Ll_transcript_271416

Id TrinityFTRINITY_DN51062_c0_g1_i5
Name TranscriptLl_transcript_271416
SequenceCTAATTTCTTTGAACATTTTTCCCTTTCTTCTTACTGTTCAATAGTGAAACCTTATCAGACCCTTACTGGTGCCTTTCAGTGTAATTACTTAAGCAAAAA ATTGTTAACTAACTTATAAGGGTACTTAGAAGTTTAATTGATGTTGTTGCTGTCATGGAAATCTAGAGGGAGTAAATTGATTCTGACTGACCTATATCTG TTGTTGCATATATACATTGTGATGTATGTTTACTTTTAGTGAATACCTCAACCTTAAAAGAATCAAATTCAACGACGATCTAGTTCATTTTAGATTATAG TTGATCTATATACATAAATGTGGTAAGAGGAATCTAGAAGGAAGTTGTATTTTATTTTTAGATTAGATGTCCCGTTTTGCAAGTTGGATTCGTTCCGTGT TTATGACTTTGAAGTAGTTTGACCATGTATAGTAGTGTTAGAATTTACATGTCCGCGTTTGGCTTGCCAATTGGAAGTTGATGAAGAGAATTGAGAATAT GATCATATTGTGTTAGATTTGTTTGAACCTTATGTGTTAGACGTTTGCAATGGTTTAAATTACAGTTGTGGTTGTGGTTACGTTGCGTTTAGTTTTGTTG TGAGGCTTGTCTTTGTTTATTCAACCTTCTCCCTTTTTTTCATCCGTTATTCAAGTCTATTCTATTTAGTTTTGTTTTTGCTAGTTGTTGGTTCATTGAT GTTTTTGTACTAGACTAGTAGGTGTTTCAGTCTTAAATAAATAGTAATGAGTTATGCATTATAGTTGCTTGAGGAAATTCCACAAGGAGAAATCCGATAA CAAAATTATTTTATTGGAAATAACATCCCCGGTATTGGTCTTATACACATCTTGCACTTTCTTGTGCATTTCTTTTGGAAGGTCTGAAGCTTCAACACAG TGTAAAGGACTAACCGGGTTCCACTCCAACAAGTTACCATTTTGGTGAGCCATAACTAAATCAACATACACAAATGTCTGTATTTCAAGCAAGAGCCATT CGACATGCACAAACATGTATATCTAGATGCTCTTATACTCTTCATTCTTGTCACTCACACACTCCCCGCTACATGTCTAAGCTTGCTCCTTTGCAGGAGA GGAAAATGAGAGACAGGGTTAAAATATTTGCAAAAGCAGGTGATGGAGGTGGTGGTTGTATCAGCTTTCGCCGTAGCCAACGTGATCGCCATGGCAGACC TGATGGTGGCAATGGTGGTAGAGGCGGTGATGTGATTTTGGAATGCTCTCGCAGAGTTTGGGATTATAGTGGTTTGCAGCATCACCTAATAGCTGAGAAA GGAGGACAAGGGTTATCAAAGAATAAGATAGGAACCAGGGGTGCTGACAAGGTTGTTCATGTACCGGTTGGCACTGTACTTCATCTTCTTAGCGACCATA TTCCTTCTGTAGTCAAAATTGAATCATCAGCAGATGTAGATCCTTGGGATATTCCGGGTGCACTTGCTGAAGATCTTTCTGACCCTGTTGGTAGTTCTTT CTCCAATGCTACAAGTGGCAAAGCTGAAGTTGAAGCAAGACATCCTACTGGCTGCTCCACATCACAAGGTGCTGAAACAAAGGTTGAGAAATCTTTAAAA TCAAGACAATTTGCACCAACGGATATATCTTCCCAACTTTCCAGTATGGACGACACTCTCAAATTTGGTACAGAAGATATAGGAGAGGAACAAGAGATAC AATACAGTGTGGCAGAATTAACAGAAGAAGGTCAACAAATTATCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGTGTCTATGTCGAAAGATTTAAG GAAGTCTATGGCTACAAAGGTAGGGGCCTATCAAGATAGACCAGATCTTGACGACTCGGACAGTGATTACTCCTCCCTGAGTGGAGGCGTGCCTGGTTCC GAGACTGTTCTTATATTAGAGCTCAAGAGCATTGCTGATGTAAGCTTTGTTGGAATGCCTAATGCTGGTAAAAGCACTCTACTTGGGGCTATCTCAAGAG CTAAGCCTGCTGTTGGCCACTATGCCTTTACCACTCTTAGGCCTAATTTGGGGAATCTCAACTATGATGATTTCTCAATAACCGTGGCTGATATTCCTGG ACTTATAAAGGGTGCACACGAAAACCGTGGACTTGGACATGCATTTCTGCGCCACATAGAGCGCACAAAGGTTCTGGCTTATGTAGTAGACTTGGCTGCT GCTTTAGATGGAAGGAAGGGAATTCCACCATGGGAACAGCTGAAAGACTTAATCCTAGAGCTTGAGTACCACCAGGACGGGTTATCCAATCGGCCATCCT TGATTGTGGCGAATAAGATCGACGAGGAAGGTGCAGAGGAAGTTTATAAAGAGTTACAGAGAAGGGTTCAGGGTGCTACCATCTTTCCTGTGTGTGCTGT TTTGGGAGATGGTATACCAGAACTTAAAGCTGGCCTTAGATTACTTGTCAATAGTGAAATGTCATCTACACTTTCCTTGGATCAAATTTTTATAGATTAG ATTACTATTAACAACTACTCATGTATTTGTCCAAACACCCCAGTTAGGAAAGATAGACCTGGAATTGTTCTATGCAGGGTTGAGGCCTTTTTTTGGTACA TGCATTTGTGAAATCCAAAATAAACTCCCTAAAAGCAATGGTCTTAGCTTCATCAAACATCTAGTATGTGCCACATTAGTATATTTTTTATATTGTTGTT TTGATTTGGTCATACCAATGGTTTATAGCTTTTCTATCTGATTTTATCACAGAATTAGGATTCAGTAATGCTTCTTCAGTAAGCATTTTCCCATCAATTT TAACTCTCCAAACTTTGTTAATTGGGACAGGGGAGATATACTAATTAGCATTTTTC BLAST
Tissueflowers
Gene nameLI_gene_21314; 
Additional informationdetails; 

Expression of Ll_transcript_271416

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_271416

BlastpProbable GTP-binding protein OBGM, mitochondrial from Arabidopsis with 57.62% of identity
BlastxProbable GTP-binding protein OBGM, mitochondrial from Arabidopsis with 57.62% of identity
EggnogAn essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate (By similarity). It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control(COG0536)
KeggLink to kegg annotations (AT1G07615)
CantataDBLink to cantataDB annotations (CNT0002738)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019453178.1)
PfamGTP1/OBG (PF01018.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;