Ll_transcript_169953

• Id Trinity: FTRINITY_DN378_c0_g1_i1
• Name Transcript: Ll_transcript_169953
• Sequence: GGGGCAAGAACGAACTCATTGTCCTCATTCCTCCAACAACACCACACCATATCCATCAACACAAGAGGAGAGGACAATTCCGCCGCCACAACCACCACCT TCCCTTCTCTTTGCATATCCCAATTCCTCCCATAAATCCAAACACCATCCAACCCAAAAATCCATTTTTCTTTAAAAAGTCAAAACACACGTGATATCAT ATCATATCATAATCATATATATACCCAATTGTGCAAATTGAGTTTTTGTTCCATTTGATCTTCAATAATTATGATGATTATTTGGAACATCATATTCCTC ATAATCCTTATCATCTTTGTCATATTCTTCTTTCGTGTGTTCCTCTTTAAAACAGGATTGATACACACTTTTAACAAATTCATCACAACAATCCAAGACA GCTTTCAAGTTTACCAGTACCTCAAAGTCCCCGAATTCAATGAAAACATGCAATATAACCTCCTTTACGGTAAACTCTCCCTCTATTTAAATTCCCTCCC TTCTATTGAAGATTCTGATTGCATCAACCTCGTTACTGGTACCAACCAAAACGACATCGTTCTCTCCCTCCACGCAAATCAAACCATCCACGACTCTTTT CTCGGAGCTAGGTTATTCTGGCTCAGTCAACAAAACGAATTGGACCGGACCGGTTCGTTTCTTCTCAAAATCAGAAAAGCCGATAAACGCCGTGTTCTCC GCCCTTATTTCAACCACATCCACGCCATCGTCGACGAGATAGAGAATCAACGAAAACGCGAATTGCGGCTATTCATCACTGCCGGCGATTCCGCTGGGAA GTCACGGTGGCGATCAACTCCGTTCACGCATCCTTCCACGTTTGAGACTATAGCAATGGAATCTGATCTCAAGGACAAGATTAAATCGGACCTTGAATCG TTCCTCAAGGCGAAGCAATACTACAGGAGAATTGGCCGTGTCTGGAAACGGAGCTTCTTATTGTACGGTCCCTCCGGTACTGGAAAATCAAGCTTCGTTG CTGCCATGGCGAATTTCCTTTCATACGACGTGTACGACGTGGATCTCTCAAAAGTTAAAGGCGATTCAGATCTGAAGTTTCTCTTCGTCGAAACGACGCC GAAGTCAATCATCGTGGTGGAAGACTTAGACCGGTTCATTGAGGAGAAATCAAAATTGACGTCGTCGTTTAGCGTATCAGGGATTCAGAACTTCATGGAT GGAATTTTAAGCACATGTTGCGGAGAAGAGAGAGTGATGGTGTTTACGATGAGTAACAAAGAACAAATTGACCCGATTCTGCTTCGTCCGGGTCGGGTCG ACGTTCATATTCATTTTCCGGTGTGTGATTTCTCAGCGTTTAAATCGCTAGCGATTAATTACCTCGGTATAAAAGAACATAAGCTGTTCCCTCAGGTGGA AGAGATTTTCCGGCAAGGGTCGAGTCTGAGTCACTCGGAAATCGGTGAGTTGATGATCGCGAATCGGGACTCGCCAACTCGGGCCATCAGATCGGTTATC GGGGCACTGAAAACGGACGGTGATGGGAGGGGGTCTGAGGAAAAGATCCAACGGCAAATACGGGATGATGACGTGGATTCAGCACCGGAAAGGTTCAATA CAGTTAAGGATTTGAGGAGAATATACAGTTTGTTTAGGAAGCGGAGTAGTAGAAGATCTCAAGCGTCCATTTCACCAATGCCATGATAGGTAATATAGTA ATAGGTGATATACATTATTCAGGAGGGGAAAGAGGTGATTTGTTCATAAACAAATTAGGGAATACATTCATTGCTTGGATACACCAATACAAGTGTTCAT ATTTGTTGGTTAGGAATGATTTGAATTGGGGGTTGCTACTTGCTAGTGGGAAATGTGTGCATATTTGTTGTATAGGAGTGATTTGAATTGGGATGTTTTT AGTGGGAATTCATTTATAGTTAGAATTAGAATCATGTGGAAAAAAGAATTTAACTGTAGTGTAAACTTTTTTATATGGTTTCAGATTCAACTAACAATGT TTAAGTGTTATAATATAAATATATTTCAAAAAGAATAAATTAACAATTGATTTGATT
• Tissue: flowers
• Gene name: LI_gene_8376;
• Additional information: details;

Expression of Ll_transcript_169953

FPKM

• FPAB: 13.8
• FPNAB: 3.1
• LF1: 6.7
• LF2: 10.1
• LF3: 10.5
• LF4: 9.7
• UF1: 5.8
• UF2: 12.2
• UF3: 11.7
• UF4: 9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_169953

• Blastp: AAA-ATPase At2g46620 from Arabidopsis with 57.41% of identity
• Blastx: AAA-ATPase At2g46620 from Arabidopsis with 58.95% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT2G46620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462426.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;