ta-siRNA 221 details

ID221
SequenceATTGCGGACTACAACACATGATGT 

Targets of siRNA 221

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_241759; 5064 5087 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_241765; 5171 5194 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_241760; 5497 5520 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_241766; 5604 5627 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_143694; 297 320 ACATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_171064; 32 55 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_150576; 311 334 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91826; 301 324 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91825; 301 324 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_64654; 422 445 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91824; 301 324 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_106836; 282 305 ACATTAGGTGTTGTGGTCCGCAAT BLAST
Ll_transcript_142276; 154 177 GTATCACGTGTTGTGGTCCGCAAT BLAST
Ll_transcript_25536; 413 436 ACATCAGGTGTTGTAGTCCACAAT BLAST
Ll_transcript_135377; 1191 1214 GCATCATGTGATGTAGTACGCAAT BLAST
Ll_transcript_135390; 1226 1249 GCATCATGTGATGTAGTACGCAAT BLAST
Ll_transcript_91828; 1 22 ATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91827; 1 22 ATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91830; 1 22 ATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_91831; 1 22 ATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_106845; 771 794 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_106843; 1053 1076 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_106861; 1157 1180 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_106854; 1158 1181 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_106863; 1377 1400 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_106856; 1497 1520 TCATCATGTGATGCAGTCCGCAAT BLAST
Ll_transcript_347704; 178 201 ACATCATGTGTTGTAGTCCGCAAT BLAST
Ll_transcript_378882; 5050 5073 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_378875; 5157 5180 GCATCATGTGATGTAGTCCGCAAT BLAST
Ll_transcript_449517; 144 167 ACATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_447925; 84 107 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_344996; 226 249 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_424505; 541 564 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_447962; 84 107 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_424520; 969 992 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_424522; 374 397 GCATCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_289578; 899 922 GCATCATGTGGTGTGGTCCGCAAT BLAST
Ll_transcript_440007; 453 476 ACATTAGGTGTTGTGGTCCGCAAT BLAST
Ll_transcript_289592; 899 922 GCATCATGTGGTGTGGTCCGCAAT BLAST
Ll_transcript_440016; 453 476 ACATTAGGTGTTGTGGTCCGCAAT BLAST
Ll_transcript_424523; 25 48 ATGTCATGTGATGTGGTCCGCAAT BLAST
Ll_transcript_493842; 157 180 ACATCAGGTGTTGTAGTCCACAAT BLAST
Ll_transcript_369159; 277 300 GTATCACGTGTTGTGGTCCGCAAT BLAST
Ll_transcript_518722; 1250 1273 GCATCATGTGATGTAGTACGCAAT BLAST

Expression of siRNA 221


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)