| Id Trinity | FTRINITY_DN50633_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_194418 |
| Sequence | CTTAGTCCTTGTAGATGCTCATGATTCCTTGAAGTACATAAATTCCTAACTGATAATGCTAACTACCTAAAAATCAGGAATGAATGATCTCATAATAACA TAAACCAGCCCCACTTCATTGCTAAAAAAAAAATCATAATTCTAGAAAAGACAGATTAAATTCCAAGTATTGAGTTATATTTTCAACACCTATTATTCAC TGTTCACCATGTCCAACACTTTCTTTGTCTTTATTGCTGTGCCCTCTATGTTATCTTATTGGTTTTGAGTTTCTAATAATGTCATTGAAACTTCACTCTT TCAAAATCAAATCTCATTCACCAACAAATGGCTTCCTTTGAAGAACTTCCTCAATCACAAGATAAAAAACCACTTTCTTCATATATATGCCATGATCCAA AAAGCCTTGGTTCCTCAAGGAACAAGGTAGAGAAAGACAAAAATGGTTCTTCTTCATCTCAATTCAAAAGGGTTGCTTTATCTTCAGAAAGATCAAATTC TAAGTCATTGGTGTCAGCAGATTCAAGAACTTTTGCAGGACCCCTTATGGATGAAGTTGCTATTAGAGCAGTGATTGCTATCCTTAGTGGATACATTGGA AGATATGTAAAAGATGAACATTTCAGGAGAACAATCAGAGAGAAGTGTAATTCTGTGTTGGAGAGAAGAATAAAGGACTCAAGTGATGATGAGTTTTTTG TGAACATGGAACTTGGTATGGAAAAAGTTGATAGATTAGTAGAAGATCAAGGGACTAAGAAACATGTCAAAAATTTGAGAAACTCCATTGAGATTTTAAC CATTGTTGCATCTTTGAATTCTAAAACTTCCAAGGATGCTTCAACTTGGGGTGTATCCTATTCCAATCTTTCTGCTTGTGCTGAATTGTATTTGGCAATA GCTTACAAGCTGCAGAAAAATGAAAGGGTTTCATCTAAGCATTTACTTCAAGTGTTTGGTGATTCTCCATGTTTGGCTAGAACCTATTTGCTACCTGATC TTTGGGAGCATTTTTTTCTTCCACATCTTCTCCATATCAAAATATGGTATAACAATGAGCTTGAGTTCCTATCAAATGAAGAGCATGTTGTGAAGAAAAA GAAAATAAAGGTATTGAGCAAAGTATACAATGAAAAAATGGATACTGGAACTACTTTGTTTGCTTTGTACTACAAGCAATGGCTTAAAGTTGGGGCTAGT GAGCCTCCTTTTCCTATTGTCTCCTTGCCATCAAGACCAAGTTATAGGTCATCAAGAAGAATGTCTTCCGATTCGTCCTTTTCAAATTCCTCCATCAACC CAAACTTATACAAAGCAGTGTTTGGCCCCCAACTAGAGCAGCAACCTTCTGGTCTTGGTGAACAGAATGGAGTGTTGACAATTAGTACATGCTCCGGGAC TGATGAAAAACTGTGTGGAGATGAATATCTTTGCAATTCTATTCAGAAAGAAGACAATATATATCCTGGAAGATGTTCAAGTCAAATCGACATGAGTCAT TCTCGAATATGGCCTGAGTCACAGAAATTGGACTATTCGCAGTGGTTTTCTTGCAGGACCATACCAAAAGAAAGCTTCACGAACAGCAACTATACATCGA AGAATGCTTTGATTAGACAAGAAACCAGTGTTTTTTCAAGTGATTTTGTTGGAGCTATTAGAACTTTATGTTCATCGGATATTCTAAGAGAATGTGAGTT TGCGATTCGTGTGATTACCAAAGCTTTGTTGAACTCTCCTGGTGATCCTCTCATTGAAGAAGCACTGACACAAACTAGCGTAATTGAAGCTATTATAGAG GTGTTATTTGCCTCAACTGAGGATGATGTTCTAGAATTGATTATATCAATTTTAGCAGAATTAATCGGAAAGAATAATGCAATTGGTGAAATTCTACTGA ACTCTGATCCTCAACTAGAAATATTTGTGAGACTTCTAAGAAGCAGTAGTCTGTTTCTGAAAGCTGCAGTTCTGCTTTATCTATCAAAGCCACAGGCAAA ACAGATGTTATCATCAGAATGGGTACCACTAGTACTTCGAGTGTTGGAATTCGGAGACAAATTGCAGACCCTATTCACAATACAGTGCAGTCCTCAAGTG GCAGCATATTACTTCTTGGACCAACTTCTTACTGGTTTCGACGAAGATAAGAATTTAGAGAACGCTAGGCAAGTTCTTTCACTCGGGGGATTGACCCTGC TAATGAGAAGAATTGAAGAAGGAAAGTTTCATGAGAAATATAATGCTTCTTTTATAATTTTGTGTTGCATTCAAGCCGAAGGAAGCTGTAGAAGTTTTTT AGCTGATAATATAAATAAGACTTCTTTGTTGGAACTCATTGTTCATGGAAATAAACAAAATTCCAGTGGCTATGCCTTTTCTGTGCTAGTTGAGTTGCTC TTTCTTGATAGAAGAACCAAGATTTTAAACTTCTTAAGAGGGATTAAAGATGGATGGGCTGGCTTAAACATAATGCACATTTTCTTCATTTACCTTCAGA AGGCTCCACCCGAAGAACGCCCCTTCGTTGCAGTGATATTATTGCTGCTTGATCATATGGTAATTCTTTCAACTAACTAGTGATCATATGAAATTATTGG CTTATATTCAGTGATCCAAGTTATATTACATTTGGACCAAGTAATACCTATCATTCTACCTTAAATTGATTTTAATATCTAGAAGAGTTCACAATGGAAT GAATAGCAGTTGTGTTGCAGGAAGATCCTTTGAAGGGAAGTTTATATAGAGAAGAAGCAATTGATGCAATTGTAGCCACTTTAAATAATCAAATATGTAA TGATAGAGTTCAGGAGCAATCAGCCAAAGCTCTACTCTTATTAGGAGGCCACTTTTCTTGCAGAGGAGAATCACTAATGGAAAAATGGCTTTTACAACAA GCCGGTTTTCGAGAAATTTCCTTAGAAGATTCATTTCCCGGCAACGAAATTATTGTTCATGATGCACTCTTCAATACTAAGGAGGAAGAAGATGAAAGTT GGCAACAAAGAGCAGCTTGTATCTTGTTCAAAAGTGGAAACAAGAATTTGCTGTCAGCACTTGCAGATTCAATAGCCAATAGCATTCCATGTTTAGCACG TGCGAGTCTTGTAACTATTTCATGGATGAGCAACTACCTCCACTTAGTTGAAGGTAGAAACTTGCCACAAATGGCTCTATCAATCTTAAGGCCACAGTTG CTACAATCATTGAATTATGATAAAGATGTTGAGGAAAGAGTGCTAGCTTCATATTCATTGCTCTCTCTAACCAAAAGTTCAGCATGTGTCTATGTCCTAC CATCAATGGATAAACACTCACTAAGAAATCTCAGAAATCTGTCTCTAGTGACTTGGACTGCAAATGAACTTATCTCAATCATCTCAAAAAGTAGCTTGCA ATCAAGACAATGATAAGCTGAATCTGTCAATGTTCATTCTTTCATATAAAGGTTACTACTGTAATCACCCTTGAATTTTTGTATAGTTGATTAGTTTGAA ATGGAATATTATGCACCAAGAAACATAATATTTGTTTTTTCCATGGTATAGCTTATTATGATGAAGTTCATGATCTGAAAAACTTGTTTAGCCTAAACAA GAAAGCAGCTACAGAAAAGTGACAAAACACTAAAAAGTAAAAACAGTCTTCAATGCTAATACATTTCATATTTAGCTTCATGTTGATCTCTCTATTTTAT CTTTGTTCCTAGATTACAAAATGTGTACTAATGTCACACTGTATTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20481; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_194418
| Blastp | Putative E3 ubiquitin-protein ligase LIN-2 from Lotus with 32.35% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase LIN-2 from Lotus with 31.76% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419626.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |