ta-siRNA 309 details

ID309
SequenceAAGCGATCGTTGCGCAGCATTGGC 

Targets of siRNA 309

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_88775; 137 160 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_88780; 641 664 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_88761; 863 886 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_34860; 191 214 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_48597; 38 61 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_34837; 191 214 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_34849; 540 563 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_171644; 51 74 GTCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_43991; 1160 1183 TCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_177002; 132 155 GCCAACGCTGTGCAACGATCGCTT BLAST
Ll_transcript_177001; 167 190 GCCAACGCTGTGCAACGATCGCTT BLAST
Ll_transcript_16797; 194 217 ACCAACGCTACGCAACGATCGCTT BLAST
Ll_transcript_34398; 1 24 ACCAACGCTACGCAACGATCGCTT BLAST
Ll_transcript_31101; 1 22 CAACGTTGCGCAACGATCGCTT BLAST
Ll_transcript_16798; 421 444 ACCAACGCTACGCAACGATCGCTT BLAST
Ll_transcript_34386; 1 24 ACCAACGCTACGCAACGATCGCTT BLAST
Ll_transcript_176989; 88 111 GCCAACGCTGCGCAATGATCGCTT BLAST
Ll_transcript_169127; 61 84 GCCAACGCTGCGCAACAATCGCTT BLAST
Ll_transcript_169141; 73 96 GCCAACGCTGCGCAACAATCGCTT BLAST
Ll_transcript_177013; 1129 1152 GCCAACGCTGCGCAACAATCGCTT BLAST
Ll_transcript_177003; 1176 1199 GCCAACGCTGCGCAACAATCGCTT BLAST
Ll_transcript_198433; 84 107 GTCAACGCTGCGCAACGATGGCTT BLAST
Ll_transcript_257039; 19 42 ACCAACGCTGCGCAACGATCGCAT BLAST
Ll_transcript_34854; 191 214 GTCAACGCTATGCAACGATCGCTT BLAST
Ll_transcript_257053; 5 28 GTCAACGCTATGCAACGATCGCTT BLAST
Ll_transcript_389289; 56 79 GCCAATGCTGCGCAACGATCGCTT BLAST
Ll_transcript_389282; 56 79 GCCAATGCTGCGCAACGATCGCTT BLAST
Ll_transcript_410085; 302 325 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_410093; 303 326 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_410101; 750 773 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_368252; 891 914 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_368253; 911 934 GCCAATGCTGTGCAACGATCGCTT BLAST
Ll_transcript_354883; 151 174 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_463818; 18 41 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_443458; 36 59 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_438671; 183 206 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_443457; 36 59 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_316715; 2 25 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_471983; 9 32 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_471988; 9 32 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_463846; 18 41 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_463819; 22 45 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_463851; 22 45 GCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_370898; 132 155 GTCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_421971; 1092 1115 CCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_421970; 1116 1139 TCCAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_389286; 1 22 CAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_389274; 1 22 CAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_389283; 1 22 CAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_389277; 1 22 CAACGCTGCGCAACGATCGCTT BLAST
Ll_transcript_373356; 41 64 GGCAATGCTGCCCAACGATCGCTT BLAST
Ll_transcript_505744; 116 139 ACCAACGCTACGCAACGATCGCTT BLAST
Ll_transcript_321496; 1 22 TAACGCTGCGCAACGATCGCTC BLAST
Ll_transcript_321495; 1 22 TAACGCTGCGCAACGATCGCTC BLAST
Ll_transcript_354875; 95 118 GCCAACGCTGCGCAATGATCGCTT BLAST
Ll_transcript_389281; 125 148 GCCAACGCTGCGCAATGATCGCTT BLAST
Ll_transcript_389290; 125 148 GCCAACGCTGCGCAATGATCGCTT BLAST
Ll_transcript_438680; 188 211 GCCAACGCTGCACAACGATCGCTT BLAST
Ll_transcript_463856; 132 155 GCCAACGCTGCGCAACAATCGCTT BLAST
Ll_transcript_389267; 243 266 GTTAACGCTGCGTAACGATCGCTT BLAST

Expression of siRNA 309


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)