ta-siRNA 41 details

ID41
SequenceAATACTAGAGAGGAGTTGGGCTCT 

Targets of siRNA 41

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_227385; 108 131 AGAGCCCAACTCCTCTCTAGTATT BLAST
Ll_transcript_133159; 3 26 GGAATCAAAATCCTCTCTAGTATT BLAST
Ll_transcript_247176; 1230 1253 AGAGTTCAACTCCTCTCTAGTAAT BLAST
Ll_transcript_247188; 1130 1153 TGAGTTCAACTCCTCTCTAGTAAT BLAST
Ll_transcript_247190; 2078 2101 TGAGTTCAACTCCTCTCTAGTAAT BLAST
Ll_transcript_93175; 65 88 GGAGCACAACTCCTCTCTAGTACT BLAST
Ll_transcript_18530; 200 223 TGAGCCCATCTCCTCTCCAGTATT BLAST
Ll_transcript_461343; 1167 1190 AGAGCCCAACTCCTCTCTAGTATT BLAST
Ll_transcript_461338; 1743 1766 AGAGCCCAACTCCTCTCTAGTATT BLAST
Ll_transcript_480598; 207 230 AGAGTTCAACTCCTCTCTAGTAAT BLAST
Ll_transcript_407520; 72 95 GGAGCACAACTCCTCTCTAGTACT BLAST
Ll_transcript_487675; 118 141 TGAGCCCATCTCCTCTCCAGTATT BLAST
Ll_transcript_407993; 162 185 AGGGCCCAACTCTTCTTGATGCTC BLAST

Expression of siRNA 41


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)