miRNA 6 details

Id Micro6
SequenceAAGATAAGCGCCTTAGTTCTGA 
Annotated namesaly-miR852-3p; 
Annotated pre-miRNANone

Targets of miRNA 6

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_231177; FTRINITY_DN52353_c1_g1_i1 1081 1102 TTGGGACTAAGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_67123; FTRINITY_DN55039_c1_g2_i4 91 112 CAAGAATTAGGGTGCTTATCTG BLAST psRNATarget
Ll_transcript_69660; FTRINITY_DN55011_c0_g1_i4 444 465 TGTGAATTAAGGTGTTTGTTTT BLAST psRNATarget
Ll_transcript_237607; FTRINITY_DN54454_c0_g2_i1 332 353 AATGATTTAAGGCGCTTATCTA BLAST psRNATarget
Ll_transcript_101139; FTRINITY_DN54925_c3_g1_i13 193 214 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101128; FTRINITY_DN54925_c3_g1_i7 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101129; FTRINITY_DN54925_c3_g1_i8 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101136; FTRINITY_DN54925_c3_g1_i10 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101126; FTRINITY_DN54925_c3_g1_i6 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101125; FTRINITY_DN54925_c3_g1_i5 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_101137; FTRINITY_DN54925_c3_g1_i11 4395 4416 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_125208; FTRINITY_DN55609_c0_g1_i3 3340 3361 TTGAGATTAAGGCGTTTATTTT BLAST psRNATarget
Ll_transcript_141955; FTRINITY_DN54051_c3_g7_i1 941 962 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_141963; FTRINITY_DN54051_c3_g7_i2 1787 1808 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_21770; FTRINITY_DN55123_c0_g1_i2 761 782 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_21775; FTRINITY_DN55123_c0_g1_i7 765 786 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_21772; FTRINITY_DN55123_c0_g1_i4 765 786 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_21771; FTRINITY_DN55123_c0_g1_i3 765 786 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_13744; FTRINITY_DN59252_c2_g7_i1 47 68 GGTGAACTTAGGTGCTTGTCTC BLAST psRNATarget
Ll_transcript_232128; FTRINITY_DN52300_c0_g4_i2 1430 1451 GCAGAACTAAGGCGTTCTTCTT BLAST psRNATarget
Ll_transcript_232132; FTRINITY_DN52300_c0_g4_i3 1702 1723 GCAGAACTAAGGCGTTCTTCTT BLAST psRNATarget
Ll_transcript_232127; FTRINITY_DN52300_c0_g4_i1 1800 1821 GCAGAACTAAGGCGTTCTTCTT BLAST psRNATarget
Ll_transcript_254520; FTRINITY_DN59160_c4_g2_i6 698 719 GTAGAACTAATGTCCTTATCTT BLAST psRNATarget
Ll_transcript_18984; FTRINITY_DN54523_c3_g8_i1 92 113 GGAGAGTTAAGGTGGTTATTTT BLAST psRNATarget
Ll_transcript_200562; FTRINITY_DN56414_c4_g1_i1 1420 1441 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200581; FTRINITY_DN56414_c4_g1_i12 1564 1585 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200575; FTRINITY_DN56414_c4_g1_i7 1467 1488 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200566; FTRINITY_DN56414_c4_g1_i3 1573 1594 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200565; FTRINITY_DN56414_c4_g1_i2 1877 1898 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200583; FTRINITY_DN56414_c4_g1_i14 1304 1325 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_200588; FTRINITY_DN56414_c4_g1_i17 1314 1335 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_226373; FTRINITY_DN56163_c1_g4_i9 2774 2795 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226357; FTRINITY_DN56163_c1_g4_i2 2774 2795 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226358; FTRINITY_DN56163_c1_g4_i3 2936 2957 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226368; FTRINITY_DN56163_c1_g4_i7 2972 2993 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226382; FTRINITY_DN56163_c1_g4_i12 3029 3050 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226369; FTRINITY_DN56163_c1_g4_i8 3134 3155 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226378; FTRINITY_DN56163_c1_g4_i10 3191 3212 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226381; FTRINITY_DN56163_c1_g4_i11 3227 3248 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226360; FTRINITY_DN56163_c1_g4_i5 3389 3410 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_218699; FTRINITY_DN56397_c1_g1_i11 203 224 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_218691; FTRINITY_DN56397_c1_g1_i3 203 224 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_218697; FTRINITY_DN56397_c1_g1_i9 203 224 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_218692; FTRINITY_DN56397_c1_g1_i4 203 224 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_218694; FTRINITY_DN56397_c1_g1_i6 203 224 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_173374; FTRINITY_DN52189_c2_g1_i1 582 603 ATAGAACAAACGCGTTTGTCTT BLAST psRNATarget
Ll_transcript_22909; FTRINITY_DN53888_c1_g1_i1 204 225 AAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_218551; FTRINITY_DN56334_c0_g2_i6 470 491 GGAAAACTGAGGTGCTTTTCTT BLAST psRNATarget
