ta-siRNA 288 details

ID288
SequenceATGAGAACTGTTCTCACTTGAGTC 

Targets of siRNA 288

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_238672; 110 133 GACTCAAGTGAGAACAGTTCTCAT BLAST
Ll_transcript_238658; 110 133 GACTCAAGTGAGAACAGTTCTCAT BLAST
Ll_transcript_253391; 177 200 GACTCAAGTGAGAATAGTTCTCAT BLAST
Ll_transcript_112375; 619 642 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112391; 1376 1399 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112384; 1405 1428 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112387; 1429 1452 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112385; 1691 1714 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112379; 2259 2282 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_112382; 2288 2311 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_262789; 17 40 GGCTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_12569; 359 382 GGCTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_182670; 118 141 GATTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_155206; 339 362 AACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_212318; 906 929 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_212319; 906 929 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_212320; 906 929 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_181084; 670 695 GAGCTACAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_56231; 1083 1106 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_56246; 1382 1405 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_56218; 1430 1453 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_56215; 1643 1666 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_56220; 1659 1682 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_155202; 2045 2068 AAGTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_94680; 1176 1199 GATTCAAGTTAGAACAGTTCTTAT BLAST
Ll_transcript_91085; 143 166 GATTCAAGTAAAAACAGTTCTCAT BLAST
Ll_transcript_234554; 162 185 AACTCAAGTAAGAACAATTCTCAT BLAST
Ll_transcript_23803; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_23805; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_23815; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_23810; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_23802; 688 711 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_182677; 286 309 GACCCAAGGGAGAACAATTCTCAT BLAST
Ll_transcript_93257; 28 51 GACCCAAGGGAGAACAATTCTCAT BLAST
Ll_transcript_78519; 855 878 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78518; 747 770 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78527; 884 907 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78524; 747 770 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78522; 1197 1220 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78526; 1236 1259 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78525; 1384 1407 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78529; 1409 1432 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78523; 1481 1504 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78528; 1578 1601 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_78521; 1675 1698 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_315933; 477 500 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_347211; 816 839 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315929; 1135 1158 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315939; 1426 1449 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315938; 1455 1478 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315936; 1743 1766 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315937; 1772 1795 GACTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_331912; 348 371 GATTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_345600; 440 463 GGCTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_331903; 348 371 GATTCAAGTGAGAACAATTCTCAT BLAST
Ll_transcript_442303; 2856 2879 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_442307; 2856 2879 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_442302; 2856 2879 CACTCAAGTGAGAAAAGTTCTCAT BLAST
Ll_transcript_438730; 976 999 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_438737; 1100 1123 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_438741; 1330 1353 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_438731; 1528 1551 TACTGAAGTGAGAACATTTCTCAT BLAST
Ll_transcript_377795; 1983 2006 GACTCAAATGAGAACAATTCTCAT BLAST
Ll_transcript_377788; 1985 2008 GACTCAAATGAGAACAATTCTCAT BLAST
Ll_transcript_377790; 1987 2010 GACTCAAATGAGAACAATTCTCAT BLAST
Ll_transcript_331891; 319 342 GATTCAAGTAAAAACAGTTCTCAT BLAST
Ll_transcript_512571; 1090 1113 AACTCAAGTAAGAACAATTCTCAT BLAST
Ll_transcript_512586; 1167 1190 AACTCAAGTAAGAACAATTCTCAT BLAST
Ll_transcript_315538; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315542; 526 549 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315529; 695 718 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315533; 737 760 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315546; 695 718 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315541; 737 760 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315535; 926 949 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_315537; 926 949 AACTCTAGTGAGAACAATTCTCAT BLAST
Ll_transcript_368809; 205 228 GACCCAAGGGAGAACAATTCTCAT BLAST
Ll_transcript_439761; 688 711 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_439771; 751 774 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_439766; 688 711 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_439773; 751 774 CATTCTGGTGAGAACAGTTCTCAC BLAST
Ll_transcript_439768; 859 882 CATTCTGGTGAGAACAGTTCTCAC BLAST

Expression of siRNA 288


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)