miRNA 488 details

Id Micro488
SequenceAAGGGTTGTTTACAGAGTTTA 
Annotated namesNone; 
Annotated pre-miRNAmes-MIR394b

Targets of miRNA 488

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_256149; FTRINITY_DN59138_c1_g1_i15 1855 1875 CGAATTTTGTAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_256133; FTRINITY_DN59138_c1_g1_i4 2068 2088 CGAATTTTGTAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_144636; FTRINITY_DN78078_c0_g1_i1 348 368 CAAATCCTGTAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_187775; FTRINITY_DN56742_c2_g4_i1 3307 3327 GCAACTCTGTGAACAATCCTA BLAST Degradome_Seq
Ll_transcript_79109; FTRINITY_DN58161_c2_g9_i1 600 620 AAAGCTCTTTGAACAACCCTT BLAST Degradome_Seq
Ll_transcript_240984; FTRINITY_DN53052_c0_g3_i3 1609 1629 CAAATTCTGAAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_63557; FTRINITY_DN55368_c0_g2_i4 3988 4008 CAAATTCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_63549; FTRINITY_DN55368_c0_g2_i2 4027 4047 CAAATTCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_63556; FTRINITY_DN55368_c0_g2_i3 4091 4111 CAAATTCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_203945; FTRINITY_DN56985_c3_g1_i1 75 95 TAAATTTTGTGAATAATTCTT BLAST Degradome_Seq
Ll_transcript_10261; FTRINITY_DN56843_c0_g3_i1 573 593 TAAGCTCTGTGAGTAACTTTT BLAST Degradome_Seq
Ll_transcript_88093; FTRINITY_DN52419_c8_g3_i1 1347 1367 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_230475; FTRINITY_DN49380_c0_g1_i1 1542 1562 TAAGTTTTGTAAATGACTCTT BLAST Degradome_Seq
Ll_transcript_230477; FTRINITY_DN49380_c0_g1_i3 1670 1690 TAAGTTTTGTAAATGACTCTT BLAST Degradome_Seq
Ll_transcript_88100; FTRINITY_DN52419_c8_g3_i3 1347 1367 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190790; FTRINITY_DN56745_c2_g1_i24 1891 1911 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190766; FTRINITY_DN56745_c2_g1_i2 1967 1987 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190776; FTRINITY_DN56745_c2_g1_i11 2097 2117 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190772; FTRINITY_DN56745_c2_g1_i8 2173 2193 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190786; FTRINITY_DN56745_c2_g1_i20 2175 2195 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190788; FTRINITY_DN56745_c2_g1_i22 2330 2350 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190767; FTRINITY_DN56745_c2_g1_i3 2406 2426 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190768; FTRINITY_DN56745_c2_g1_i4 2586 2606 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190781; FTRINITY_DN56745_c2_g1_i15 2612 2632 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190783; FTRINITY_DN56745_c2_g1_i17 2662 2682 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_190782; FTRINITY_DN56745_c2_g1_i16 2792 2812 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_73396; FTRINITY_DN56038_c2_g1_i11 941 961 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_73393; FTRINITY_DN56038_c2_g1_i8 1015 1035 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_73402; FTRINITY_DN56038_c2_g1_i17 1093 1113 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_73401; FTRINITY_DN56038_c2_g1_i16 1167 1187 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_73383; FTRINITY_DN56038_c2_g1_i1 1093 1113 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_73387; FTRINITY_DN56038_c2_g1_i4 1167 1187 TACACTTTGTAGACAACCCTC BLAST Degradome_Seq
Ll_transcript_156320; FTRINITY_DN56595_c0_g6_i2 879 899 TAGAATTTGTAAATAACCTTT BLAST Degradome_Seq
Ll_transcript_94361; FTRINITY_DN54866_c3_g2_i3 621 641 TAAAATCTGTAAATAATTTTT BLAST Degradome_Seq
Ll_transcript_156329; FTRINITY_DN56595_c0_g6_i7 1692 1712 TAGAATTTGTAAATAACCTTT BLAST Degradome_Seq
Ll_transcript_187775; FTRINITY_DN56742_c2_g4_i1 311 331 GAAATTCTGGAAACAATTCTT BLAST Degradome_Seq
Ll_transcript_35901; FTRINITY_DN58716_c0_g3_i1 1993 2013 AAAACTCTATGGACAACTCTT BLAST Degradome_Seq
Ll_transcript_35932; FTRINITY_DN58716_c0_g3_i7 2300 2320 AAAACTCTATGGACAACTCTT BLAST Degradome_Seq
Ll_transcript_187784; FTRINITY_DN56742_c2_g4_i2 311 331 GAAATTCTGGAAACAATTCTT BLAST Degradome_Seq
Ll_transcript_117236; FTRINITY_DN64584_c0_g1_i1 55 75 TAGAATATGTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_143176; FTRINITY_DN54032_c1_g1_i4 715 735 CAAATCCTGTAAACAACCTTG BLAST Degradome_Seq
Ll_transcript_208021; FTRINITY_DN52622_c1_g4_i1 215 235 CAAATTCCGTAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_174436; FTRINITY_DN52140_c4_g1_i4 292 312 GAAACTGTGTAAACAGCACTT BLAST Degradome_Seq
Ll_transcript_201636; FTRINITY_DN56435_c0_g2_i7 540 560 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_174433; FTRINITY_DN52140_c4_g1_i1 384 404 GAAACTGTGTAAACAGCACTT BLAST Degradome_Seq
Ll_transcript_201623; FTRINITY_DN56435_c0_g2_i3 721 741 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_163482; FTRINITY_DN53220_c0_g1_i8 486 506 GGAGTTCTCTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_201627; FTRINITY_DN56435_c0_g2_i4 819 839 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_163475; FTRINITY_DN53220_c0_g1_i1 548 568 GGAGTTCTCTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_201639; FTRINITY_DN56435_c0_g2_i8 819 839 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_154259; FTRINITY_DN56524_c0_g5_i5 8 28 CAAATCCTGGAAACAACCCTT BLAST Degradome_Seq
Ll_transcript_162236; FTRINITY_DN53244_c1_g7_i3 901 921 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_201622; FTRINITY_DN56435_c0_g2_i2 1134 1154 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_162232; FTRINITY_DN53244_c1_g7_i2 1201 1221 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_5138; FTRINITY_DN58509_c0_g2_i7 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5126; FTRINITY_DN58509_c0_g2_i1 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5130; FTRINITY_DN58509_c0_g2_i4 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5129; FTRINITY_DN58509_c0_g2_i3 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5135; FTRINITY_DN58509_c0_g2_i6 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5132; FTRINITY_DN58509_c0_g2_i5 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5127; FTRINITY_DN58509_c0_g2_i2 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_5149; FTRINITY_DN58509_c0_g2_i11 180 200 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_248053; FTRINITY_DN55933_c2_g4_i1 115 135 ACAATTTTGTAAACAATTCTG BLAST Degradome_Seq
Ll_transcript_218239; FTRINITY_DN56302_c2_g1_i18 749 769 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_218233; FTRINITY_DN56302_c2_g1_i12 760 780 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_218223; FTRINITY_DN56302_c2_g1_i2 802 822 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_218238; FTRINITY_DN56302_c2_g1_i17 844 864 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_262699; FTRINITY_DN53696_c0_g1_i1 156 176 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_254; FTRINITY_DN54656_c4_g1_i3 401 421 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_93709; FTRINITY_DN54844_c0_g5_i4 484 504 TAAGCTTTGTCAACAATTCTT BLAST Degradome_Seq
