ta-siRNA 278 details

ID278
SequenceTTGTGTTGCAAGAGTACTGGACGT 

Targets of siRNA 278

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_148879; 201 224 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_148874; 467 490 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_148884; 611 634 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_148890; 1100 1123 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_148878; 207 230 ACATCTAGTACTCTTGCAACACAA BLAST
Ll_transcript_148880; 338 361 ACATCTAGTACTCTTGCAACACAA BLAST
Ll_transcript_83594; 38 61 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_148889; 207 230 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238330; 233 256 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_83599; 38 61 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_83596; 38 61 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_148883; 338 361 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238325; 332 355 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238319; 332 355 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_148873; 73 96 ACATCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_148887; 73 96 ACATCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238314; 152 175 ACATCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238327; 233 256 ACATCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_115342; 178 201 ACGTCTAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238317; 413 436 ACGTCTAGTACTCTTGCAGCACAA BLAST
Ll_transcript_115339; 595 618 ACGTCTAGTACTCTTGCAGCACAA BLAST
Ll_transcript_115354; 643 666 ACGTCTAGTACTCTTGCAGCACAA BLAST
Ll_transcript_238324; 152 175 ACATCCAGTATTCTTACAACACAA BLAST
Ll_transcript_493917; 44 67 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_493930; 44 67 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_493915; 44 67 ACGTCCAGTACTCTTGCAACACAA BLAST
Ll_transcript_410610; 25 48 ACATCTAGTACTCTTGCAACACAA BLAST
Ll_transcript_410617; 25 48 ACATCTAGTACTCTTGCAACACAA BLAST
Ll_transcript_410614; 25 48 ACATCTAGTACTCTTGCAACACAA BLAST
Ll_transcript_439702; 405 428 ACTTGCAATACTCTTGCAACACAA BLAST
Ll_transcript_439703; 561 584 ACTTGCAATACTCTTGCAACACAA BLAST
Ll_transcript_410611; 340 363 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_410604; 587 610 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_492608; 931 954 ACGTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_409437; 157 180 ACCTCCAGTACTCTTGCAGCACAA BLAST
Ll_transcript_410599; 835 858 ACGTCTAGTACTCTTGCAGCACAA BLAST
Ll_transcript_410600; 163 186 ACGTCCAATACTCTTGCAGCACAA BLAST
Ll_transcript_410619; 223 246 ACGTCCAATACTCTTGCAGCACAA BLAST
Ll_transcript_410616; 266 289 ACGTCCAATACTCTTGCAGCACAA BLAST
Ll_transcript_440752; 566 589 ATATCTAGTACTCTTGCCACACAA BLAST

Expression of siRNA 278


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)