miRNA 486 details

Id Micro486
SequenceTTCGTTTGTGTGCAGACTCTGT 
Annotated namesNone; 
Annotated pre-miRNANone

Targets of miRNA 486

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_256731; FTRINITY_DN59142_c2_g1_i5 903 924 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256739; FTRINITY_DN59142_c2_g1_i10 903 924 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256729; FTRINITY_DN59142_c2_g1_i4 1115 1136 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256734; FTRINITY_DN59142_c2_g1_i6 1115 1136 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256726; FTRINITY_DN59142_c2_g1_i1 1115 1136 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256736; FTRINITY_DN59142_c2_g1_i7 1115 1136 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256727; FTRINITY_DN59142_c2_g1_i2 1115 1136 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_256738; FTRINITY_DN59142_c2_g1_i9 903 924 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_256737; FTRINITY_DN59142_c2_g1_i8 903 924 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_256745; FTRINITY_DN59142_c2_g1_i15 903 924 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_256744; FTRINITY_DN59142_c2_g1_i14 903 924 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_256747; FTRINITY_DN59142_c2_g1_i17 903 924 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_34439; FTRINITY_DN58740_c3_g3_i10 674 695 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_34427; FTRINITY_DN58740_c3_g3_i5 922 943 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_177610; FTRINITY_DN58675_c1_g1_i5 124 145 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_212146; FTRINITY_DN58363_c2_g3_i1 378 399 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_177614; FTRINITY_DN58675_c1_g1_i7 124 145 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_177627; FTRINITY_DN58675_c1_g1_i15 516 537 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_219276; FTRINITY_DN56308_c4_g1_i6 657 678 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219272; FTRINITY_DN56308_c4_g1_i3 971 992 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219271; FTRINITY_DN56308_c4_g1_i2 1000 1021 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219278; FTRINITY_DN56308_c4_g1_i8 1089 1110 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219273; FTRINITY_DN56308_c4_g1_i4 2293 2314 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219280; FTRINITY_DN56308_c4_g1_i10 2322 2343 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_219270; FTRINITY_DN56308_c4_g1_i1 2411 2432 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_167979; FTRINITY_DN57355_c0_g1_i14 1566 1587 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_167963; FTRINITY_DN57355_c0_g1_i2 2191 2212 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_14084; FTRINITY_DN59235_c0_g3_i2 591 612 GGTTGGTTTGCACATAAATGAA BLAST Degradome_Seq
Ll_transcript_167973; FTRINITY_DN57355_c0_g1_i11 2886 2907 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_52360; FTRINITY_DN58849_c3_g1_i18 51 72 AACGAGTCTGCTTGCAGACGAA BLAST Degradome_Seq
Ll_transcript_52345; FTRINITY_DN58849_c3_g1_i4 51 72 AACGAGTCTGCTTGCAGACGAA BLAST Degradome_Seq
Ll_transcript_52349; FTRINITY_DN58849_c3_g1_i8 202 223 AACGAGTCTGCTTGCAGACGAA BLAST Degradome_Seq
Ll_transcript_53425; FTRINITY_DN57207_c6_g1_i7 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53426; FTRINITY_DN57207_c6_g1_i8 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53414; FTRINITY_DN57207_c6_g1_i1 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53429; FTRINITY_DN57207_c6_g1_i10 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53430; FTRINITY_DN57207_c6_g1_i11 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53419; FTRINITY_DN57207_c6_g1_i4 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_53424; FTRINITY_DN57207_c6_g1_i6 503 524 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_113579; FTRINITY_DN59375_c2_g3_i3 783 804 ACAGAGTCTGCACATGGAGGGA BLAST Degradome_Seq
