ta-siRNA 54 details

ID54
SequenceAACGGCCGTAATCTGTATCCCAAC 

Targets of siRNA 54

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_235382; 858 881 GTTGGGATACAGATTACGGCCGTT BLAST
Ll_transcript_235392; 858 881 GTTGGGATACAGATTACGGCCGTT BLAST
Ll_transcript_182085; 523 546 GTTGCGATGCAGATTACGGCCGTT BLAST
Ll_transcript_182086; 523 546 GTTGCGATGCAGATTACGGCCGTT BLAST
Ll_transcript_166913; 511 534 ATTGCGATGCAGATTACGGCCGTT BLAST
Ll_transcript_223193; 2008 2031 GTTGCGATACAGATTGCGGCCGTT BLAST
Ll_transcript_108497; 443 466 ATTGTGATACAAATTACGGCCGTT BLAST
Ll_transcript_108493; 1132 1155 ATTGTGATACAAATTACGGCCGTT BLAST
Ll_transcript_108496; 1182 1205 ATTGTGATACAAATTACGGCCGTT BLAST
Ll_transcript_235354; 230 253 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_235353; 320 343 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_54957; 417 440 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_218216; 72 95 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_254733; 86 109 GTTGGGATACGGATTGCGGCCGTT BLAST
Ll_transcript_42594; 60 83 GTTGTGATACGGATTATGGCCGTT BLAST
Ll_transcript_42594; 123 146 GTTGTGATGCAGATTATGGCCGTT BLAST
Ll_transcript_4158; 165 188 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_90365; 207 230 ATTGTGATGCAGATTGCGGCCGTT BLAST
Ll_transcript_206977; 627 650 ATTGGGATACCCATTACGGCCGTT BLAST
Ll_transcript_89877; 152 178 GTCACTGTGATACGGATTGCGGCCGTT BLAST
Ll_transcript_29457; 179 202 GTTACGATGCAGATTGCGGCCGTT BLAST
Ll_transcript_89879; 152 178 GTCACTGTGATACGGATTGCGGCCGTT BLAST
Ll_transcript_70182; 197 220 TTTGTGATGTGGATTACGGCCGTT BLAST
Ll_transcript_284253; 7 30 GTTGGGATACAGATTACGGCCGTT BLAST
Ll_transcript_422722; 858 881 GTTGGGATACAGATTACGGCCGTT BLAST
Ll_transcript_466944; 1091 1114 GTTGCGATGCAGATTACGGCCGTT BLAST
Ll_transcript_437823; 87 110 GTTGCGATACAGATTGCGGCCGTT BLAST
Ll_transcript_490845; 1112 1135 ATTGTGATACAAATTACGGCCGTT BLAST
Ll_transcript_299785; 826 849 GTTGTGATGCGGATTACGGCCGTT BLAST
Ll_transcript_477074; 643 666 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_512900; 558 581 ATTGCGATGCGGATTACGGCCGTT BLAST
Ll_transcript_311833; 5 28 GTTGGGATACGGATTGCGGCCGTT BLAST
Ll_transcript_309378; 138 161 GTTGTGATACGGATTGCGGCCGTT BLAST
Ll_transcript_372960; 1 24 GTTGTGATACGGATTGCGGCCGTT BLAST
Ll_transcript_417875; 34 57 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_283041; 307 330 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_283045; 1471 1494 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_283040; 1471 1494 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_283042; 1501 1524 GTTGCGATACGGATTATGGCCGTT BLAST
Ll_transcript_473272; 1312 1335 ATTGTGATGCAGATTGCGGCCGTT BLAST
Ll_transcript_470495; 534 557 ATTGGGATACCCATTACGGCCGTT BLAST
Ll_transcript_470496; 631 654 ATTGGGATACCCATTACGGCCGTT BLAST
Ll_transcript_477056; 139 162 GTTACGATGCAGATTGCGGCCGTT BLAST
Ll_transcript_435389; 1345 1371 GTCACTGTGATACGGATTGCGGCCGTT BLAST
Ll_transcript_319671; 533 556 ATTATGACGCGGATTACGGCCGTT BLAST
Ll_transcript_319672; 642 665 ATTATGACGCGGATTACGGCCGTT BLAST
Ll_transcript_235382; 858 881 GTTGGGATACAGATTACGGCCGTT BLAST
Ll_transcript_284253; 7 30 GTTGGGATACAGATTACGGCCGTT BLAST

Expression of siRNA 54


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)