ta-siRNA 270 details

ID270
SequenceAGAGTCTGTTTCTACGATTAGAAC 

Targets of siRNA 270

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_220958; 1857 1880 GTTCAAATCTTAGAAACAGACTCT BLAST
Ll_transcript_176446; 423 446 ATTCAAATTCTAGAAACAGACTCT BLAST
Ll_transcript_176445; 585 608 ATTCAAATTCTAGAAACAGACTCT BLAST
Ll_transcript_169080; 595 618 GTTTAAATCCTGGAAACAGACTCT BLAST
Ll_transcript_40133; 397 420 TTTCAAATCCTAGAAATAGACTCT BLAST
Ll_transcript_90398; 280 303 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_228057; 142 165 GTTCGAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_224289; 213 236 GTTCGAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_246267; 179 202 GTTCAAATCCTAAAAACAGACTCT BLAST
Ll_transcript_90379; 348 371 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_130103; 585 608 GTTCAAATCTTAGAAACAGCCTCT BLAST
Ll_transcript_210716; 658 681 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_210714; 733 756 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_147918; 476 499 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_210692; 917 940 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_75208; 1375 1398 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_147919; 422 445 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_147913; 440 463 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_210696; 917 940 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_147897; 517 540 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_147911; 440 463 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_147920; 517 540 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_23100; 1804 1827 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23101; 1804 1827 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23103; 2087 2110 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23111; 2265 2288 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23102; 2184 2207 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23123; 2265 2288 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23106; 2362 2385 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23119; 2434 2457 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23099; 2439 2462 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23120; 2522 2545 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_262644; 1461 1484 GTTCAAATCATTGAAACAGACTCT BLAST
Ll_transcript_23104; 2548 2571 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_210701; 917 940 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_23098; 2645 2668 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_106011; 553 576 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_23108; 2895 2918 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_23105; 2983 3006 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_105935; 3444 3467 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_105931; 3734 3757 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_18036; 334 357 GTTTAAATCCTAGAAACAAACTCT BLAST
Ll_transcript_18035; 335 358 GTTTAAATCCTAGAAACAAACTCT BLAST
Ll_transcript_356739; 1802 1825 GTTCAAATCTTAGAAACAGACTCT BLAST
Ll_transcript_427251; 497 520 ATTCAAATTCTAGAAACAGACTCT BLAST
Ll_transcript_408400; 525 548 GTTTAAATCCTGGAAACAGACTCT BLAST
Ll_transcript_389594; 369 392 TTTCAAATCCTAGAAATAGACTCT BLAST
Ll_transcript_310488; 20 43 GTTCGAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_332932; 53 76 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_346424; 159 182 GTTCGAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_379207; 185 208 GTTCAAATCCTAAAAACAGACTCT BLAST
Ll_transcript_346450; 220 243 GTTCGAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_378514; 207 230 GTTCAAATCTTAGAAACAGCCTCT BLAST
Ll_transcript_370189; 342 365 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_423689; 203 226 GTTCAAATCATTGAAACAGACTCT BLAST
Ll_transcript_327107; 595 618 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_277463; 394 417 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_338627; 40 63 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_338104; 451 474 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_338102; 526 549 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_430543; 1137 1160 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_338109; 866 889 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_338628; 40 63 GTTCAAATCCTAGAAACAGTCTCT BLAST
Ll_transcript_338106; 866 889 GTTCAAATCTTAGAAACAGTCTCT BLAST
Ll_transcript_358932; 1800 1823 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358949; 1897 1920 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358930; 1912 1935 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358938; 2083 2106 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358937; 2180 2203 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358929; 2261 2284 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358940; 2358 2381 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358925; 2373 2396 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358948; 2544 2567 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_358941; 2641 2664 GTTCAAATCCTAGAAACAGCCTCT BLAST
Ll_transcript_468638; 223 246 GATCAAATCTTAGAAACAGATTCT BLAST
Ll_transcript_420191; 192 215 GCTCAAATCCTGGAAACAGACTCT BLAST
Ll_transcript_458520; 1502 1525 GTTTAAATCCTAGAAACAAACTCT BLAST

Expression of siRNA 270


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)