miRNA 86 details

Id Micro86
SequenceCCGATGGTTGTTCTACAGGTG 
Annotated namesosa-miR5515; 
Annotated pre-miRNANone

Targets of miRNA 86

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_246983; FTRINITY_DN53391_c0_g1_i6 687 707 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246995; FTRINITY_DN53391_c0_g1_i17 747 767 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246977; FTRINITY_DN53391_c0_g1_i1 1075 1095 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246987; FTRINITY_DN53391_c0_g1_i10 1622 1642 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246978; FTRINITY_DN53391_c0_g1_i2 1799 1819 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246984; FTRINITY_DN53391_c0_g1_i7 1896 1916 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246993; FTRINITY_DN53391_c0_g1_i16 1799 1819 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246979; FTRINITY_DN53391_c0_g1_i3 2127 2147 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_246997; FTRINITY_DN53391_c0_g1_i19 2224 2244 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_43740; FTRINITY_DN54115_c3_g3_i1 968 988 CACGTGTAGAACAATTATTGG BLAST psRNATarget
Ll_transcript_60438; FTRINITY_DN56245_c0_g1_i12 438 458 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60442; FTRINITY_DN56245_c0_g1_i16 590 610 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60440; FTRINITY_DN56245_c0_g1_i14 724 744 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60435; FTRINITY_DN56245_c0_g1_i9 1504 1524 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60427; FTRINITY_DN56245_c0_g1_i1 1529 1549 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60439; FTRINITY_DN56245_c0_g1_i13 724 744 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60443; FTRINITY_DN56245_c0_g1_i17 812 832 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60436; FTRINITY_DN56245_c0_g1_i10 724 744 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60431; FTRINITY_DN56245_c0_g1_i5 1852 1872 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60433; FTRINITY_DN56245_c0_g1_i7 1876 1896 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60428; FTRINITY_DN56245_c0_g1_i2 1877 1897 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60430; FTRINITY_DN56245_c0_g1_i4 1901 1921 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_60441; FTRINITY_DN56245_c0_g1_i15 1480 1500 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_261530; FTRINITY_DN51224_c0_g2_i3 151 171 CACCTGTGGAAAGGTCATCGG BLAST psRNATarget
Ll_transcript_228262; FTRINITY_DN52767_c1_g1_i1 408 428 TATTTGTAGAATAACTATTGT BLAST psRNATarget
Ll_transcript_42270; FTRINITY_DN91238_c0_g1_i1 212 232 GACCTGTAAAGCAAACATCGG BLAST psRNATarget
Ll_transcript_136954; FTRINITY_DN58089_c0_g1_i36 1408 1428 TATATGTAGAACAACCGTTGC BLAST psRNATarget
Ll_transcript_136949; FTRINITY_DN58089_c0_g1_i31 1408 1428 TATATGTAGAACAACCGTTGC BLAST psRNATarget
Ll_transcript_136947; FTRINITY_DN58089_c0_g1_i29 1408 1428 TATATGTAGAACAACCGTTGC BLAST psRNATarget
Ll_transcript_95745; FTRINITY_DN49484_c0_g1_i2 1104 1124 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_43741; FTRINITY_DN54115_c3_g4_i1 1003 1023 CACGTGGAGAACAATTATTGG BLAST psRNATarget
Ll_transcript_95747; FTRINITY_DN49484_c0_g1_i4 1256 1276 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_95748; FTRINITY_DN49484_c0_g1_i5 1498 1518 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_95744; FTRINITY_DN49484_c0_g1_i1 1581 1601 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_95746; FTRINITY_DN49484_c0_g1_i3 1733 1753 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_260289; FTRINITY_DN57925_c1_g1_i13 1355 1375 TACTTGGAGGACAACCACCGG BLAST psRNATarget
Ll_transcript_594; FTRINITY_DN54633_c1_g1_i3 937 957 AATCTGAAGAATAGTCATTGG BLAST psRNATarget
Ll_transcript_592; FTRINITY_DN54633_c1_g1_i1 937 957 AATCTGAAGAATAGTCATTGG BLAST psRNATarget
Ll_transcript_108499; FTRINITY_DN50772_c0_g3_i1 870 890 CCCTTGTAGGGTAGCTATTGG BLAST psRNATarget
Ll_transcript_60594; FTRINITY_DN56237_c1_g1_i9 1265 1285 AATTTGCTGAACAACCATTGG BLAST psRNATarget
Ll_transcript_376218; TRINITY_DN47710_c1_g3_i6 1801 1821 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_376210; TRINITY_DN47710_c1_g3_i2 1801 1821 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_376217; TRINITY_DN47710_c1_g3_i5 2129 2149 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_376221; TRINITY_DN47710_c1_g3_i8 2226 2246 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_376230; TRINITY_DN47710_c1_g3_i10 2409 2429 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_376212; TRINITY_DN47710_c1_g3_i3 2409 2429 ATCCTGCAGAGCGACCATCGG BLAST psRNATarget
Ll_transcript_473967; TRINITY_DN52050_c2_g3_i1 826 846 CACGTGTAGAACAATTATTGG BLAST psRNATarget
Ll_transcript_294246; TRINITY_DN55141_c0_g1_i1 252 272 AAGCTGTAGGACAACCATTGA BLAST psRNATarget
Ll_transcript_471029; TRINITY_DN42833_c0_g2_i1 552 572 AAACTGTGGAACAACCATTGA BLAST psRNATarget
Ll_transcript_472609; TRINITY_DN52014_c1_g1_i3 730 750 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472604; TRINITY_DN52014_c1_g1_i2 730 750 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472594; TRINITY_DN52014_c1_g1_i1 872 892 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472601; TRINITY_DN52014_c1_g3_i5 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472606; TRINITY_DN52014_c1_g3_i7 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472599; TRINITY_DN52014_c1_g3_i3 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472612; TRINITY_DN52014_c1_g3_i9 1743 1763 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472615; TRINITY_DN52014_c1_g3_i10 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472618; TRINITY_DN52014_c1_g3_i11 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472596; TRINITY_DN52014_c1_g3_i1 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472605; TRINITY_DN52014_c1_g3_i6 1371 1391 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_472598; TRINITY_DN52014_c1_g3_i2 1743 1763 GGGCTGGAGGACAACCATTGG BLAST psRNATarget
Ll_transcript_516658; TRINITY_DN50810_c1_g6_i2 85 105 CACCTGTGGAAAGGTCATCGG BLAST psRNATarget
Ll_transcript_516652; TRINITY_DN50810_c1_g6_i1 85 105 CACCTGTGGAAAGGTCATCGG BLAST psRNATarget
Ll_transcript_282962; TRINITY_DN46157_c2_g4_i1 777 797 TATTTGTAGAATAACTATTGT BLAST psRNATarget
Ll_transcript_431965; TRINITY_DN52109_c0_g3_i9 1371 1391 TATATGTAGAACAACCGTTGC BLAST psRNATarget
Ll_transcript_431977; TRINITY_DN52109_c0_g3_i18 1371 1391 TATATGTAGAACAACCGTTGC BLAST psRNATarget
Ll_transcript_288865; TRINITY_DN51357_c2_g2_i1 1035 1055 CACGTGGAGAACAATTATTGG BLAST psRNATarget
Ll_transcript_288870; TRINITY_DN51357_c2_g2_i4 1045 1065 CACGTGGAGAACAATTATTGG BLAST psRNATarget
Ll_transcript_411024; TRINITY_DN44927_c0_g1_i6 1121 1141 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_411023; TRINITY_DN44927_c0_g1_i5 1515 1535 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_411022; TRINITY_DN44927_c0_g1_i4 1588 1608 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_411021; TRINITY_DN44927_c0_g1_i3 1598 1618 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_411020; TRINITY_DN44927_c0_g1_i2 2065 2085 TGCCTGTGGTACCACCATCGG BLAST psRNATarget
Ll_transcript_519027; TRINITY_DN51272_c1_g3_i8 1353 1373 TACTTGGAGGACAACCACCGG BLAST psRNATarget
Ll_transcript_519017; TRINITY_DN51272_c1_g3_i3 1353 1373 TACTTGGAGGACAACCACCGG BLAST psRNATarget
Ll_transcript_381155; TRINITY_DN51483_c2_g4_i1 1582 1602 AATCTGAAGAATAGTCATTGG BLAST psRNATarget
Ll_transcript_381157; TRINITY_DN51483_c2_g4_i3 1582 1602 AATCTGAAGAATAGTCATTGG BLAST psRNATarget
Ll_transcript_327164; TRINITY_DN48076_c0_g1_i9 1248 1268 AATTTGCTGAACAACCATTGG BLAST psRNATarget
Ll_transcript_327163; TRINITY_DN48076_c0_g1_i8 1343 1363 AATTTGCTGAACAACCATTGG BLAST psRNATarget

Expression of miRNA 86


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)