Ll_transcript_93703; FTRINITY_DN54844_c0_g5_i1 484 504 TAAGCTTTGTCAACAATTCTT BLAST Degradome_Seq
Ll_transcript_93704; FTRINITY_DN54844_c0_g5_i2 500 520 TAAGCTTTGTTAACAATTCTT BLAST Degradome_Seq
Ll_transcript_93711; FTRINITY_DN54844_c0_g5_i5 500 520 TAAGCTTTGTTAACAATTCTT BLAST Degradome_Seq
Ll_transcript_93706; FTRINITY_DN54844_c0_g5_i3 500 520 TAAGCTTTGTTAACAATTCTT BLAST Degradome_Seq
Ll_transcript_168378; FTRINITY_DN57336_c1_g2_i7 1625 1645 TAAATTCTGTAAATAATGTTT BLAST Degradome_Seq
Ll_transcript_223844; FTRINITY_DN53176_c0_g1_i1 15478 15498 TAGATTCTGTAAACAATTCAT BLAST Degradome_Seq
Ll_transcript_223845; FTRINITY_DN53176_c0_g1_i2 15505 15525 TAGATTCTGTAAACAATTCAT BLAST Degradome_Seq
Ll_transcript_96036; FTRINITY_DN45801_c0_g1_i1 180 200 TAAAATCTGTTAACAACCCTG BLAST Degradome_Seq
Ll_transcript_69219; FTRINITY_DN55064_c1_g1_i7 721 741 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_69223; FTRINITY_DN55064_c1_g1_i11 1514 1534 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_69213; FTRINITY_DN55064_c1_g1_i2 1603 1623 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_69218; FTRINITY_DN55064_c1_g1_i6 1603 1623 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_48642; FTRINITY_DN31011_c0_g1_i1 81 101 TAAATCCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_117386; FTRINITY_DN25532_c0_g1_i1 146 166 TAAATCCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_113503; FTRINITY_DN59382_c0_g3_i1 144 164 TGAACTTTGTAATCAAACCTT BLAST Degradome_Seq
Ll_transcript_156331; FTRINITY_DN56595_c0_g4_i9 953 973 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_156341; FTRINITY_DN56595_c0_g4_i14 1565 1585 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_156328; FTRINITY_DN56595_c0_g4_i8 1636 1656 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_208345; FTRINITY_DN52658_c2_g3_i1 82 102 TGAATTTTGTAAACAATCTCT BLAST Degradome_Seq
Ll_transcript_11087; FTRINITY_DN56855_c4_g1_i3 3334 3354 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11092; FTRINITY_DN56855_c4_g1_i8 3496 3516 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11088; FTRINITY_DN56855_c4_g1_i4 3779 3799 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11089; FTRINITY_DN56855_c4_g1_i5 3798 3818 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11090; FTRINITY_DN56855_c4_g1_i6 3941 3961 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11091; FTRINITY_DN56855_c4_g1_i7 3960 3980 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11086; FTRINITY_DN56855_c4_g1_i2 4243 4263 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_11085; FTRINITY_DN56855_c4_g1_i1 4405 4425 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_243494; FTRINITY_DN19664_c0_g1_i1 153 173 CAAATTCTGCAAGCAGCTCTT BLAST Degradome_Seq
Ll_transcript_108189; FTRINITY_DN68976_c0_g1_i1 182 202 AAAACTTTGAAGACAATTCTT BLAST Degradome_Seq
Ll_transcript_134084; FTRINITY_DN3429_c0_g1_i1 328 348 GAAATTTTGGAAACAATTCTT BLAST Degradome_Seq
Ll_transcript_27786; FTRINITY_DN22204_c0_g1_i1 375 395 GAAGCTCTTTAAATAGCCTTT BLAST Degradome_Seq
