miRNA 472 details

Id Micro472
SequenceAGTTCTTTAGATGGGCTGGACGCC 
Annotated namesNone; 
Annotated pre-miRNANone

Targets of miRNA 472

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_10362; FTRINITY_DN56828_c0_g1_i2 138 161 AAGCTCCAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10369; FTRINITY_DN56828_c0_g1_i9 138 161 AAGCTCCAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10368; FTRINITY_DN56828_c0_g1_i8 138 161 AAGCTCCAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_199767; FTRINITY_DN13429_c0_g1_i2 199 222 GGTTGGCAGCCTATTTAAAGAATT BLAST Degradome_Seq
Ll_transcript_43816; FTRINITY_DN54177_c1_g2_i1 123 146 GGTGTTCAGACCATCTATAGAACT BLAST Degradome_Seq
Ll_transcript_10361; FTRINITY_DN56828_c0_g1_i1 139 161 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10364; FTRINITY_DN56828_c0_g1_i4 139 161 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10363; FTRINITY_DN56828_c0_g1_i3 139 161 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10367; FTRINITY_DN56828_c0_g1_i7 139 161 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_10366; FTRINITY_DN56828_c0_g1_i6 139 161 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_125732; FTRINITY_DN55658_c2_g1_i4 510 533 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125746; FTRINITY_DN55658_c2_g1_i18 753 776 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125751; FTRINITY_DN55658_c2_g1_i22 673 696 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125730; FTRINITY_DN55658_c2_g1_i2 720 743 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125740; FTRINITY_DN55658_c2_g1_i12 753 776 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125733; FTRINITY_DN55658_c2_g1_i5 916 939 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125738; FTRINITY_DN55658_c2_g1_i10 883 906 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125734; FTRINITY_DN55658_c2_g1_i6 1562 1585 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125735; FTRINITY_DN55658_c2_g1_i7 1725 1748 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125744; FTRINITY_DN55658_c2_g1_i16 1562 1585 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125745; FTRINITY_DN55658_c2_g1_i17 1562 1585 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_125736; FTRINITY_DN55658_c2_g1_i8 1725 1748 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_116052; FTRINITY_DN69041_c0_g1_i1 170 193 GATGATTGGTCCATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_269355; FTRINITY_DN55832_c0_g11_i1 206 229 GCATTCCAGTCCATCAGAAGAGCT BLAST Degradome_Seq
Ll_transcript_92540; FTRINITY_DN54816_c1_g1_i3 1464 1487 TGATTCCAGCTTCTCTAAAGGACT BLAST Degradome_Seq
Ll_transcript_202627; FTRINITY_DN56426_c2_g1_i1 319 342 AAGCTCAAGCTCATATAAAGAACT BLAST Degradome_Seq
Ll_transcript_191743; FTRINITY_DN55733_c0_g2_i11 180 203 CTTATCTAGCGCATTTAGAGGACT BLAST Degradome_Seq
Ll_transcript_248498; FTRINITY_DN55975_c7_g2_i1 85 108 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_248505; FTRINITY_DN55975_c7_g2_i4 85 108 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_248503; FTRINITY_DN55975_c7_g2_i3 85 108 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_248500; FTRINITY_DN55975_c7_g2_i2 85 108 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_160182; FTRINITY_DN54784_c0_g1_i9 3046 3069 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_160181; FTRINITY_DN54784_c0_g1_i8 3151 3174 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_163137; FTRINITY_DN53283_c5_g1_i6 527 550 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_160185; FTRINITY_DN54784_c0_g1_i12 3235 3258 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_163132; FTRINITY_DN53283_c5_g1_i3 527 550 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_160188; FTRINITY_DN54784_c0_g1_i15 3340 3363 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_160176; FTRINITY_DN54784_c0_g1_i5 3348 3371 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_160173; FTRINITY_DN54784_c0_g1_i2 3453 3476 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_163135; FTRINITY_DN53283_c5_g1_i5 527 550 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_163130; FTRINITY_DN53283_c5_g1_i2 1103 1126 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_145599; FTRINITY_DN59040_c3_g3_i1 126 149 GGCTTCCAGGGCATTTGAAGAATT BLAST Degradome_Seq
