ta-siRNA 53 details

ID53
SequenceTGCAACTGGACTATTCTTGAAACC 

Targets of siRNA 53

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_5087; 148 171 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_77546; 151 174 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_5082; 146 169 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_5089; 146 169 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_5088; 858 881 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_5081; 3354 3377 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_172576; 100 123 GGTTTCAAGAATATTCCAGTTGCA BLAST
Ll_transcript_169135; 75 98 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_169119; 133 156 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_273224; 85 109 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_273227; 39 63 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_273230; 85 109 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_273235; 39 63 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_259872; 294 318 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_137571; 1503 1527 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_278194; 67 90 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_494260; 759 782 GGTTTCAAGAATAGTCCAGTTGCA BLAST
Ll_transcript_491196; 29 52 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_468013; 193 216 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_491192; 2 25 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_491201; 29 52 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_493595; 56 79 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_453808; 108 131 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_468012; 321 344 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_493591; 56 79 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_468002; 567 590 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_353410; 1138 1161 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_468010; 1519 1542 GGTTTCAAGAATAGTCCAGTTACA BLAST
Ll_transcript_417704; 2738 2761 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_417711; 2769 2792 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_417697; 3833 3856 GGTTTCAAGAATAGTCCAATTGCA BLAST
Ll_transcript_493577; 151 175 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_529679; 40 64 GGTTTCAAGAATAGTCCAGTTTGCA BLAST
Ll_transcript_529680; 40 64 GGTTTCAAGAATAGTCCAGTTTGCA BLAST

Expression of siRNA 53


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)