182692; FTRINITY_DN53585_c9_g1_i7 248 268 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182688; FTRINITY_DN53585_c9_g1_i3 331 351 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182693; FTRINITY_DN53585_c9_g1_i8 412 432 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182687; FTRINITY_DN53585_c9_g1_i2 434 454 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182690; FTRINITY_DN53585_c9_g1_i5 412 432 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182685; FTRINITY_DN53585_c9_g1_i1 434 454 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182698; FTRINITY_DN53585_c9_g1_i11 1875 1895 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_182697; FTRINITY_DN53585_c9_g1_i10 1875 1895 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_36479; FTRINITY_DN70279_c0_g1_i1 137 157 CCAACCAACGGCTCAGCAGCG BLAST psRNATarget
Ll_transcript_51724; FTRINITY_DN58877_c1_g7_i4 55 75 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_51711; FTRINITY_DN58877_c1_g7_i1 94 114 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_51716; FTRINITY_DN58877_c1_g7_i2 207 227 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_51722; FTRINITY_DN58877_c1_g7_i3 207 227 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_235954; FTRINITY_DN43694_c0_g1_i1 702 722 TGGAACACTGAGTTAGCAGCT BLAST psRNATarget
Ll_transcript_128395; FTRINITY_DN53404_c3_g1_i3 106 126 TCAGCCAACGAGTGGGCAGCA BLAST psRNATarget
Ll_transcript_128396; FTRINITY_DN53404_c3_g1_i4 106 126 TCAGCCAACGAGTGGGCAGCA BLAST psRNATarget
Ll_transcript_175029; FTRINITY_DN44525_c0_g1_i1 1302 1322 AGAACCATCGAGTCAGTAATT BLAST psRNATarget
Ll_transcript_115056; FTRINITY_DN59362_c1_g4_i1 126 146 TCAGCCAAGGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_93592; FTRINITY_DN54862_c1_g6_i1 219 239 TTAACTAACGAGCTAGTAGTT BLAST psRNATarget
Ll_transcript_107617; FTRINITY_DN64727_c0_g1_i1 152 172 GAAATCAACGAGATGGTAGCT BLAST psRNATarget
Ll_transcript_271103; FTRINITY_DN47517_c0_g1_i1 1810 1830 TCCACCAGTGAGTCAGCATCT BLAST psRNATarget
Ll_transcript_79111; FTRINITY_DN58161_c2_g10_i1 1028 1048 AAAACCAACGATTCAGCATTT BLAST psRNATarget
Ll_transcript_157871; FTRINITY_DN54798_c1_g3_i1 82 102 AGAAGGAATGAGTTAGCAGTT BLAST psRNATarget
Ll_transcript_13407; FTRINITY_DN59254_c3_g8_i2 312 332 TCATCCAATGGGTCATCAGCT BLAST psRNATarget
Ll_transcript_13401; FTRINITY_DN59254_c3_g8_i1 323 343 TCATCCAATGGGTCATCAGCT BLAST psRNATarget
Ll_transcript_501534; TRINITY_DN47358_c7_g1_i8 1658 1678 GGAGCTAATGAGTCAGTAGTT BLAST psRNATarget
Ll_transcript_501526; TRINITY_DN47358_c7_g1_i3 1832 1852 GGAGCTAATGAGTCAGTAGTT BLAST psRNATarget
Ll_transcript_501524; TRINITY_DN47358_c7_g1_i1 2034 2054 GGAGCTAATGAGTCAGTAGTT BLAST psRNATarget
Ll_transcript_323750; TRINITY_DN45337_c0_g1_i6 239 259 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_323751; TRINITY_DN45337_c0_g1_i7 339 359 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_323745; TRINITY_DN45337_c0_g1_i3 354 374 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_323743; TRINITY_DN45337_c0_g1_i1 339 359 CAAACTAATGACTCAGCAGCT BLAST psRNATarget
Ll_transcript_356093; TRINITY_DN45889_c0_g1_i9 799 819 CCAACCAAAGAGTTAGCAGCC BLAST psRNATarget
Ll_transcript_356085; TRINITY_DN45889_c0_g1_i4 944 964 CCAACCAAAGAGTTAGCAGCC BLAST psRNATarget
Ll_transcript_342866; TRINITY_DN49890_c0_g1_i2 134 154 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_342882; TRINITY_DN49890_c0_g1_i6 136 156 TGAGCCTGCGAGTCAGCGGCA BLAST psRNATarget
Ll_transcript_283534; TRINITY_DN44631_c0_g1_i2 811 831 TGGAACACTGAGTTAGCAGCT BLAST psRNATarget
Ll_transcript_396204; TRINITY_DN4645_c0_g1_i1 1251 1271 AGAACCATCGAGTCAGTAATT BLAST psRNATarget
Ll_transcript_425114; TRINITY_DN65640_c0_g1_i1 109 129 TCCACCAGTGAGTCAGCATCT BLAST psRNATarget
Ll_transcript_534187; TRINITY_DN38616_c0_g1_i1 87 107 CCAACCAGCAAGTCGGCAGCA BLAST psRNATarget
Ll_transcript_494687; TRINITY_DN43642_c0_g2_i1 1026 1046 AAAACCAACGATTCAGCATTT BLAST psRNATarget
Ll_transcript_526799; TRINITY_DN47522_c1_g2_i1 1051 1071 ACAACCATCAAGTCAGCAGCA BLAST psRNATarget
Ll_transcript_426724; TRINITY_DN45556_c0_g4_i1 1210 1230 TCATCCAATGGGTCATCAGCT BLAST psRNATarget

Expression of miRNA 44


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)