Ll_transcript_159877; FTRINITY_DN54755_c4_g1_i5 933 956 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_144109; FTRINITY_DN51921_c0_g1_i2 1087 1110 AATCTCTAGCTTATATAAAGGACT BLAST Degradome_Seq
Ll_transcript_159874; FTRINITY_DN54755_c4_g1_i2 933 956 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_159876; FTRINITY_DN54755_c4_g1_i4 933 956 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_159873; FTRINITY_DN54755_c4_g1_i1 1249 1272 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_183177; FTRINITY_DN42455_c0_g1_i1 179 202 GGTTGTTAGTCAATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_103596; FTRINITY_DN54938_c0_g1_i3 688 711 GCCATCAAGCTGATCTGAAGAACT BLAST Degradome_Seq
Ll_transcript_218792; FTRINITY_DN56300_c0_g2_i4 2185 2208 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_218790; FTRINITY_DN56300_c0_g2_i2 2210 2233 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_218803; FTRINITY_DN56300_c0_g2_i15 2330 2353 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_18820; FTRINITY_DN54543_c1_g1_i5 111 134 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_229936; FTRINITY_DN61883_c0_g1_i1 177 200 ACGTTCCACCTCATCTGAGGAACA BLAST Degradome_Seq
Ll_transcript_18818; FTRINITY_DN54543_c1_g1_i3 111 134 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18817; FTRINITY_DN54543_c1_g1_i2 111 134 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18828; FTRINITY_DN54543_c1_g1_i13 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18822; FTRINITY_DN54543_c1_g1_i7 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18824; FTRINITY_DN54543_c1_g1_i9 111 134 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18819; FTRINITY_DN54543_c1_g1_i4 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18826; FTRINITY_DN54543_c1_g1_i11 111 134 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_18823; FTRINITY_DN54543_c1_g1_i8 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_418374; TRINITY_DN46067_c0_g1_i1 120 143 AAGCTCCAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418376; TRINITY_DN46067_c0_g1_i3 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418380; TRINITY_DN46067_c0_g1_i7 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418381; TRINITY_DN46067_c0_g1_i8 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418377; TRINITY_DN46067_c0_g1_i4 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418379; TRINITY_DN46067_c0_g1_i6 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418375; TRINITY_DN46067_c0_g1_i2 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_418378; TRINITY_DN46067_c0_g1_i5 121 143 GGCTCTAGCTTGTTTGAAGAACT BLAST Degradome_Seq
Ll_transcript_424221; TRINITY_DN47900_c6_g1_i2 507 530 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424231; TRINITY_DN47900_c6_g1_i7 510 533 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424242; TRINITY_DN47900_c6_g1_i14 347 370 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424227; TRINITY_DN47900_c6_g1_i5 511 534 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424245; TRINITY_DN47900_c6_g1_i17 347 370 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424239; TRINITY_DN47900_c6_g1_i12 775 798 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424235; TRINITY_DN47900_c6_g1_i10 510 533 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424220; TRINITY_DN47900_c6_g1_i1 511 534 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424230; TRINITY_DN47900_c6_g1_i6 775 798 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424238; TRINITY_DN47900_c6_g1_i11 693 716 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_424247; TRINITY_DN47900_c6_g1_i18 775 798 TAGCTTTAGCTTATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_388831; TRINITY_DN50992_c1_g10_i1 443 466 GCATTCCAGTCCATCAGAAGAGCT BLAST Degradome_Seq