Ll_transcript_113580; FTRINITY_DN59375_c2_g3_i4 783 804 ACAGAGTCTGCACATGGAGGGA BLAST Degradome_Seq
Ll_transcript_28149; FTRINITY_DN48284_c0_g1_i4 649 670 ATAGGGTTTGTGTATAAATGAA BLAST Degradome_Seq
Ll_transcript_44308; FTRINITY_DN54110_c1_g4_i1 1576 1597 ATAGAGTCTGTGTGTAGATGAA BLAST Degradome_Seq
Ll_transcript_217317; FTRINITY_DN66197_c0_g1_i1 1046 1067 ATAGATTTTGCCCACAAATGAA BLAST Degradome_Seq
Ll_transcript_238170; FTRINITY_DN54446_c2_g1_i2 1054 1075 CCAGAATCTACGCACAAACGGA BLAST Degradome_Seq
Ll_transcript_224829; FTRINITY_DN56122_c1_g1_i7 2529 2550 CTAGAGTCTGCATGAGAATGAA BLAST Degradome_Seq
Ll_transcript_28503; FTRINITY_DN52215_c0_g4_i5 3088 3109 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_28499; FTRINITY_DN52215_c0_g4_i3 3177 3198 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_28497; FTRINITY_DN52215_c0_g4_i2 3245 3266 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_28495; FTRINITY_DN52215_c0_g4_i1 3380 3401 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_99044; FTRINITY_DN57181_c0_g4_i1 81 102 ATGGAGTCAGTACACCAACGGA BLAST Degradome_Seq
Ll_transcript_250087; FTRINITY_DN55925_c2_g1_i1 3896 3917 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_250093; FTRINITY_DN55925_c2_g1_i5 4589 4610 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_89054; FTRINITY_DN53985_c4_g5_i1 92 113 ATAGATGGTGCACACAAATGAA BLAST Degradome_Seq
Ll_transcript_235502; FTRINITY_DN52850_c5_g1_i3 1000 1021 GGAGAGTATGTATATAAATGAG BLAST Degradome_Seq
Ll_transcript_235494; FTRINITY_DN52850_c5_g1_i1 1373 1394 GGAGAGTATGTATATAAATGAG BLAST Degradome_Seq
Ll_transcript_479065; TRINITY_DN52710_c1_g2_i1 1131 1152 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_479068; TRINITY_DN52710_c1_g2_i4 919 940 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_479084; TRINITY_DN52710_c1_g2_i14 1020 1041 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_479081; TRINITY_DN52710_c1_g2_i12 1131 1152 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_479083; TRINITY_DN52710_c1_g2_i13 1491 1512 GCAGAGTCTGCACACAAACGAA BLAST Degradome_Seq
Ll_transcript_479071; TRINITY_DN52710_c1_g2_i6 1009 1030 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_479067; TRINITY_DN52710_c1_g2_i3 1009 1030 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_479085; TRINITY_DN52710_c1_g2_i15 1305 1326 GCAGAGTCTGCACACAAGCGAA BLAST Degradome_Seq
Ll_transcript_461475; TRINITY_DN51130_c0_g6_i3 392 413 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_461491; TRINITY_DN51130_c0_g6_i8 392 413 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_461471; TRINITY_DN51130_c0_g6_i2 392 413 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_461486; TRINITY_DN51130_c0_g6_i6 693 714 ATCGAGTCTATACATAAACGAA BLAST Degradome_Seq
Ll_transcript_504836; TRINITY_DN52531_c1_g1_i19 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504830; TRINITY_DN52531_c1_g1_i14 344 365 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504815; TRINITY_DN52531_c1_g1_i1 344 365 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504826; TRINITY_DN52531_c1_g1_i10 358 379 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504827; TRINITY_DN52531_c1_g1_i11 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504828; TRINITY_DN52531_c1_g1_i12 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504819; TRINITY_DN52531_c1_g1_i4 358 379 