ta-siRNA 120 details

ID120
SequenceCAACTGGACTATTCTTGAAACC 

Targets of siRNA 120

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_5087; 148 169 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_77546; 151 172 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_5082; 146 167 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_5089; 146 167 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_5088; 858 879 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_5081; 3354 3375 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_5086; 113 134 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_273224; 85 106 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_273227; 39 60 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_273230; 85 106 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_273235; 39 60 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_126759; 144 165 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_259872; 294 315 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_137571; 1503 1524 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_172576; 100 121 GGTTTCAAGAATATTCCAGTTG BLAST
Ll_transcript_169135; 75 96 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_169119; 133 154 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_273236; 84 105 GGTTTTAAGAATAGTCCAGTTT BLAST
Ll_transcript_273229; 36 57 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_188572; 153 174 GGTTTCAAGAATAGTCCAATTA BLAST
Ll_transcript_77567; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77571; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_188581; 331 352 GGTTTCAAGAATAGTCCAATTA BLAST
Ll_transcript_188575; 342 363 GGTTTCAAGAATAGTCCAATTA BLAST
Ll_transcript_77561; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77556; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77554; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77570; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77569; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77560; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_77557; 70 91 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169124; 2705 2726 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169136; 2842 2863 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169120; 2894 2915 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169129; 2919 2940 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169128; 2924 2945 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_188578; 2945 2966 GGTTTCAAGAATAGTCCAATTA BLAST
Ll_transcript_169130; 2976 2997 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169137; 3059 3080 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169111; 3084 3105 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169134; 3113 3134 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_169118; 3221 3242 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_130402; 369 390 TCTTCCAAGAATAGTCCAATTG BLAST
Ll_transcript_278194; 67 88 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_494260; 759 780 GGTTTCAAGAATAGTCCAGTTG BLAST
Ll_transcript_493577; 151 172 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_529679; 40 61 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_529680; 40 61 GGTTTCAAGAATAGTCCAGTTT BLAST
Ll_transcript_491196; 29 50 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_468013; 193 214 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_491192; 2 23 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_491201; 29 50 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_468012; 321 342 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_468002; 567 588 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_353410; 1138 1159 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_468010; 1519 1540 GGTTTCAAGAATAGTCCAGTTA BLAST
Ll_transcript_493595; 56 77 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_453808; 108 129 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_493591; 56 77 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_417704; 2738 2759 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_417711; 2769 2790 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_417697; 3833 3854 GGTTTCAAGAATAGTCCAATTG BLAST
Ll_transcript_530254; 764 785 GCTTTTAAGAATAGTCCAGTTA BLAST
Ll_transcript_278197; 60 81 GGTTTCAAGAATATTCCAGTTA BLAST
Ll_transcript_278202; 202 223 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_278185; 346 367 GGTTTCAAGAACAGTCCAGTTA BLAST
Ll_transcript_278208; 432 453 GGTTTCAAGAACAGTCCAGTTA BLAST

Expression of siRNA 120


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)