Ll_transcript_477522; TRINITY_DN74946_c0_g1_i1 611 634 GATGATTGGTCCATCTAAAGAACA BLAST Degradome_Seq
Ll_transcript_277050; TRINITY_DN45729_c4_g2_i2 1237 1260 TGATTCCAGCTTCTCTAAAGGACT BLAST Degradome_Seq
Ll_transcript_338915; TRINITY_DN48573_c3_g1_i1 1008 1031 AAGCTCAAGCTCATATAAAGAACT BLAST Degradome_Seq
Ll_transcript_433926; TRINITY_DN46608_c7_g1_i10 605 628 CTTATCTAGCGCATTTAGAGGACT BLAST Degradome_Seq
Ll_transcript_433930; TRINITY_DN46608_c7_g1_i14 624 647 CTTATCTAGCGCATTTAGAGGACT BLAST Degradome_Seq
Ll_transcript_433943; TRINITY_DN46608_c7_g1_i26 717 740 CTTATCTAGCGCATTTAGAGGACT BLAST Degradome_Seq
Ll_transcript_388075; TRINITY_DN50988_c0_g1_i4 280 303 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_502355; TRINITY_DN47399_c0_g2_i2 529 552 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_502356; TRINITY_DN47399_c0_g2_i3 634 657 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_502348; TRINITY_DN47399_c0_g2_i1 776 799 TCTCAGTGGCTCATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_388073; TRINITY_DN50988_c0_g1_i2 252 275 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_388079; TRINITY_DN50988_c0_g1_i7 252 275 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_388076; TRINITY_DN50988_c0_g1_i5 508 531 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_388078; TRINITY_DN50988_c0_g1_i6 508 531 CGATGGTGGCCCATCTAGAGAATT BLAST Degradome_Seq
Ll_transcript_300912; TRINITY_DN51537_c1_g1_i7 517 540 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_300911; TRINITY_DN51537_c1_g1_i6 517 540 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_300902; TRINITY_DN51537_c1_g1_i1 517 540 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_300902; TRINITY_DN51537_c1_g1_i1 552 575 ATTTATTGGCCCATCTAAGGAACA BLAST Degradome_Seq
Ll_transcript_337283; TRINITY_DN48560_c3_g1_i3 157 180 GAGGTCGAGCCCATCTGGACAACT BLAST Degradome_Seq
Ll_transcript_530900; TRINITY_DN54233_c0_g1_i1 335 358 AAATTCTAGCCTATATAGAGAATT BLAST Degradome_Seq
Ll_transcript_323718; TRINITY_DN45374_c0_g7_i1 650 673 CTTTTTTAGCTTTTCTAAAGAACT BLAST Degradome_Seq
Ll_transcript_494900; TRINITY_DN43688_c1_g1_i1 1149 1172 AATCTCTAGCTTATATAAAGGACT BLAST Degradome_Seq
Ll_transcript_374585; TRINITY_DN47715_c1_g2_i1 918 941 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_374590; TRINITY_DN47715_c1_g2_i6 1291 1314 TCTTTTTAGCTTATCTAAAAAACT BLAST Degradome_Seq
Ll_transcript_378025; TRINITY_DN50722_c1_g1_i12 499 522 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_402802; TRINITY_DN50559_c3_g8_i1 408 431 GCCATCAAGCTGATCTGAAGAACT BLAST Degradome_Seq
Ll_transcript_317565; TRINITY_DN9822_c0_g1_i1 246 269 GGTTGTTAGTCAATCTAAAGAATT BLAST Degradome_Seq
Ll_transcript_378028; TRINITY_DN50722_c1_g1_i15 985 1008 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_378022; TRINITY_DN50722_c1_g1_i9 1061 1084 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_378021; TRINITY_DN50722_c1_g1_i8 2219 2242 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_378026; TRINITY_DN50722_c1_g1_i13 2339 2362 GATGACCAGTCTGACTGAAGAACT BLAST Degradome_Seq
Ll_transcript_333809; TRINITY_DN42977_c0_g1_i2 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq
Ll_transcript_333812; TRINITY_DN42977_c0_g1_i5 175 198 CACGCCCATTCCATCAAAGGAACT BLAST Degradome_Seq

Expression of miRNA 472


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)