Id Trinity | FTRINITY_DN42010_c0_g1_i3 |
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Name Transcript | Ll_transcript_170086 |
Sequence | TGATCTTCTCTCAATTAAAGACGAGAAAGTTTTGTTTTCTCTTCAATCTTTTGTCAACCTTTTCTCTCCCCTCCAACTCTCCTCAATCTTAAAAAAAAAC ATTAAAAATATAATTCAATTAAAATTTATAAATAATAACACAAAAAAAACCAAAATTACACTTATCTCTAAGTCTTTAGGAGAGGGAGTACTAGAGAGGG AGTACTAGCACCAGTACTAAAACTCACTATCTAGCATTACTCAAATGTACTGCACTTCCATCCGACATTGATAAGTTAGGATAAGTTTCTTCAAACAAGA CTCTACACTTTGAAGCAGAAGCTGAAAGCTGAACTGAAAAAGCTTTTTTGAAGAGATGAAATCGCTTTTGCCATCCACTACTTCCCTTCTACCACCACCT TCTGCTTTTCTTCCTCACCAATCCCATGGCTTCTTACACATGGCTTCTCCTACTTCCTTCAATTTCTCAAACAAAGAGAGAAGAAGCTTGAGCGACGATG GACCTATTGAAACTGCTCCAAAGATTGAGCTTAAGCCACCTCCTTATCCTCTTAACGCTTTGGAGCCAATTATAAGTCAGAAGACACTTGAATATCATTG GGGGAAGCACCACAGGGCTTACGTAGATAACCTGAACAAGCAAATTGCTGGAACAGATCTCGAGGGGAAGTCGCTGGAGGAAATCATAGTTACTTCATAC AATAAGGGTGACATTCTTCCGGCTTTCAACAATGCAGCACAGGCGTGGAACCATGAATTCTATTGGGAGTCCATCAAACCCGGTGGTGGTGGGAAGCCAT CTGGGGATCTTCTAAAACAGATTGAACGAGACTTCGGTTCATTTGAAAAATTAATTGACGAGTTAAAGATTGCTGCCACTACACAATTTGGTTCCGGATG GGCGTGGCTTGCATATAAAGAGAACAGACTCGATGTGGGAAATGCAGTAAATCCTCTTGCATCTGAAGCGGATAAAAAGCTAGTCGTCGTGAAGAGTCCC AATGCCGTGAACCCTCTTGTCTGGGGCTATTATCCAATCCTTACCATTGATGTTTGGGAGCATGCTTACTACCTCGACTTTCAGAATCGTCGCCCGGATT ATATATCAAACTTCATCGAGAAACTTGTGTCCTGGGAAGCAGTCAGCTCAAGACTTGAGCAAGCTAAGGTTCTAATTGCTGAGAAGGAGAAAGAGGACGA GAGGAAAAAAAGAGAGGAGGAAGAGGAGTTGCTGACCGGCGGATCCAGGTCACAAACTTATCGTTATAGTGATGCCGAGGGGATTATCGAATGAATGAAC CACATCCTTTGCATCAGCTAGGTGTGGTACAAGAGGGTTCATTCCTTCTAAGTTGCAAACTTTGTTCTATGATCAACAATGTTAATTATCGCTTCATTCA CATGACTTAATTATGTATTTTGGATTATCATAAAATAATTGTGGAATTCTGATTTTATTTCTGTGTTGTTTTATGACTATACAACTTATGATTTATACAC ACTATGAGATTAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_10089; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170086
Blastp | Superoxide dismutase [Fe] 2, chloroplastic from Arabidopsis with 69.4% of identity |
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Blastx | Superoxide dismutase [Fe], chloroplastic from Soja with 74.57% of identity |
Eggnog | Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)(COG0605) |
Kegg | Link to kegg annotations (AT5G51100) |
CantataDB | Link to cantataDB annotations (CNT0001139) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435587.1) |
Pfam | Iron/manganese superoxide dismutases, alpha-hairpin domain (PF00081.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |