ta-siRNA 18 details

ID18
SequenceTATACGATTTCTTACTGCACTGTA 

Targets of siRNA 18

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_85004; 91 114 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_85006; 157 180 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_85000; 117 140 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_85002; 157 180 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_112336; 14 37 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_85003; 485 508 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_112335; 532 555 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_112333; 14 37 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_112337; 14 37 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_114369; 78 101 TACACTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_50418; 87 110 TATAGTGCAGTAAGAAATCGTGTA BLAST
Ll_transcript_85005; 242 265 TACAGTGCAGTAAGAAATCTTATA BLAST
Ll_transcript_85001; 242 265 TACAGTGCAGTAAGAAATCTTATA BLAST
Ll_transcript_247241; 146 169 AATAGAGCACTAAGAAATCGTATT BLAST
Ll_transcript_161564; 807 830 AACGGAAGAGTAAGAAATCGTATA BLAST
Ll_transcript_348460; 184 207 TACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460519; 174 197 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460533; 178 201 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460534; 174 197 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460520; 174 197 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460516; 178 201 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460528; 178 201 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460503; 174 197 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460521; 178 201 CACAGTGCAGTAAGAAATCGTATA BLAST
Ll_transcript_460505; 3 26 TACAGTGCAGAAAGAAATCGTATA BLAST
Ll_transcript_460517; 193 216 TATAGTGCAATAAGAAATCGTATA BLAST
Ll_transcript_460527; 667 690 TATAGTGCAGTAAGAAATCGTGTA BLAST
Ll_transcript_460526; 730 753 TATAGTGCAGTAAGAAATCGTGTA BLAST
Ll_transcript_460512; 184 207 TACAGCGCCGTAAGAAATCGTATA BLAST
Ll_transcript_460502; 193 216 TACAGCGCCGTAAGAAATCGTATA BLAST
Ll_transcript_455727; 318 341 AATAGAGCACTAAGAAATCGTATT BLAST
Ll_transcript_514900; 787 810 AACGGAAGAGTAAGAAATCGTATA BLAST
Ll_transcript_114371; 54 77 GACAGTGCAGTAAGAATTCGATAA BLAST

Expression of siRNA 18


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)