ta-siRNA 180 details

ID180
SequenceAGTGAAGACGACTTCTGTATGTGA 

Targets of siRNA 180

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_254106; 66 88 TCAGTACAGAAGTCGTCTTCAGC BLAST
Ll_transcript_313216; 1356 1379 CTTCATACAGAAGTCGTATTCACT BLAST
Ll_transcript_313212; 1858 1881 CTTCATACAGAAGTCGTATTCACT BLAST
Ll_transcript_313198; 1865 1888 CTTCATACAGAAGTCGTATTCACT BLAST
Ll_transcript_449511; 120 142 TCTCTACATAAGTCGTCTTCACC BLAST
Ll_transcript_284005; 93 119 TCAACCCATATAGAAGTCGTCTTGACT BLAST
Ll_transcript_449501; 375 398 AGTCGTACTGAAGTCGTCTTCGTG BLAST
Ll_transcript_449507; 275 298 AGTCGTACTGAAGTCGTCTTCGTG BLAST

Expression of siRNA 180


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)