| Id Trinity | FTRINITY_DN50116_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_3639 |
| Sequence | CTTTTCAAAGCTTCCTTACTCTCTTCTCTCTCTCTCACACACACAGAGATTCAATTAGGGTTTTCTGTATTCTTGATTCTTCCACTGCAATTCAATCATG AACATCTTCAGGAAGAAAACATCACCAAAAGAGGCTTTGAGGACAAGCAAGAGAGAAATGTCTGTTGCAACAAGAGGTGAATTACTTAAATTATTGCTTA TTTGGAAGTTATACTTGTGAATATATTTGGCTGCATAAATTGAATTGTTTACGTTTATAGTAGTTTTCGTAAATAGTAAGTATTATCTTGCCTATGTAAG TTGTAATCTGTAAGCTTGTGTTTCACTTATTTGTTGAATCTTCTCTTTCCCTTTTGGCTTTTCTCGCTTAGGGTCACTTTGGTATTAGTCGAAAAATGGG GGTGCCTACCGATTGGTTGTGTCTTTTGAATCCTTATGTCCCTTTCAAATTTTCAGCAGAAAGTGAGCATATTGATCTAACTGGTTGAGTCAAGAGCTAA CCATTTTTCAATTGTCACTTTTGTTTCTCCAATCTAATTTGCTGTTGCTCCAATTTTTGATATATTTCCAAAATGTTAATTGCTTACCTCAATTGTTTCT TGTCACTTGGAGATTTTTTTAATTTCAAATTAGCTACCATAAATCTAAATTTCACAAAGTTTTCTTTCAAGGCCTTTTCCTTAATTTTTTACCTCATTTT TGTTTCTTCGCTTTAGTTTGTCATTTCTATAATTTTTTGTATATTTCCTTAATGTTCAGTCTTTGCCCATCTGGTTTCTAGTCATCTGGCAATGTCTTTA TTGAACTTAACTTAAAAATTAGCTACAGCGGTATTAGTCTATATTTCCTTAATGGGTTTTCTTAAGTGATCCTTGGTTTAGCATCTCTAACCATATATCT TATTTATGGCTGTACCTTAAAAGGAATTAGAGGAGTTAGCAAGGTTTCACATTTGATATGGTTTTTTAATTTCAGTAGTGAAGTGCCACTCCTATAACAT ATTCCTTTCCTTTTTTGGTTTACTCTTTCTTTATATTTTGCTGTAGGTATTGAAAGAGAGATAGCATCACTTCAGATGGAGTGCAGGAGAAAAAATTGGT GGCAGAGATTAAGAAAGAAGCTAAAACTGGAAATGAGGCTGCCACTAGGATCTTGGCTCGTCAGCTTGTTAGGTTACGCCAACAGATAACCAATTTGCAG GGAAGTCGTGCACAGATCAGGGGTGTAGCAACTCACACACAAGCGTTATATGCAAGCACATCAATCTCTACAGGGATGAAGGGTGCGACTAAGGCGATGG TAGCAATGAATAAACAAATGGCACCAGCAAAACAGGCTAAAGTCATTCAACAGTTCCAAAAGCAATCAGCACAAATGGACATGACCATTGAGATGATGTC AGAATCAATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAGGAAACAGAAAACCTCACTAACCAAGTTCTTGATGAGATTGGAGTGGATATTGCATCC CAGTTATCTTCTGCTCCGAAAGGTCGAATTGGTACAAGGAATACTGAAAATGTTGCTCCAAGATCTGAATCCCAAGATGTTGAAGAACTTGAAAAGAGAT TGGCTTCTCTTAGAAGAATATAAAAAGGATGTGAACATCAAATATATATATATGCTGTAGTAATGGCAAGATTGTATAATTGGCACCCCATATTATTACT GAATTTTATGAGGAATGTAATGTGTTAGTTACCATCAAGAATTCTAGTTGTTTGGATCAATGTGCATTTTGGATCAATATGTCCTATGAAAAATAGTCCT ACCCTATAATTTCCATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_19609; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_3639
| Blastp | Vacuolar protein sorting-associated protein 2 homolog 2 from Arabidopsis with 78.51% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 2 homolog 2 from Arabidopsis with 81.68% of identity |
| Eggnog | Charged multivesicular body protein(COG5491) |
| Kegg | Link to kegg annotations (AT5G44560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416056.1) |
| Pfam | Snf7 (PF03357.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |