| Id Trinity | FTRINITY_DN50967_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_117050 |
| Sequence | TGAAGACACAAATTTGTCCAATGGAAACTACAAAAATTGCATTGCATCATTAACCAACGGACAAACAGCGCAAATCATAATCAACAGCTACGTCGATTCT CTCATATTTAGATTTATCATTAATTCAAACCATTAACTAATGAAAATTCTACCGGTTGAAGACAATTTTGAGTTTCACAGGATGTTTTTGTCATTAGGGA TTTAAGTTGTTTACAAAGATAAGCAGAGGAGGTCATTACATTATTATCTCCAAAACTCGAAAACTCTTACGCCTGTTGGATGTAATTTCGCTAAAACTCG GGGTTATGTGACATAATTGCATTCGATGCTCTGCAATCTCACCCTCTCACTTCACTCTACAGAAACTCCGATTTAACATCATGAGCAACGGAGGAAGAGC TGCATCCGACGACTTCGGCCGAGCTGTGTCCAACCTTGCGGTGGCTCAGCTCTGCCAATCCGCCGGATTCCACGCCGTCAACAACTCCGCCCTCGATGCA TTCGCTGACGTCACAATCCGTTACCTTCTCCAGTTAGGTAAAACGGCACAGTTTTATGCTAACCTCTCTGGTAGATCACATTGCACAGTATTCGATTTGA TCCTAGGGTTACAAGATTTGGAATCACCTCTAGGGTTTCCAAATCAACTACAACAATGCATCGTTAGTGAGCTCGTTAATTACGTTAATTTAGTTGATAA CGAGGTTCCATTTGATAAACCAATACCGCGGTTTCCGATTATTGGGTACCGGAGAAACTTACCGAGTTTTTCGCAATTAGGTGAGACACCAGCCTCTAAG CATATACCTAACTGGTTGCCTGCTTTGCCTGATCCTCATACTTATATTTACACCCCTGTTTGGAATGAGAGGGTTTCCGATCCGAGAGAGGATAAGATCG AACAGGCGAGGCAGCGTAGGAAGGCCGAAAGGTCTTTGTTGAGTTTGCAGAAGAGGTTATTGAGTTGTAGTAATGGTTCAGTAGAACGTAGTAGTATTGT TGCTGAAGATGCTTCAAAAGGACAATGCCATGAAGTGATTGTTGATAACAACTCATTGCAGGAGAGTAGTAAAGAGGTTTCTCCTGTGGTTGCAGTTCTT TGTAAGCTTTCGGATGAAGCCGTGGATGTGAAAGGTGGCGTTTCTGTGTTGGAGGTGTTTGCTCCTGCATTTGAGAGATTGAAAGGTGACGTTTTATGTG ATGATGGTGAGGAAGGGAAAAATGATCTTCCTGCTGTGAGGCCTACTGTACATTTTAAGTTTAGAGCTGTGAAGAAGTTTATTGGCGAGTCATTGGATAC TAGACATCAGAATAAGGGTGCTTTGAGAACAGCGTCTTTGGCTGGACGAGAAGACGAGAGAGATGATAAGAAGAGGAGAGCTGAGTACATTCTCAAACTG TCTATGGAAAATACAGAAGAACTGACTCTGTTGTAGACTTATAGATTAGTTTCTTAACTGGCTTTGCTGAATGAATGCATACTGGATTTTGCTAATTCAT TGTTTATATGAATGAGTTTGTTATTGATTAATGGTCTAGGGATCAGGGTTAGGTAGGTTTAATCCCAATTTGCTAGCTGAATGTGAGGATTTTGTTTAAC TTTCTAAACACTCTTTCCATTACTTCTTAGCTTGTGGGATGAGAATAGGATATAACAAGTTCTTGCCAAACTATCAACAACCATGAATGCATTTAGTACC ACAACTAGCCTTCAGTAGCATTATGGACAACTACACAAGACCAACACTGATTCGTGCAAGCTATTATAGGAGGCAATTTCAACAGCTTTGAGCAATCATC ACTCAGCTTCCGGTGTGGTTTTGCTTCTCAAAATGATATCTCATTTTCAGTATGGTAACAAACTTCAAAAAGGCATGCCTTGCCACACCTGCTTAGGCAA ACAAGTCATGGTTGTAGCCTTCTGAGAAAGGTTTTATAAGAACCATGGATTCTTCTCACCAAAGGAGAAGAATGAAAAGCAAAGAATGAGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21106; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_117050
| Blastp | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 42.78% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 41.16% of identity |
| Eggnog | TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410ZS4D) |
| Kegg | Link to kegg annotations (AT4G34340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414738.1) |
| Pfam | Bromodomain associated (PF07524.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |