| Id Trinity | FTRINITY_DN50846_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_261309 |
| Sequence | CGAGAAGGCCATCCAGAGGACCATCCTCATGATGGGACGTTACGTTGAGGCCATTGAAGACGTGCCCTCTGGTAACATCTGTGGTCTTGTCGGTGTCGAC CAGTTCTTGGTCAAGACCGGTACCATCACCACCTTCAAGGATGCCCACAACATGAAGGTCATGAAGTTCTCCGTGTCCCCTGTCGTGCGTGTCGCCGTCG AGCCCAAGAACCCTGCTGACCTGCCCAAGCTTGTGGAAGGTCTGAAGCGTCTGGCCAAGTCCGACCCTATGGTGCAGTGCATCATTGAGGAGTCTGGTGA GCACATCATCGCTGGTGCTGGTGAGCTCCATCTTGAAATCTGTCTGAAGGATCTGGAAGAGGACCACGCCTGCATTCCCATCAAGAAGTCCGACCCCGTC GTGTCCTACCGTGAAACTGTCTCTGAGGAATCTGACCAGATGTGTCTGTCCAAGTCTCCCAACAAGCACAACCGTCTGTTCATGAAGGCCGTCCCCATGC CCGATGGTCTTGCCGAGGACATTGATGATGGCAACGTGAACCCCCGTGACGAGTTCAAGGCTCGTGCCCGCTACCTGGGCGAGAAGTACGACTATGACGT GACTGAGGCCCGTAAGATCTGGTGCTTCGGCCCCGACGGCACCGGCCCCAACATGCTGCTTGACTGCACCAAGGGAGTTCAGTACCTGAATGAAATCAAG GACTCCGTTGTTGCTGGATTCCAGTGGGCCACCAAGGAGGGTGTCCTGTCTGAGGAGAACATGCGAGCTGTCCGATTCAACATCTACGATGTGACCCTCC ACACTGACGCCATCCACAGAGGTGGTGGTCAGATCATTCCCACAACCCGTCGTTGCCTGTACGCCTCTCAGCTGACCGCTGCCCCGAGGCTGATGGAGCC CGTGTACCTGTGTGAAATCCAGTGCCCTGAGGTCGCTGTGGGTGGCATCTACGGTGTGCTCAACCGTAGGAGAGGTCACGTCTTCGAGGAACAGCAGGTG GCTGGTACACCCATGTTCGTCGTTAAGGCTTACCTTCCTGTCAACGAATCCTTCGGTTTCACCGCCGATCTCCGCTCGAATACCGGTGGCCAGGCCTTCC CTCAGTGTGTGTTCGACCACTGGCAGATCCTTCCCGGTGACCCCCTGGACTCCGGCACCAAGCCCTTCACTGTTGTCCAGGACATCCGTAAGAGGAAAGG TCTCAAGGAAGGTCTCCCTGACCTCCAGTCCTACCTCGACAAACTGTAAATTACTGTTCTTGTTAGGTGTAAGAAAATTGAAAAGCCTCTCGAATGTCAT TTACCCAAATTGTTTCTTTTGGAATTTTTTTAATGATATTTTACAGATAAGTAATCTTCAATGGGTGGTATTTTTTTCTATTGTGGTTTTATTTGTTAAC ACTTTGAGTGGTTGCCATGCTAGAGGATTGCTGAGAGAAAGACCGATTGTAAGAATGTGACATGAAATACAATGTCGGGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20892; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261309
| Blastp | Elongation factor 2 from Sophophora with 90.84% of identity |
|---|---|
| Blastx | Elongation factor 2 from Sophophora with 90.84% of identity |
| Eggnog | Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480) |
| Kegg | Link to kegg annotations (Dmel_CG2238) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015933027.1) |
| Pfam | Elongation Factor G, domain II (PF14492.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |