Id Trinity | FTRINITY_DN44376_c0_g1_i1 |
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Name Transcript | Ll_transcript_96837 |
Sequence | AAAAAAGAAGGATGCCCTCAACCACTCTTTTCAGCATACCACCCCTCTCCTCTGCCAACCACCGTTCACCACCGTCAACACGGTGGTCCACCACCCATCT CCCTCCGCCGGATAAGCTTGCCCTCTTAATAGACAACTCCAAATCCATTAACCACCTTCTCCAAATCCACGCCACCCTTCTCCGCCGTGACCTACACCAC CACCCTATCCTGAACTTCAAGCTCCAACGCTCTTACTCCTCCTTCAACCACCTTCATTACTCTGTCACCCTTTTCAACCAAACCCATAACCCCAATGTCT TCTTATGGACCTCAATTATCCAAAGTCACAATCTTTATGGTCTTTCACACCAAGCCTTGGCTTATTATACTCAAATGCTTGTACATGGTGTTGAACCCAA TGCTTTTACCCTTTCCTCTGTTATCAAAGGTTGCCCCTTTGAAACCATCAGAGCCATTCATGGCCATGTTGTGAAATTCGGGTTGGGTTCGGATTTGTAT GTTAGTACAGGAATTGTTGATGGGTATGCTAGGGGGGGTGATGTTGAGTCTGCGGAGAAGGTGTTTGATAAAATGTCTGAGAGGAGTTTGATTTCTTTGA CGGCTATGCTTACGTGTTATGCGAAGCATGGGAAGCTTCGGGAGGGTCGGGTTTTGTTTGAGGAGATGGAGGGTGATCGGGATGTGGTGTGTTGGAATGT GATGATTGATGGGTATGCTCAACATGGGTTTCCGAATGAGTCGTTGTCGTTGTTTAGGAAAATGTTGAGAGAAAGAGTTAAGCCGAATGAGATAACTGTT TTGTCTGTGTTATCTTCTTGTGGGCAGCTTGGTGCTCTTGAGTGTGGTAGGTGGGCTCATTCTTACATTGACAACAATGGTGTTCGTATCAATGTTCGTG TTGGTACCGCTTTGGTTGACATGTACTGCAAATGTGGTAGCTTGGACGATGCGCAAGAGGTTTTCGATAGGATTGAGGGTAGGGATGTGGTGGCTTGGAA TTCAATGATTATGGGATACGCCATTCATGGATTTAGTGAAGAAGCTTTGAAACTGTTTCATGAGATGTGTAGCGCCGGAATCAAACCAACTGATATTACC TTTATCGCTGTTTTGACTGCTTGTGGGCATTCTGGTTTAGTCACCGAAGGATGGGGAATTTTCAATTCGATGAAGGATGATTATAACTTGGAACCAAAGA TTGAGCACTATGGATGTATGATGAATCTTCTTGGCCGTGCCGGGAATCTTCAAGAAGCTCATGACCTTGTCAAGAACATGAAGATAGATCCTGATCCTGT CCTATGGGGAACTTTACTTTGGGCATGCAGACTTCATAACAATGTTTCTCTTGGAGTAGAAATAGCAGAGTTCATTCTGAGTAATAACTTGGCTACTTCA GGGACTTATGTTATTATTTCTAACATATATGCTGCTGCTGGTAACTGGGTTGGTGTGGCTAAGGTGAGATCATTGATGAAAGACAGTGGAGTCGAAAAGG AACCGGGTTGTAGCTTAATTGAAGTTAACAACAAGGTGCATGAGTTTCTTGCTGGTGATTTACGACACCGAAAGAGCAGAGATATATATTTGATGCTGGA AGAGATAAGCAATTGGCTTAAGGCCAATGGCTATACACCAAAGACAGATATTGTTTTACATGATTTAGAGGAACAACAGAAGGAGCAGTCATTGGAAGTT CACAGTGAGAAACTTGCCTTGGCATTTGGTCTCATCAGTACTCGACCGGGAACTACAATCAAGATCGTAAAGAACCTTCGTGTTTGTTTGGATTGTCATT CTGTGATGAAGATGATATCTAAGATTACCGGACGTAAAATCATAATGAGAGACCGGAATCGGTTCCACCACTTCGAGAATGGTTCATGTTCATGTGGAGA GTACTGGTGAACCTAATCATATGTAAAATGAAATTGAGAGAAGTACTGAAGTTGTTGCTGACAACTTCATTGGAGATGAAGTTATCCTATTAAGAAAGCA TAGCAGCTAAAAATTCATGAGATTAAATTGAAGAATGAACTACTCTTGTATATCAAGAAATTGGACAGTAATTCACTTCCTTTGTTTCAATGTTTAAAAT CCCCAAATATATAATAGCCCTATAACTTTTAACAAACATGATAATATTTTATAACTTTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_12398; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_96837
Blastp | Pentatricopeptide repeat-containing protein ELI1, chloroplastic from Arabidopsis with 56.89% of identity |
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Blastx | Pentatricopeptide repeat-containing protein ELI1, chloroplastic from Arabidopsis with 56.89% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT4G37380) |
CantataDB | Link to cantataDB annotations (CNT0001395) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420233.1) |
Pfam | PPR repeat family (PF13041.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |