ta-siRNA 47 details

ID47
SequenceTCGGATCTAGAGCTACCAGTCTGT 

Targets of siRNA 47

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_110377; 202 225 ACAGACTGATAGCTCTAGATCCGA BLAST
Ll_transcript_36258; 181 204 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_36244; 181 204 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_36251; 181 204 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_36239; 181 204 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_36252; 244 267 ACAGACTGGTAGCTCTAGATCCAA BLAST
Ll_transcript_50659; 174 197 ACGGACCGGTAGCTCCAGATCCGA BLAST
Ll_transcript_50663; 322 345 ACGGACCGGTAGCTCCAGATCCGA BLAST
Ll_transcript_435789; 507 530 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_435779; 518 541 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_435783; 633 656 ACCGACTTGTAGCTCTAGATCCGA BLAST
Ll_transcript_104928; 592 620 GCAGACTGGTTGGCTTTCATCAGATCCTA BLAST
Ll_transcript_388705; 290 318 GCAGACTGGTTGGCTTTCATCAGATCCTA BLAST

Expression of siRNA 47


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)