ta-siRNA 78 details

ID78
SequenceCCGTTTTGTCGTCCTTCTGCCGTG 

Targets of siRNA 78

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_33135; 202 225 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_238109; 35 58 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_33112; 148 171 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_34644; 127 150 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_34634; 255 278 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_114496; 35 58 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_33129; 1690 1713 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_250028; 78 101 CATGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_34893; 13 36 CACGTCAGAAGGACGACAAAACGG BLAST
Ll_transcript_33138; 98 121 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_33116; 231 254 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_33117; 308 331 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_33120; 1898 1921 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_33118; 1915 1938 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_238086; 35 58 CACGGCAGAAGGACGACAAAACGA BLAST
Ll_transcript_250028; 38 61 CACGACAGAAGGATGACAAAACGG BLAST
Ll_transcript_238084; 34 57 CACGGCAGAAGGACGACAAAATGG BLAST
Ll_transcript_33113; 213 236 CACGGCAGAAGGACGACAAAATGG BLAST
Ll_transcript_33115; 231 254 CACGGCAGAAGGACGACAAAATGG BLAST
Ll_transcript_163770; 23 46 CACGGCAGAAGGACAACAAAACGG BLAST
Ll_transcript_33134; 106 129 CACGGCAGAAGGACAACAAAACGG BLAST
Ll_transcript_163772; 254 277 CACGACAAAGGGACGACAAAACGG BLAST
Ll_transcript_75956; 257 280 CACGACAAAAGGACGACAAAACGA BLAST
Ll_transcript_163809; 45 68 TACGACAAAAGGACGACAAAACGA BLAST
Ll_transcript_33114; 1919 1944 CCTGGCACAGAAGGACGACAAAACGG BLAST
Ll_transcript_238099; 137 160 TACGGCAGAATGACGACAAAACTG BLAST
Ll_transcript_75953; 257 280 CACGACAGAAGAACGACAAAACGA BLAST
Ll_transcript_75952; 257 280 CACGACAGAAGAACGACAAAACGA BLAST
Ll_transcript_142112; 594 617 CACGGCCGAAAGACGACAAAACGA BLAST
Ll_transcript_142114; 772 795 CACGGCCGAAAGACGACAAAACGA BLAST
Ll_transcript_304312; 115 138 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_500706; 158 181 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_500707; 158 181 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_304311; 115 138 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_500709; 22 45 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_500710; 233 256 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_500714; 233 256 CACGGCAGAAGGACGACAAAACGG BLAST
Ll_transcript_531579; 20 43 CACGTCAGAAGGACGACAAAACGG BLAST
Ll_transcript_531575; 20 43 CACGTCAGAAGGACGACAAAACGG BLAST
Ll_transcript_442627; 24 47 CACGGTAGAAGGACGACAAAACGG BLAST
Ll_transcript_480784; 608 631 CACGGCAGAAGGACGACAAAACGA BLAST
Ll_transcript_373054; 626 649 CACGGCAGAAGGACGACAAAACGA BLAST
Ll_transcript_521860; 468 491 TACGACAGAAGGACGACAAAACGA BLAST
Ll_transcript_331311; 157 180 CACGACAAAAGGACGACAAAACGG BLAST
Ll_transcript_331327; 595 618 CACGACAAAAGGACGACAAAACGG BLAST
Ll_transcript_331325; 1034 1057 CACGACAAAAGGACGACAAAACGG BLAST
Ll_transcript_500715; 142 165 CACGGCAGAAGGACGACAAAATGG BLAST
Ll_transcript_500711; 142 165 CACGGCAGAAGGACAACAAAACGG BLAST
Ll_transcript_500703; 220 243 CACGACAGAAGGACGAAAAAACGG BLAST
Ll_transcript_500703; 260 283 CACGACAGAAGGACGAAAAAACGG BLAST
Ll_transcript_500704; 220 243 CACGACAGAAGGACGAAAAAACGG BLAST
Ll_transcript_285933; 53 76 CACGACAAAGGGACGACAAAACGG BLAST
Ll_transcript_285919; 231 254 CACGACAAAGGGACGACAAAACGG BLAST
Ll_transcript_285925; 255 278 CACGACAAAGGGACGACAAAACGG BLAST
Ll_transcript_285934; 53 76 CACGACAAAGGGACGACAAAACGG BLAST
Ll_transcript_277316; 39 62 CACGGCAGAAGGACGACAAAATGC BLAST
Ll_transcript_277315; 39 62 CACGGCAGAAGGACGACAAAATGC BLAST
Ll_transcript_531572; 349 372 TACGGCAGGAGGATGACAAAACGG BLAST
Ll_transcript_531563; 1210 1233 TACGGCAGGAGGATGACAAAACGG BLAST
Ll_transcript_531582; 80 103 TACGGCAGAAGGACGACAAAATGA BLAST
Ll_transcript_531584; 80 103 TACGGCAGAAGGACGACAAAATGA BLAST
Ll_transcript_480785; 629 654 CCTGGCACAGAAGGACGACAAAACGG BLAST
Ll_transcript_531578; 80 103 TACGGCAGAATGACGACAAAACTG BLAST
Ll_transcript_480788; 90 113 CACGACAGAAGAACGACAAAACGA BLAST
Ll_transcript_480793; 90 113 CACGACAGAAGAACGACAAAACGA BLAST
Ll_transcript_96897; 341 365 CACGGCAGATGGACGACGACGACGA BLAST
Ll_transcript_389963; 513 537 CACGGCAGATGGACGACGACGACGA BLAST

Expression of siRNA 78


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)