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504820; TRINITY_DN52531_c1_g1_i5 344 365 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504834; TRINITY_DN52531_c1_g1_i18 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504825; TRINITY_DN52531_c1_g1_i9 358 379 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504832; TRINITY_DN52531_c1_g1_i16 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504816; TRINITY_DN52531_c1_g1_i2 344 365 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504818; TRINITY_DN52531_c1_g1_i3 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504831; TRINITY_DN52531_c1_g1_i15 344 365 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_504829; TRINITY_DN52531_c1_g1_i13 418 439 GCTGAGGCTGCACACAAATGGG BLAST Degradome_Seq
Ll_transcript_386378; TRINITY_DN50940_c1_g6_i8 1255 1276 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_386361; TRINITY_DN50940_c1_g6_i3 2294 2315 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_386366; TRINITY_DN50940_c1_g6_i4 2412 2433 TCAGGGTCTGCGCGCAAACAAA BLAST Degradome_Seq
Ll_transcript_424856; TRINITY_DN53262_c0_g1_i1 29 50 AGAGAGGCTGCATGCAGACGAG BLAST Degradome_Seq
Ll_transcript_285890; TRINITY_DN48824_c2_g2_i1 646 667 GGTTGGTTTGCACATAAATGAA BLAST Degradome_Seq
Ll_transcript_398773; TRINITY_DN51944_c1_g2_i11 2631 2652 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_398779; TRINITY_DN51944_c1_g2_i15 2694 2715 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_398771; TRINITY_DN51944_c1_g2_i10 2740 2761 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_398775; TRINITY_DN51944_c1_g2_i13 3623 3644 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_398765; TRINITY_DN51944_c1_g2_i6 3626 3647 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_398787; TRINITY_DN51944_c1_g2_i22 4755 4776 GTTAAGTTTGTATACAAGCGAA BLAST Degradome_Seq
Ll_transcript_385343; TRINITY_DN47255_c1_g1_i4 510 531 TGAGAATGTGCATACAAATGAA BLAST Degradome_Seq
Ll_transcript_457850; TRINITY_DN49911_c3_g1_i1 696 717 ACAGAGTCTGCACATGGAGGGA BLAST Degradome_Seq
Ll_transcript_457853; TRINITY_DN49911_c3_g1_i2 696 717 ACAGAGTCTGCACATGGAGGGA BLAST Degradome_Seq
Ll_transcript_287550; TRINITY_DN51301_c0_g3_i3 342 363 ATAGGGTTTGTGTATAAATGAA BLAST Degradome_Seq
Ll_transcript_456992; TRINITY_DN49942_c3_g1_i2 2373 2394 ATAGAGTCTGTGTGTAGATGAA BLAST Degradome_Seq
Ll_transcript_456994; TRINITY_DN49942_c3_g1_i3 2408 2429 ATAGAGTCTGTGTGTAGATGAA BLAST Degradome_Seq
Ll_transcript_482033; TRINITY_DN72664_c0_g1_i1 1046 1067 ATAGATTTTGCCCACAAATGAA BLAST Degradome_Seq
Ll_transcript_517563; TRINITY_DN51297_c5_g2_i1 1045 1066 CCAGAATCTACGCACAAACGGA BLAST Degradome_Seq
Ll_transcript_517565; TRINITY_DN51297_c5_g2_i3 1472 1493 CCAGAATCTACGCACAAACGGA BLAST Degradome_Seq
Ll_transcript_418586; TRINITY_DN46046_c0_g2_i7 1897 1918 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_418580; TRINITY_DN46046_c0_g2_i3 2980 3001 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_418585; TRINITY_DN46046_c0_g2_i6 3115 3136 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_418579; TRINITY_DN46046_c0_g2_i2 3204 3225 TCAGAGTCAGCATACAAACCAG BLAST Degradome_Seq
Ll_transcript_362393; TRINITY_DN48473_c1_g1_i2 2153 2174 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_362397; TRINITY_DN48473_c1_g1_i5 2682 2703 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_362400; TRINITY_DN48473_c1_g1_i8 2697 2718 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_362399; TRINITY_DN48473_c1_g1_i7 3524 3545 CAAGAGTCTGCATACATGTGGA BLAST Degradome_Seq
Ll_transcript_390082; TRINITY_DN46496_c1_g1_i8 226 247 GAAGAGACTTTACACAAGCGAA BLAST Degradome_Seq

Expression of miRNA 486


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)