Id Trinity | FTRINITY_DN49238_c0_g1_i2 |
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Name Transcript | Ll_transcript_209299 |
Sequence | AAAATACAGTAATAATCCCCTCACCATTTTCTAATTCCAACCCTTATAGCTTTCACTTCTCTTTCTCCTCCACCTCTTCCAAAACCCAAACCCAAACAAA ACCTCACTCTCTCTTCATCACTGCGATTCATACAAAAAATAAGACCAAAATGTTGTGCTTTCTTTTAAGAAGCGCAGCATCTAGCTCCAAAACCAAACCA TGGAAAACAAGCGTAACTGCAATTTCTTCTCTCAATTACTCTTCTAAGGTCCCTTTCAAACCCGATCCAAAAAAACCCACTTCTGTGACACCCTCCTCCT CCGCTCCTTCCGCCGCTGACACCCTCTTAGATGAACAAGAACGCTTGCGCCACCTTGCCGCCGATGAGAAGGACCCATCTCTTGATGTGGGACCCAATGG CCGCCCACTCTTCACTTCTGCCGCTTCCTTGTCCCAGTTCACTCGCCGCGATACCTGCTCCTATTTTAAGCTCACGAATGAAGCTTTGAAGACGGTGCTT CCTGAGGGATTGCCGACGGGGATGGTGAAGGAGTTTGAGGATTCCAAGCGAACTGCATTGCTTGTTCGACAGAGCTTCTTGGACCTTCGTGACAATTTCC GCCGTGTCGTTGATCCCACAATTGGGTCTTCTACTGGTAAAATATGCTGTTTTTATGTCGTTTTTAATGTGCCCCAGATGCTAGTTTTGTGTTGAATTGA TGCTGAGTTCGACTTTGGGTGTTTCACAATGCATTTCTCACAATTTTTTGAAAACCAAATTGCCTGGGTTTTGAGTTATGAATAGATTGGGTTAAGAGGA AATTACACTAACCTTCCTTGAGGTTTAGCTTAATTACCCTGGTTACCACTTTTGTTTCAAATGTTACACTCATCACATGTTTATGGATATAGGTCTATGT ATTTTCAGTATCACCCTTTAGGTCTTGGTAACTGTATCGATAGTTGATGTGTTGTTTCACATAAGAACAATGTTGGGTATAATTAATCTAAAGCATAAGG GAAGTCAGTGTGATTTCCCCTTGGTTTAACCAGCTAAATTGGAAGTTTAACTCGGGCTAAACAGTCTAACTGACTGGTCCGGTCCAGATTATCAAACATT GATTTGTTAGTCTAAATGTTATGTATGTGAGTTTTTTTCCTTATTCAGGGGTCAAAGTTAGAAAGCAAGTTGTGTTAGATGGTCCTGTTAGCTGTGGGAA GAGCATTGCACTTGCAATGCTTGTGCAATGGGCTAGAGAAGAAGGTTGGTTGGTTTTCTATGTTCACAGAGGCAAGGAATGGACTCAGGGAGGATTTTTC TACAAGCATCCGTTAACAGGTCTATGGGACACACCTGTCCAGGCTGAAAATGTGCTCAAGGATTTTTTGAAGTATAATGAGTCCTACTTGAAGCAACTGC CATGCCAAATACTTGATCCGATCCCACTGGGTGAGGGTGCTGGTGTTGGATGGTTGAAAGATGCTGATTCCTTGGCGATTTCTGAAGGTACAACGTTATA TGAGCTGGTGACGACTGGAATTGAACAAACACATGCAGCTGTTGCAGTGGTAGTTCGTTTGAGGAAAGAATTATCACTTGTTAAAGACATACCTGTACTT TTTGCAATTGATCAATACAATAACTGGTTTACATTCAGTGAGTATGAAGAGCCAGTTACAATTCGTTCTTGTCGGCCAATACATGCTAGAGAACTTGCAA TGGTGAATGCTTTTCGGCCAATGAAGCATGATGATATGATGGTAGGTGCCTTTTCTCATTCAACAGCTGTAGGAAAGCTTAGAAAAGACTTACCAGATGT TCCAGTAGATGCTCGCGTAACGTTTCCTCGATACACTTTAGATGAAGCTGAGACTGTTTCCCATTATTATTTAAGGCAAAGGCTTATCAATCGTGAAGTG TTCTCAGAAGAAAATTGGAAGAAAATATACTTTCTGTCCAATGGAAATGGAACAGAGATGAGGGGGTTACTTCCTTTCATGAGATGACAGACACTAGATG CACTATTTTTTCAAAGGACAATGTTCTATTACTGTTACCAATAATGTTATTGATGTTAACTGTTTCATTTTGAACTTTTCATCATAGGATACGGTGAGAT TACTATTTGCAATTTTGCATGATCTTAATTAACATGGAGAATTGTTGTTCAAGGCATTGTACGTACCACTATGTATATTAATTTGCAGCTTGTAGTTTTA GAATTGGTATTAATTTTCATTTGAGTTGTGAGTACCATCATTTTTCTTATATTTTTTTCGGGAAAATGATATTCTTATTTTTTTTTGTACTACGTAATGT ATCCTCTCAACCTTTTGGTAAAAATTAATCATTT BLAST |
Tissue | flowers |
Gene name | LI_gene_18234; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_209299
Blastp | 28S ribosomal protein S29, mitochondrial from Homo with 25.6% of identity |
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Blastx | 28S ribosomal protein S29, mitochondrial from Homo with 24.92% of identity |
Eggnog | Death associated protein 3(ENOG410XSDC) |
Kegg | Link to kegg annotations (7818) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419787.1) |
Pfam | Mitochondrial ribosomal death-associated protein 3 (PF10236.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |