ta-siRNA 138 details

ID138
SequenceCCGGGGACGTAGGCACAATTGGCC 

Targets of siRNA 138

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_49912; 219 242 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_114407; 1 20 AATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_114410; 1 20 AATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_114408; 1 20 AATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_114411; 1 20 AATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_114409; 1 20 AATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_72900; 285 308 GGTCAATTGTGCCTACGTCCCCGA BLAST
Ll_transcript_72919; 284 307 GGTCAATTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34856; 12 35 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_34841; 259 282 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_34846; 259 282 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_34839; 259 282 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_34863; 259 282 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_203945; 446 469 GGCCAATTGCGCCTACGTCCCCGG BLAST
Ll_transcript_122556; 587 610 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_49914; 721 744 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_141845; 789 812 GGCCAATTGCGCCTACGTCCCCGG BLAST
Ll_transcript_42615; 1343 1366 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_50076; 85 108 GGCCAATTGTGCCTATGTCCCCGG BLAST
Ll_transcript_257020; 229 252 GACCAATTGTGTCTACGTCCCCGG BLAST
Ll_transcript_16807; 32 55 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34857; 1489 1512 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34848; 1523 1546 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34853; 1568 1591 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34842; 1602 1625 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_34847; 261 284 GGCCAACTGTGCCTACGTCCTCGG BLAST
Ll_transcript_34836; 855 878 GGCCAACTGTGCCTACGTCCTCGG BLAST
Ll_transcript_34834; 77 100 GGCCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_177021; 114 137 GACCAACTGTGTCTACGTCCCCGG BLAST
Ll_transcript_42612; 131 154 GGTCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_42611; 131 154 GGTCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_34859; 259 282 GGCCAACTATTCCTACGTCCCCGG BLAST
Ll_transcript_34840; 259 282 GGCCAACTATTCCTACGTCCCCGG BLAST
Ll_transcript_303508; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303498; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303492; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303511; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303502; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303494; 37 60 GGCCAATTGTGCCTACGTCCCCGG BLAST
Ll_transcript_303483; 239 262 GGTCAATTGTGCCTACGTCCCCGA BLAST
Ll_transcript_303504; 376 399 GGTCAATTGTGCCTACGTCCCCGA BLAST
Ll_transcript_438679; 43 66 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_445279; 278 301 GGCCAATTGCGCCTACGTCCCCGG BLAST
Ll_transcript_293255; 437 460 GGCCAATTGCGCCTACGTCCCCGG BLAST
Ll_transcript_463821; 89 112 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_463826; 89 112 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_463852; 89 112 GGCCAACTGTGCCTACGTCCCCGG BLAST
Ll_transcript_475770; 120 143 GGCCAATTGTGCCTATGTCCCCGG BLAST
Ll_transcript_410098; 148 171 GGCCAACTGTGCCTACGTCCCCGA BLAST
Ll_transcript_370894; 109 132 AGCCAACTGTGCCTACGTCCTCGG BLAST
Ll_transcript_368265; 159 182 GGCCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_493305; 68 91 GGCCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_438657; 22 45 GGTCAACTGTGCCTACATCCCCGG BLAST
Ll_transcript_493303; 76 99 GGCCAACTATTCCTACGTCCCCGG BLAST
Ll_transcript_11286; 871 897 GGCCAATTGTGGCTACTGTGTCCCATA BLAST
Ll_transcript_279662; 1294 1320 GGCCAATTGTGGCTACTGTGTCCCATA BLAST

Expression of siRNA 138


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)