ta-siRNA 311 details

ID311
SequenceATTTTCGGAGACAGTCGGTTTTGG 

Targets of siRNA 311

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_77746; 117 140 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_77755; 147 170 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_200774; 94 117 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_200770; 94 117 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_200780; 94 117 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_77753; 147 170 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_162834; 85 108 CCGAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_132728; 194 217 CCGACACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_162814; 90 113 TCAAAACTGACTGTCTCCGAAAAT BLAST
Ll_transcript_58057; 3 26 CCAAACCCGACTGTCTCCGAAAAT BLAST
Ll_transcript_10535; 27 50 CCGAAACCGTCTGTCTCCGAAAAT BLAST
Ll_transcript_162841; 127 150 CCGAAACCGTCTGTCTCCGAAAAT BLAST
Ll_transcript_243074; 644 668 TCAGAAATCGACTGTCTCCGAAAAT BLAST
Ll_transcript_243080; 644 668 TCAGAAATCGACTGTCTCCGAAAAT BLAST
Ll_transcript_243089; 686 710 TCAGAAATCGACTGTCTCCGAAAAT BLAST
Ll_transcript_243077; 687 711 TCAGAAATCGACTGTCTCCGAAAAT BLAST
Ll_transcript_10529; 156 179 CCGTAACCAACTGTCTCCGAAAAT BLAST
Ll_transcript_162835; 440 463 CCGCAAACGACTGTCTCCGAAAAT BLAST
Ll_transcript_162832; 666 689 CCGCAAACGACTGTCTCCGAAAAT BLAST
Ll_transcript_162837; 868 891 CCGCAAACGACTGTCTCCGAAAAT BLAST
Ll_transcript_243069; 53 76 CCGAAACCGACTGTCTCCAAAAAT BLAST
Ll_transcript_243070; 53 76 CCGAAACCGACTGTCTCCAAAAAT BLAST
Ll_transcript_10533; 112 135 CCGAAATCGGCTGTCTCCGAAAAT BLAST
Ll_transcript_10513; 117 140 CCGAAATCGACTGTCTCTGAAAAT BLAST
Ll_transcript_162836; 85 108 CCGAAATCGACTGTCTGCGAAAAT BLAST
Ll_transcript_14774; 181 204 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_14777; 181 204 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_278837; 50 73 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_463472; 86 109 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_463469; 184 207 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_518773; 31 54 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_370486; 1209 1232 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_518760; 31 54 CCAAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_463471; 52 75 CCGAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_476074; 3 26 CCGAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_476094; 3 26 CCGAAACCGACTGTCTCCGAAAAT BLAST
Ll_transcript_515970; 116 139 TCAAAACTGACTGTCTCCGAAAAT BLAST
Ll_transcript_353339; 234 257 TCAAAACCGTCTGTCTCCGAAAAT BLAST
Ll_transcript_463470; 183 207 TCAGAAATCGACTGTCTCCGAAAAT BLAST
Ll_transcript_463514; 95 118 CCAAAACCGACTGTCTCCGAAGAT BLAST
Ll_transcript_353337; 14 37 CTGAAACCGACTGTCTTCGAAAAT BLAST
Ll_transcript_370485; 1209 1232 CCGAAACCGACTGTCTCCAAAAAT BLAST
Ll_transcript_441248; 133 156 TCAAAACCGACTGTCTCCAAAAAT BLAST
Ll_transcript_441260; 193 216 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_441269; 135 158 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_441276; 189 212 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_441263; 189 212 CCAGAACCAACTGTCTTCGAAAAT BLAST
Ll_transcript_510187; 68 91 CCGTAACCAACTATCTCCGAAAAT BLAST
Ll_transcript_422236; 183 208 TCAAAACCAAGTCTGTCTCCGAAAAG BLAST

Expression of siRNA 311


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)