Ll_transcript_226386; FTRINITY_DN56163_c1_g5_i3 282 303 GAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226401; FTRINITY_DN56163_c1_g5_i5 476 497 GAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_226376; FTRINITY_DN56163_c1_g5_i2 1105 1126 GAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_47535; FTRINITY_DN5087_c0_g1_i1 262 283 CCCAAACTGAGGTGCTTCTCTT BLAST psRNATarget
Ll_transcript_439119; TRINITY_DN48332_c1_g3_i5 104 125 CAAGAATTAGGGTGCTTATCTG BLAST psRNATarget
Ll_transcript_326713; TRINITY_DN48094_c0_g3_i1 20 41 TGTGAATTAAGGTGTTTGTTTT BLAST psRNATarget
Ll_transcript_326720; TRINITY_DN48094_c0_g3_i3 444 465 TGTGAATTAAGGTGTTTGTTTT BLAST psRNATarget
Ll_transcript_289119; TRINITY_DN51339_c0_g1_i1 374 395 CTAGGGCTAGGGTGTTTATTTT BLAST psRNATarget
Ll_transcript_352604; TRINITY_DN15479_c0_g2_i1 412 433 TTGAGATTAAGGCGTTTATTTT BLAST psRNATarget
Ll_transcript_378350; TRINITY_DN50787_c1_g1_i10 942 963 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378362; TRINITY_DN50787_c1_g1_i15 942 963 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378333; TRINITY_DN50787_c1_g1_i3 1787 1808 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378341; TRINITY_DN50787_c1_g1_i6 942 963 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378337; TRINITY_DN50787_c1_g1_i4 1788 1809 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378353; TRINITY_DN50787_c1_g1_i12 1788 1809 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378360; TRINITY_DN50787_c1_g1_i14 1788 1809 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_378355; TRINITY_DN50787_c1_g1_i13 1788 1809 AGAGAACTGGGATGCTTATCTT BLAST psRNATarget
Ll_transcript_497430; TRINITY_DN50217_c0_g3_i6 1720 1741 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_497428; TRINITY_DN50217_c0_g3_i5 1720 1741 AGAGAAATGAGTCGCTTATCTT BLAST psRNATarget
Ll_transcript_328425; TRINITY_DN48055_c3_g3_i7 72 93 GGTGAACTTAGGTGCTTGTCTC BLAST psRNATarget
Ll_transcript_328409; TRINITY_DN48055_c3_g3_i1 547 568 GGTGAACTTAGGTGCTTGTCTC BLAST psRNATarget
Ll_transcript_328423; TRINITY_DN48055_c3_g3_i5 637 658 GGTGAACTTAGGTGCTTGTCTC BLAST psRNATarget
Ll_transcript_346536; TRINITY_DN50409_c3_g1_i1 223 244 GTAGAACTAATGTCCTTATCTT BLAST psRNATarget
Ll_transcript_369954; TRINITY_DN48632_c0_g3_i4 1444 1465 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369957; TRINITY_DN48632_c0_g3_i6 1444 1465 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369949; TRINITY_DN48632_c0_g3_i3 1444 1465 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369945; TRINITY_DN48632_c0_g3_i1 1703 1724 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369956; TRINITY_DN48632_c0_g3_i5 1910 1931 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369959; TRINITY_DN48632_c0_g3_i7 2266 2287 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_369964; TRINITY_DN48632_c0_g3_i8 2266 2287 ACGGAATCAAGGTGCTTGTCTA BLAST psRNATarget
Ll_transcript_532755; TRINITY_DN50048_c2_g1_i14 2026 2047 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532763; TRINITY_DN50048_c2_g1_i22 2224 2245 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532758; TRINITY_DN50048_c2_g1_i17 2026 2047 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532757; TRINITY_DN50048_c2_g1_i16 2281 2302 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532746; TRINITY_DN50048_c2_g1_i5 2764 2785 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532753; TRINITY_DN50048_c2_g1_i12 2764 2785 AAAGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_489947; TRINITY_DN50361_c0_g1_i5 188 209 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_489944; TRINITY_DN50361_c0_g1_i2 188 209 GTAGCACTATGGCGCTTGTTTT BLAST psRNATarget
Ll_transcript_383861; TRINITY_DN47204_c0_g3_i8 452 473 ATAGAACAAACGCGTTTGTCTT BLAST psRNATarget
Ll_transcript_383855; TRINITY_DN47204_c0_g3_i5 452 473 ATAGAACAAACGCGTTTGTCTT BLAST psRNATarget
Ll_transcript_383859; TRINITY_DN47204_c0_g3_i7 452 473 ATAGAACAAACGCGTTTGTCTT BLAST psRNATarget
Ll_transcript_310033; TRINITY_DN47137_c6_g1_i1 192 213 AAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_532743; TRINITY_DN50048_c2_g2_i1 255 276 GAGGGGTTAAGGAGCTTATTTT BLAST psRNATarget
Ll_transcript_437487; TRINITY_DN48935_c3_g1_i6 449 470 ATGGAAGTAAGTTGTTTATCTT BLAST psRNATarget
Ll_transcript_521059; TRINITY_DN46534_c4_g2_i5 83 104 AACAAACTAGGGTGTTTGTTTT BLAST psRNATarget
Ll_transcript_437486; TRINITY_DN48935_c3_g1_i5 449 470 ATGGAAGTAAGTTGTTTATCTT BLAST psRNATarget
Ll_transcript_521068; TRINITY_DN46534_c4_g2_i8 83 104 AACAAACTAGGGTGTTTGTTTT BLAST psRNATarget
Ll_transcript_440230; TRINITY_DN48379_c10_g1_i9 239 260 CCCAAACTGAGGTGCTTCTCTT BLAST psRNATarget
Ll_transcript_440223; TRINITY_DN48379_c10_g1_i3 239 260 CCCAAACTGAGGTGCTTCTCTT BLAST psRNATarget
Ll_transcript_440228; TRINITY_DN48379_c10_g1_i8 239 260 CCCAAACTGAGGTGCTTCTCTT BLAST psRNATarget
Ll_transcript_440221; TRINITY_DN48379_c10_g1_i1 239 260 CCCAAACTGAGGTGCTTCTCTT BLAST psRNATarget
Ll_transcript_494678; TRINITY_DN13372_c0_g1_i1 59 80 TTTGAACTTGGTCGCTTGTCTT BLAST psRNATarget

Expression of miRNA 6


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)