Ll_transcript_262430; FTRINITY_DN53643_c1_g5_i2 506 526 CAAATTCTGGAAATAACTTTT BLAST Degradome_Seq
Ll_transcript_75209; FTRINITY_DN55589_c12_g1_i1 85 105 CAAATTCTGAAAATAGCCTTT BLAST Degradome_Seq
Ll_transcript_9823; FTRINITY_DN56891_c2_g2_i2 499 519 CAAATTTTGTAATCAACTTTT BLAST Degradome_Seq
Ll_transcript_117681; FTRINITY_DN74800_c0_g1_i1 676 696 AAAACTTTCTAGATAATCCTT BLAST Degradome_Seq
Ll_transcript_122026; FTRINITY_DN53773_c1_g1_i1 235 255 CAAATTCTGTAAATAACTTCT BLAST Degradome_Seq
Ll_transcript_178221; FTRINITY_DN58610_c0_g8_i2 354 374 AAGACTTTGTAGGAAACCCTT BLAST Degradome_Seq
Ll_transcript_262413; FTRINITY_DN53643_c1_g5_i1 506 526 CAAATTCTGGAAATAACTTTT BLAST Degradome_Seq
Ll_transcript_125762; FTRINITY_DN55658_c3_g3_i2 1506 1526 CAAACTTTGTAAATAACTTAT BLAST Degradome_Seq
Ll_transcript_36920; FTRINITY_DN58949_c1_g1_i4 3359 3379 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36918; FTRINITY_DN58949_c1_g1_i3 3557 3577 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36915; FTRINITY_DN58949_c1_g1_i1 3648 3668 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36923; FTRINITY_DN58949_c1_g1_i6 3779 3799 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36931; FTRINITY_DN58949_c1_g1_i9 3870 3890 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36934; FTRINITY_DN58949_c1_g1_i10 4068 4088 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_36937; FTRINITY_DN58949_c1_g1_i11 4159 4179 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_92415; FTRINITY_DN54871_c8_g1_i3 5917 5937 CAAATTCTGAAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_92414; FTRINITY_DN54871_c8_g1_i2 6002 6022 CAAATTCTGAAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_92418; FTRINITY_DN54871_c8_g1_i6 6061 6081 CAAATTCTGAAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_92417; FTRINITY_DN54871_c8_g1_i5 7102 7122 CAAATTCTGAAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_464564; TRINITY_DN52656_c1_g1_i13 2231 2251 CGAATTTTGTAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_442874; TRINITY_DN47843_c2_g2_i1 554 574 CAAATCCTGTAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_348322; TRINITY_DN52468_c9_g2_i9 150 170 TAAATTTTGTAAATAACCCTC BLAST Degradome_Seq
Ll_transcript_472756; TRINITY_DN52073_c0_g1_i1 20 40 TAAATTTTGTAAATAACCCTC BLAST Degradome_Seq
Ll_transcript_310506; TRINITY_DN47106_c0_g1_i3 1933 1953 TAAATCCTGTAAACGACTCTT BLAST Degradome_Seq
Ll_transcript_310504; TRINITY_DN47106_c0_g1_i1 2010 2030 TAAATCCTGTAAACGACTCTT BLAST Degradome_Seq
Ll_transcript_361026; TRINITY_DN47661_c2_g1_i1 671 691 AAAGCTCTTTGAACAACCCTT BLAST Degradome_Seq
Ll_transcript_415606; TRINITY_DN49698_c6_g1_i2 1598 1618 CAAATTCTGAAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_415615; TRINITY_DN49698_c6_g1_i7 1614 1634 CAAATTCTGAAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_308740; TRINITY_DN47146_c2_g5_i1 177 197 AAAACGCTGTAAGCAACCCTC BLAST Degradome_Seq
Ll_transcript_338697; TRINITY_DN48520_c10_g1_i1 275 295 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_293255; TRINITY_DN49142_c0_g1_i1 66 86 TAAATTTTGTGAATAATTCTT BLAST Degradome_Seq
