| Id Trinity | FTRINITY_DN48482_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_97626 |
| Sequence | TACTGGCCCATCAAACCAATACCCTCTTTCAATAACAAAACAGCGCTCACCTCTTCACTCTCTCATTGCTATACCATCCCACCACCGTTCGCGGCGGCTC CCACCGATTCCGGCAACCATATTCGAATTTGTGACACTTTCTCAGTTGAAGTCTAGCAAAATCATATAATGCCCCGAAGGCCAAGAATTCATCGCCAACG ACTCAAAACTTTGCCAATTGGATTCTCCCCTTTTGCACGTGCTCTTGCTCGTATGGACTCTAGTTCAACAGCGAAGTATCAAGCACGGGACTCAGAATTC ATTGAAAAGCCTAACCCTAGCTCTGCTGGTGATGGATTTGCAGAGCAGCCTTCGGATGACGAAGCAGAACAGTCTGCTTCATCATCAGATGAGCAGTTTG ATGGAGTTGTTCAAGCAGATTTTTCCTTTTTCGACCCTAAACCTGCTGATTTTCATGGAGTGAAGACCTTGCTGCAAACTTACTTGGATGATAAAGAATG GGATTTGAGTGGCTTTGTAGATTTGATTTTGGAGCAGACCACAGTAGGAACTGTTGTTAAGATAGAGGATGATGAGGATGAAGGACTTTTTGCTTGTGTT AGTGCTCTTAATTTATGGAGATATAGGGAGCAAAAATGCATTATGGAAGTCAAGGACTACCTCCGTAAAGCGTGCAAGGAAAAGGGTGTTGCTGACAAAT TGAGATTGCTTTTGGAGGAACAAGCACGTAATGTTGGTCTGTTGGTGTCACAGCGTGTAGTGAACCTTCCTCCCCAGCTTTTACCACCTCTTTATGATGG TCTCTTTGATGAAGTGTCATGGGCCACAGAAGATGAGCCAACAGAGGACCTCCGGAAGTCCTTCCAGTTCAAGCATTATATAATACTTAGCAAAATTTAC AAACACAAGAATGCAGAACAGAAAAGAAAACTGAGTGATGATAGTGAGGAGGAAATGATATATATAAAGCCAGAGGACGAAATTTTTCACAAGTTAAGCT CGTGGTCCTTCATTTTTCCATTGCAACCTCAGCAGCCTGCACCTCATGAGGCAAGTTTTATGATTCTTGAATCTCAGTTAACATTATCGTGATGTTATTT AGACTTGCTGAAAGTTATTGGTTTTGGTCATTTTCTTAAAATACAGTGCTAAAGTGCCACCTCTGTTTCTAGGCAAAATACAGACTAAACTAGTCAAATA CCTGTGCACTACACGGATTCGATCTTAATCTGTTCTAAACCTTAATTCAGTTCTCACAATAATCTCACCCATCACCAGTTTGGTCTTCATCATTCACATA TCTAGATCATAATTCATAGCCATTTAATTCTCACTCATCTTATTATATTATGGCTGGTAAACAAAATAATGATTCAGTTCCATACTTTATTGAATGGAAT TATCATTTTCATGTTTGTCAGCATAAAATAAACTTACAGAAATTGTGGCATGCCTCAATCCATAGAATCAGAAGTCACTATCCATTATAGGAGTGGTTAG ATTGTGGATTCCATACTCCATGTATAATAAGATTGACTTTTTCCCCAATCATAACCTTATTTATTTTCAAATATACTCATGTATTAAATTATTTTCAAAT ATTGATGTAAAATTAAAGATTAAAAACACTTCAAAAAGGTAGAAATGAGGGCTGAAACTGAAAGAAGATAAACATTGAGAAAGAGAAACTTAACAGTGAT GATGAAAAAAGGGTACACATATTTCAATGAAGATAGAGGAAATATTTAAAAATGAGGACAATTAATTAAAGATCCAATGGTATAAAATAAAGAATTAATG AATCCAAAGCAAGAAAAATGAGGAGGGATTTATTATATCAAGATGGCCAATGATCAATACAGAATACAAGCCAAAAAGACTGAAGTCCATTTATTTGTTA CATTATTAACCTATCATGTTGTAGAAATGGTTTGTAATATCTTTTTTGTCCATTTATATGTTTATGTTTCTGCTTACTACAGCTGAAGAATTACAAGCCA ATGGGATTAGTTTTGGCTGTTGAGGCAGACAAAATTCCAACTTTCCGTCAAGAATTGGTTACTTTAATAAGTGAAACCTGAAAACAACCACAAGATTCCT GCATAATTTATCACGTGATAGAGTCTTTAATAGTAATACTTTTCTGAATCTTCCCAAGTTTTTAAACCCCATCTTTCAGGTGTTTGAAATACCAATTTTT GATAGTTATTTTTATTTATACTCTTATGGTCCCTTTTGTTCTGCAATGACTATTGATACTTCAGTTGCTTTTAGGCTGTGGTTAGTTTCTACATTGCATT GATTATGAATGCCACCCTTTTCAATCATCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_17135; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_97626
| Blastp | Protein BCCIP homolog from Arabidopsis with 57.1% of identity |
|---|---|
| Blastx | Protein BCCIP homolog from Arabidopsis with 56.9% of identity |
| Eggnog | Involved in nuclear export, actin cytoskeleton organization and vesicular transport (By similarity)(ENOG4111GYV) |
| Kegg | Link to kegg annotations (AT2G44510) |
| CantataDB | Link to cantataDB annotations (CNT0000597) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462559.1) |
| Pfam | p21-C-terminal region-binding protein (PF13862.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |