Ll_transcript_239776

• Id Trinity: FTRINITY_DN20613_c0_g1_i2
• Name Transcript: Ll_transcript_239776
• Sequence: CAACAACCTATTAACAACTAATATAAAAACTCATCTTCAATTAATACACAAATTATGAATTTTAACAAAATTATGATCTTGGAGTAAGAACATTATTATG AGTGATTGTAAATCTAAAATCACCAAACCCTAACTTCAAAAATCTCACCGAACCAGAGACAAGATATGGCGAAGAAACGAAAGCTGCCACCAATTTCTAC TCCATCGGAACAACCACCGCTCAAGCAAAATCATGAACAACAACCTCAACTTGATTCAGATGAAGAGTACGAAGAAATCGAAGTCGAAGAAGAAGTAGAA GAATTAGAACAACAACAAGAAGATGATGAAGATGATCAAAACGACGTCGTTCAGTATAAATATGATAGTAATAATCAGACGGTCAATTTGCCCTCCACGT CATCAACGCTCGCTGACGATGACGATGATCCAATCCAGAACCTTCTAGAACATTTCGGAAAGGACCAACTCTCGACACTTCTCTGCGCCGCCGCCGCCAA CCACCGCGACGTGGCGGACCGTATCCGTAACACGGCCAACGCGGATCCTTCTCACCGGAAGATCTTCGTCCACGGTCTTGGCTGGGATACTACAGCCGAA ACCCTAATCTCGGCGTTCCGGCAATACGGCGAGATTGAAGACTGCAAAGCCGTGGCTGACAAGATCACCGGAAAGTCCAAGGGCTATGGGTTCATCCTTT TCAAGACCCGCTCCGGTGCCCGAAAAGCGCTGGAGCAGCCACAGAAGAAGATTGGGAATCGAATTACTTCGTGCCAGCTGGCATCCCTTGGTCCTGTTCA GCAGCAGCCGAATAATGTGGCGCAGGCGAGTTTTAATAATACTCCTGCGCCAAGTAAATCGGCTGCATTTGTGCTACCAGTGGGGTCAGAATACACGCAG AGGAAGATTTTTGTGAGTAATGTGGGGGCTGAATTGGATCCCCAGAGGCTGCTTGCGTTTTTCTCGAAATTCGGTGAGATAGAGGAAGGACCCTTGGGGC TTGATAAAGTGACTGGGAAACCGAAGGGGTTTTGCTTGTTTGTGTATAAGAGAATTGAGGGTGCGAGGAAGGCGTTGGAGGAACCACATAAGGCGTTTGA AGGCCATGTTTTGCATTGCCAGCAAGCCATTGATGGTCCCAAACCAGGGAAGTTACAACAGCAACAAGCTCAGACTCAGAGGGTGCCGATTGCGGTGGGA GCACCAGCGACGACAACACCAATGCAGTTTCAGAGAAGTGGTAATCCTGGCTTTGTCAGTAGTGCGTTGGCAGCCACACCAGGGCACTTGATGGCACCGT CTGGACCTGTGATTGGATTTAATCAAGGAGCTACTGCGGTGCCTATGCAGACAATGGATCCGGCTCTCGGGCAGGCATTGACAGCGCTGCTCACATCTCA TGGCGCTGCTGGCTTGGGGCTGAATGGTTTGTTGGGAACACTAGGATCATCGGCAGCAGTAAACCCTGGGGTCCCATCTCTGGGTCACGGAATGCATGTT GGTTATAATAGTCAGGCAAATGTGAATCCCGGGACTATTGGAGGATATGGGAATCAAGTTGGATTTCAGGGTGCATATCCAAACCAGCAGGTGGGACAAG GTGGCTCTGCAAGAGGACAGCAGCAGCAGCAGCAGCGTGGTGTTGGGCAATATGGCAGTGTTGCCCCTTTCACGGGGCACTAGATCCCACATAAGTATAC CAGTCTTTTATTATTGGCCTGGTGATTCTTCTGAAGTTTAGGGAGCTGATGCGATTGGGGTCTTTATAATGAAATGTTACTTCAAAGATCAGAATATTTA TATCTCTAAATGAAGTTCATTTTCGCACCTACGTTTTTTAATTTTTATCTCCCTTTTAAAAAATACTGTTGTATTTGGCTTTTACTTTATTTTCAAAAAT CCTTCAGAATTGATTTGATAATTTAGTTTGTACTATAACGAGTTTGAGATGCAGAACAAAAGATATTATGAACTTTATGTTTGTGTGGTCCATGGTTCAA CTTGATATTCAAGGTTTATTTTACTGTTTAACACCCTCATTTCTTATGTACTTGAATTTTGTTTCTTCTTGAACGTGATTATCCAAATGAAATTTGTGTT GTATGCCCA
• Tissue: flowers
• Gene name: LI_gene_2560;
• Additional information: details;

Expression of Ll_transcript_239776

FPKM

• FPAB: 18.4
• FPNAB: 22.1
• LF1: 15.3
• LF2: 17.7
• LF3: 17.8
• LF4: 19.5
• UF1: 13.7
• UF2: 14
• UF3: 18.5
• UF4: 19.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_239776

• Blastp: UBP1-associated protein 2A from Arabidopsis with 56.63% of identity
• Blastx: UBP1-associated protein 2A from Arabidopsis with 56.02% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT3G56860)
• CantataDB: Link to cantataDB annotations (CNT0001580)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442852.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;