Ll_transcript_447928; TRINITY_DN51879_c2_g1_i4 54 74 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_447953; TRINITY_DN51879_c2_g1_i9 54 74 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_338699; TRINITY_DN48520_c10_g2_i2 1351 1371 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_447918; TRINITY_DN51879_c2_g1_i1 54 74 TAAATTCTGAAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_363546; TRINITY_DN48474_c3_g1_i11 1080 1100 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_527829; TRINITY_DN43302_c0_g1_i4 1462 1482 TAAGTTTTGTAAATGACTCTT BLAST Degradome_Seq
Ll_transcript_527828; TRINITY_DN43302_c0_g1_i3 1581 1601 TAAGTTTTGTAAATGACTCTT BLAST Degradome_Seq
Ll_transcript_527826; TRINITY_DN43302_c0_g1_i1 1709 1729 TAAGTTTTGTAAATGACTCTT BLAST Degradome_Seq
Ll_transcript_363535; TRINITY_DN48474_c3_g1_i2 1804 1824 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_363548; TRINITY_DN48474_c3_g1_i13 1916 1936 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_363534; TRINITY_DN48474_c3_g1_i1 1988 2008 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_363537; TRINITY_DN48474_c3_g1_i4 2060 2080 TAAATTCTGGAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_437935; TRINITY_DN48918_c0_g1_i1 1070 1090 TAAGCTCTGTGAGTAACTTTT BLAST Degradome_Seq
Ll_transcript_437937; TRINITY_DN48918_c0_g1_i3 1070 1090 TAAGCTCTGTGAGTAACTTTT BLAST Degradome_Seq
Ll_transcript_329237; TRINITY_DN39122_c0_g1_i1 449 469 TAAAATCTGTAAATAATTTTT BLAST Degradome_Seq
Ll_transcript_385167; TRINITY_DN47286_c0_g4_i1 75 95 AAAACTCTATGAACAATCTTT BLAST Degradome_Seq
Ll_transcript_385168; TRINITY_DN47286_c0_g4_i2 75 95 AAAACTCTATGAACAATCTTT BLAST Degradome_Seq
Ll_transcript_300630; TRINITY_DN51541_c1_g1_i1 2296 2316 AAAACTCTATGGACAACTCTT BLAST Degradome_Seq
Ll_transcript_327510; TRINITY_DN48049_c0_g4_i2 453 473 CAAATCCTGTAAACAACCTTG BLAST Degradome_Seq
Ll_transcript_327518; TRINITY_DN48049_c0_g4_i4 524 544 CAAATCCTGTAAACAACCTTG BLAST Degradome_Seq
Ll_transcript_438345; TRINITY_DN48320_c4_g4_i1 138 158 CAAATTCCGTAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_381011; TRINITY_DN51441_c0_g1_i11 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_482699; TRINITY_DN49364_c3_g4_i2 412 432 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_390046; TRINITY_DN46450_c0_g1_i6 199 219 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_390042; TRINITY_DN46450_c0_g1_i3 199 219 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_390045; TRINITY_DN46450_c0_g1_i5 199 219 CAAATCTTGTAAACAATCTTT BLAST Degradome_Seq
Ll_transcript_482726; TRINITY_DN49364_c3_g4_i4 412 432 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_482733; TRINITY_DN49364_c3_g4_i5 939 959 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_482696; TRINITY_DN49364_c3_g4_i1 939 959 GGAATTCTGTAAGTGACTTTT BLAST Degradome_Seq
Ll_transcript_276753; TRINITY_DN45725_c0_g1_i3 473 493 GGAGTTCTCTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_381004; TRINITY_DN51441_c0_g1_i9 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_380989; TRINITY_DN51441_c0_g1_i2 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_381016; TRINITY_DN51441_c0_g1_i16 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_381003; TRINITY_DN51441_c0_g1_i8 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_276754; TRINITY_DN45725_c0_g1_i4 473 493 GGAGTTCTCTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_505502; TRINITY_DN52590_c2_g4_i7 2491 2511 GAAACTGTGTAAACAGCACTT BLAST Degradome_Seq
Ll_transcript_276756; TRINITY_DN45725_c0_g1_i6 535 555 GGAGTTCTCTAAGCAACCCTT BLAST Degradome_Seq
Ll_transcript_380990; TRINITY_DN51441_c0_g1_i3 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_380999; TRINITY_DN51441_c0_g1_i6 152 172 AGAACTTTGAAAACAACTTTT BLAST Degradome_Seq
Ll_transcript_282514; TRINITY_DN46162_c1_g1_i8 459 479 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_282509; TRINITY_DN46162_c1_g1_i4 779 799 TAGACTCTGTAACCAACTCTA BLAST Degradome_Seq
Ll_transcript_365635; TRINITY_DN46338_c6_g2_i3 140 160 TAAATTCTGTAAACAGTCTGT BLAST Degradome_Seq
Ll_transcript_394152; TRINITY_DN53745_c0_g1_i1 369 389 TAAGCTTTGTCAACAATTCTT BLAST Degradome_Seq
Ll_transcript_449654; TRINITY_DN50667_c0_g1_i10 774 794 TAAATTCTGTAAATAATGTTT BLAST Degradome_Seq
Ll_transcript_334083; TRINITY_DN42915_c0_g1_i6 1025 1045 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_334086; TRINITY_DN42915_c0_g1_i9 1515 1535 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_334084; TRINITY_DN42915_c0_g1_i7 1749 1769 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_334079; TRINITY_DN42915_c0_g1_i2 1789 1809 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_334081; TRINITY_DN42915_c0_g1_i4 2023 2043 TAAATTCTGGAAACAGTCTTT BLAST Degradome_Seq
Ll_transcript_447932; TRINITY_DN51879_c2_g3_i6 5262 5282 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447923; TRINITY_DN51879_c2_g3_i2 5338 5358 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447941; TRINITY_DN51879_c2_g3_i9 5383 5403 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_298072; TRINITY_DN51574_c0_g4_i1 4346 4366 TAGATTCTGTAAACAATTCAT BLAST Degradome_Seq
Ll_transcript_447936; TRINITY_DN51879_c2_g3_i8 5871 5891 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447948; TRINITY_DN51879_c2_g3_i12 6038 6058 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447922; TRINITY_DN51879_c2_g3_i1 6114 6134 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447930; TRINITY_DN51879_c2_g3_i4 6526 6546 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_447964; TRINITY_DN51879_c2_g3_i17 6602 6622 TAAATTCTGAAAACAATTTTT BLAST Degradome_Seq
Ll_transcript_455596; TRINITY_DN49733_c1_g1_i9 2665 2685 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_455588; TRINITY_DN49733_c1_g1_i1 3133 3153 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_455589; TRINITY_DN49733_c1_g1_i2 2665 2685 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_455598; TRINITY_DN49733_c1_g1_i10 3133 3153 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_455592; TRINITY_DN49733_c1_g1_i5 3133 3153 TAGTCTCTGTAAACAGCTCTG BLAST Degradome_Seq
Ll_transcript_370532; TRINITY_DN52915_c0_g1_i1 156 176 TAAATCCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_462508; TRINITY_DN75545_c0_g1_i1 226 246 TAAATCCTGGAAACAACCTTT BLAST Degradome_Seq
Ll_transcript_485911; TRINITY_DN52392_c0_g1_i21 330 350 TGAACTTTGTAATCAAACCTT BLAST Degradome_Seq
Ll_transcript_466427; TRINITY_DN49268_c1_g1_i21 1692 1712 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466411; TRINITY_DN49268_c1_g1_i8 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466428; TRINITY_DN49268_c1_g1_i22 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466423; TRINITY_DN49268_c1_g1_i17 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466426; TRINITY_DN49268_c1_g1_i20 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466403; TRINITY_DN49268_c1_g1_i1 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_455172; TRINITY_DN49700_c1_g1_i2 112 132 TGAATTTTGTAAACAATCTCT BLAST Degradome_Seq
