Ll_transcript_232781

Id TrinityFTRINITY_DN50300_c0_g1_i4
Name TranscriptLl_transcript_232781
SequenceCACTGTGTTCTTTAAACCATAAACCCTCTTTCTCTCTCTTTCTCTTCCTCTCACGCCGTCACCACTATCATTCCTTCACTGCAATAACTTCAACCCAAGT CATGGTTCAAACAACAGAAGGGGCAACGAATTTCGTTGAAGCGGTTGCGTTCAGTTTTTTAACTCATCAAGAGTTGAAGAGGAGTAGTTGTGTAACTATT AAAAATCCCATTTTGCTCGATGGTCTCGATCGACCTGTACCTGAGGGATTGTATGATCCTGCTTTGGGTCCATTGGATGAGAAATCTCCTTGTAAAACAT GTGGTCAAACCTCGAAACATTGCCCTGGTCACTTTGGTCATATTGAGCTCATTTTACCTGCATTCAATCCTTTGATGTTCAATATTCTTAAAAATCTTCT ACAGATAACTTGTTTCTCTTGTCATCGTTTTAAGGCTAGCAGACCTGAGGTGGACTTGTGTACATCCCAATTGGAGCTCATTATAAAAGGGGATATTATC AAAGCCAAAAATTTGGGTTCACTTAATCCAGAGGAAGCCATGCATCTGGGTGATGATGACAAGAGCCAGTGTTTTAGTGCTGAACAAATGGGAGAAAAAT GGACTTCCCTTCAATTTAGTGAGGCAAAGTCTGTTCTAAGGAAGTTTCTAATCAAGAAATATAGGAAGTGTCAAAATTGCAAATCCATCAATCCTAAAAT CACTACACCAACCTTTGGATGGTTTCATAAGACTGTTCTTTCGGCTGCTCATACAAGATCAAATATCATTAATGCTCAAGATGAATTCATGTCAAGTGAA GCTATCAATGATGATATTTCTTTTGAAAACGGGGATACTACAGATGTAGAGGATGTTGCCTTGGATGGGACTGGTAAAAGTGCTTCTAAAAAGCATAATT TGTCTCACATGCTCGCTAAGCTAGACGAACGTTCTGGGTCTTTCTTACCATCAAAGGTTAAAAGCATTTTCAAGCATTTGTGGGAAAATGAGGCTCGACT TTGTTCTTATATTAGTGATATTCAAGGTCAGGGGTTTGGAAAGAACACAGGTCCGTCAATGTTCTTTCTGGAGAATATTTTTGTTCCACCAATCAAATTC CGTCCCCCTACCAAAGGAGGTGATAATGTAATGGAGCATCCTCAAACTGTTCTTTTGACTAAGGTTTTAGAGTCAAACGAGTCCTTACGAGATGCGTGGC GTGCATATCTAGACGCATCAGGTTCCTCAAAAGTTGTAAGCAGCCGGTGGATGGAACTTCAGAAATCCCTGAACATCCTAATTGACAATAAAACATCTGG TCAAAAAGAAGCTGCTACAGGAATTTGTCAGTTGCTGGAGAAGAAGGAAGGCATCTTCCGCCAGAAAATGATGGGAAAGAGGGTCAATTTTGCTTGCCGC TCTGTCATATCTCCTGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTCTAAGATTAACTTATCCTGAGAGAGTCACTCCTTGGA ATGTAGCCATGTTAAGGGATGCTATCCTTAACGGTCCTGAGTCGCATCCAGGTGCCACACACTATGCTGATAAAGTTTCAATAGTCAAGCTTCCTCCAAA AGGGAAGATGCTTTCTTTGACATCAAGGAAGTTACCTTCCTCTAGAGGGGTTATTTTGCAACATGGGAAGATATCTGATCAGGAATTCGAAGGTAAAGTT GTATATCGCCACTTGAAGGATGGTGATATTGTACTCGTCAATCGACAGCCTACACTTCATAAACCTAGTATAATGGCGCATGTAGTTCGTGTTTTAAAGG GGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATTAATGTTCATTTTCCACAAGATGAAATTTC CCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCAGAGCCTTGATTCAGGATCATATTGTAAGT GCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGGTGTATCCATGGCTGGGATTGGCTCTTTCT GTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATATGGAAGCCAGAGCCGCTATGGACAGGAAA ACAGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGA ATCAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTG TAGTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCG TTTATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAA AGCTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAA AAATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACT ATCTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCT CATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAG GAGGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAA AACATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTT ATCCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCA ACTTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAA CACTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCT CAGTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAG AGATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGC AGATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATAT AAGCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGG AGTTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTC AGAAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGAT CTTGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGG ATTTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGG TGGTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAG AAAAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTC ACATTTTGTTGGCTCAGGTACTTTCATGCCTGACCTCTTTTTTTCTTCACCTATGTCAATGTTGTTTTAATTATTATCTGAGATGGATAGTTTCATACTA CAAACAGTCTATTTCTATATTCCCGTAGATTATATCATTATGTGCACCAGAAATAGGTTGATTTCTGCCTACGTCGTGGCCCCTTTAATTGTTTGGATCA GGTGTCATAATTGTGTACCATGGGTGTCTTTGAAGACGCTAGCATAGTAAGTTTGGATGGAGATTTAGTACAAAATGATAGGTCTAAATGCATTTCATGC AGTTAGTATTAGTTACTTCATTTATGTGATTATGTCCTTGGTTCTTGACAATGTAAAGAAGATGCTAGCATAGTAGATTGGATGGAGATTTAGTTGTTTC CTTTCATTAGTCATTTTCTGATCTCTTCCCTCCTTCTGAAATCAGAAATACTATCTGGCAGATATAGTCCTGTGCC BLAST
Tissueflowers
Gene nameLI_gene_19912; 
Additional informationdetails; 

Expression of Ll_transcript_232781

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_232781

BlastpDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 54.39% of identity
BlastxDNA-directed RNA polymerase I subunit 1 from Arabidopsis with 54.78% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT3G57660)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421167.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;