Ll_transcript_455171; TRINITY_DN49700_c1_g1_i1 112 132 TGAATTTTGTAAACAATCTCT BLAST Degradome_Seq
Ll_transcript_466432; TRINITY_DN49268_c1_g1_i25 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466412; TRINITY_DN49268_c1_g1_i9 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466434; TRINITY_DN49268_c1_g1_i27 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466431; TRINITY_DN49268_c1_g1_i24 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466413; TRINITY_DN49268_c1_g1_i10 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466429; TRINITY_DN49268_c1_g1_i23 1857 1877 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466409; TRINITY_DN49268_c1_g1_i6 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466417; TRINITY_DN49268_c1_g1_i12 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466408; TRINITY_DN49268_c1_g1_i5 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466420; TRINITY_DN49268_c1_g1_i14 1691 1711 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_466410; TRINITY_DN49268_c1_g1_i7 1857 1877 TAGAATTTGTAAATAATCTTT BLAST Degradome_Seq
Ll_transcript_395508; TRINITY_DN43504_c0_g1_i4 3278 3298 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_395507; TRINITY_DN43504_c0_g1_i3 3723 3743 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_395505; TRINITY_DN43504_c0_g1_i1 3742 3762 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_395506; TRINITY_DN43504_c0_g1_i2 4187 4207 AAGACTTTGTAAACAGTCTTC BLAST Degradome_Seq
Ll_transcript_327566; TRINITY_DN48058_c4_g2_i19 155 175 CAAATTTTGTAATCAACTTTT BLAST Degradome_Seq
Ll_transcript_333293; TRINITY_DN15791_c0_g1_i1 73 93 AAAATTCTGTAAGTAGTTTTT BLAST Degradome_Seq
Ll_transcript_322581; TRINITY_DN72186_c0_g1_i1 227 247 GAAGCTCTTTAAATAGCCTTT BLAST Degradome_Seq
Ll_transcript_478662; TRINITY_DN19210_c0_g1_i1 96 116 AAAACTTTCTAGATAATCCTT BLAST Degradome_Seq
Ll_transcript_479679; TRINITY_DN52744_c0_g6_i1 246 266 AAGACTTTGTAGGAAACCCTT BLAST Degradome_Seq
Ll_transcript_461640; TRINITY_DN51198_c0_g3_i2 434 454 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_461626; TRINITY_DN51198_c0_g3_i1 631 651 GAAACTTTGTGAAGGACTCTT BLAST Degradome_Seq
Ll_transcript_483598; TRINITY_DN49311_c3_g1_i1 808 828 CAAATTCTGAAAATAGCCTTT BLAST Degradome_Seq
Ll_transcript_413653; TRINITY_DN45610_c0_g1_i1 105 125 AAAACTTTGAAGACAATTCTT BLAST Degradome_Seq
Ll_transcript_442839; TRINITY_DN47854_c4_g1_i1 624 644 CAAATTCTGGAAATAACTTTT BLAST Degradome_Seq
Ll_transcript_302500; TRINITY_DN48259_c3_g1_i5 815 835 CAAACTTTGTAAATAACTTAT BLAST Degradome_Seq
Ll_transcript_376011; TRINITY_DN47789_c1_g3_i2 876 896 CAAATTCTGTAAATAACTTCT BLAST Degradome_Seq
Ll_transcript_376001; TRINITY_DN47789_c1_g3_i1 984 1004 CAAATTCTGTAAATAACTTCT BLAST Degradome_Seq
Ll_transcript_302485; TRINITY_DN48259_c3_g1_i2 1109 1129 CAAACTTTGTAAATAACTTAT BLAST Degradome_Seq
Ll_transcript_302497; TRINITY_DN48259_c3_g1_i4 1570 1590 CAAACTTTGTAAATAACTTAT BLAST Degradome_Seq
Ll_transcript_327544; TRINITY_DN48058_c4_g2_i6 1054 1074 CAAATTTTGTAATCAACTTTT BLAST Degradome_Seq
Ll_transcript_327575; TRINITY_DN48058_c4_g2_i24 1233 1253 CAAATTTTGTAATCAACTTTT BLAST Degradome_Seq
Ll_transcript_327565; TRINITY_DN48058_c4_g2_i18 1457 1477 CAAATTTTGTAATCAACTTTT BLAST Degradome_Seq

Expression of miRNA 488


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)