Ll_transcript_262117

Id TrinityFTRINITY_DN51256_c0_g1_i4
Name TranscriptLl_transcript_262117
SequenceGTTGTATTTTCATCCCCTCACGAATTGTCCTAACAAGACAACACAGACGAAGAAACATTAAGAGACAGCTTCTGTCTCTCATCTTCGTTAACAATCTTCC AACCTCTGCATTCCAATGCATTATTCCATCCTTATTTCTCTCTCTCTCTTATTCACCATTTCATCCTTCATTCTTCCAAAATGCTTTTGTTTTTCTTCAC AATGTTGCTTATTTTGAATTGAATTCCACATTTGTAGCCACATTTTGAGCAATTCCAAGATTGGACATTTCTGATTCATTAAAGGTTTACAATTCTAGGG TTTCATTTTGGAGTTCTTGCATGTGCTTCTTTTTCTCTCTTTCTAGCTTATTGAATTAAGAGCTGTAAATGGGGTAGATAAAAACAGCTCCTTTATAAGA ATTGATGGAGAGAAGAAGAAGAAGAATATGTTGGACATTCATTTCTCATGATTTCATTCTTAGTTCTTCAAATGGGTATTGCTTCCATTCCTCTCATATT ATTACTATTATTGTTGCAACTTGAATGGCTGATCCTCATAAAACACCTTCTCTTGCCCCTGACAAGGATATCGACCAGGCAATCTCATCTCTTAAGAAAG GCTCACATCTCTTAAAGTATGGGCGAAGAGGGAAGCCGAAGTTCTGCCCATTTAGGCTTTCCAATGATGAATCTCTACTCATATGGTACTCTGGCAAGGA AGAGAAACAGATTAAGCTCAACACTGTTTCAAAGATCATCCCGGGGCAGCGAACTGCAACATTTCAGCGGTATCCTCGGCCTGAGAAGGAATATCAGTCA TTTTCTCTTATATATAATAGTGATAGGTCCTTGGATTTGATATGTAAAGATAAAGATGAAGCTGAAATCTGGTTTGTTGCTCTCAAGGCATTAGTTACTC GAGGTAACAATCGCAAGTGGAGATTCGAAACAAGATGTGAAAGTGTGTACTCTGATAGTCCACATTCTGGCACAGGAAGATCCACTCCATCAGTTACACC ATTTGTCTGTCGCAGTAGCTTTCATCTTCTGTTGTTTTTTGAAGTTCATATTCTGTTGTCTATAGACATTTAAAAATTGCTATAATTTTCACTGTTTCTA ATTTCAAACCACAGGACCCAGGAGACAGCGACAGGGTGGTGTTTGACAATTCTTTGCAAAACAAATGGGTAAAGGCTTTCTCTGAAATAATTTCATATTC TGCAGCTAGCAAGAGTCCCTGCCAAACTGAATTAATTGCAACTTCCTCTTTCTCCTCTACGTCTGTGGATACCTCAAACTATCGAAATTCTGCGTCTGAG GCAATTCGTATTAGCCTATCCAGTGCTGTAAGTTCATCCAGCCAGGGTTCTTATCATGATGATTTTGATGGCTTAGGTGATATTTTTATCTGGGGAGAAG GTGTTGGTGATGGAATTCTTGGTGGTGGAGCCTCATCTAGTTTTGAGATAGACGCATTCCTCCCCAAGGCCTTGGAATCAAAAGTAGTTCTGGATGTTCA CAGTATTGGTTGTGGCTACAAACATGCTGTTATAGTTACCAAGCAGGGAGAAATATTTAGTTGGGGGAAGGAGTCAGGAGGCCGGCTTGGTCATGGTGTA GAAGTTGATGTTTCTCACCCTAAGCTCATTGACACGCTTAGTGGCATGAATATTGAATTAGTAGCATGTGGAGAAAGTCATAGTTGTGCTGTTACATATT CTGGGGATCTTTTTACTTGGGGTGATGGTACTCACAATTCTGGCTTGCTTGGGCATGGAAATGAAGTCAGTCACTGGATTCCTAAAAAAGTAAGTGGTAA CATGGAGGGTTTACGCATATCATATGTGTCGTGTGGACCTTGGCACACAGCTGTTGTTACCTCAGCTGGGCAGTTGTTTACATTTGGGGATGGAACTTTT GGTGCCTTGGGTCATGGAGATACTAGTAGCACAAATATTCCTCGGGAAGTAGAGACTTTGAAGGGGTTGAGAACAACCAAGGTTTCCTGTGGTGTTTGGC ACACTGCTGCGGTTGTTGAGATGATAAATGAACCTGTGGAATCTTCTACACACTCTCCTGGTGGAAAACTGTTCACCTGGGGTGATGGAGATAAAAGCCA ACTTGGACATGGTGATAGGGAACCCAGACTAGTTCCTGAGTGTGTAATTGCATTGGATAATGAAAACATTTGTCGAGTGGCTTGTGGTGATACTCTTACA GTTGCTTTGACAACCTCAGGATATGTGTATACAATGGGCAGTGCAGCTTACGGACAACTTGGCTGTCCTGCGGCTGATGGGAAAGTCCCTACACGTGTGG AAGATATTATCGTTGACAGTTTTGTTGAAGATATTGCTTGTGGTTCTTATCATGTTGCAGTCCTGACTTCCAAGACAGAGATTTACACATGGGGGAAGGG TTTGAATGGGCAATTAGGTCACGGAGACAATGATCACCGGAATAAACCCACACTAGTTGAGTTTTTAAAAGATAAGCAAGTGAAGAGTGTTTTTTGTGGT TCAAACTTCACTGCTGTTGTATGTCTTCATAAATGGATACCAAGTGTTGACCATTCTGTGTGTTCTGGATGTCGTAATCCTTTTGGATTCAGAAGAAAAC GGCATAATTGTTATAACTGTGGTCTTGTCTTTTGCAAAGCATGCACTAGCAGGAAATCAATGAAAGCTGCCCTTGCTCCTAATTCCAACAAGCTGTATCG GGTTTGTGATGACTGCTATTCTAAACTTAAGAAATCTGCAGACTCAGTTTCCTCGCGCCAAAGTGTTAGTTTGAGAAGTGCAAGTGTGCAAGATGGTAAG GTCAGTAAATTACAAGGATCCTTATTAAGGCTTTCATCTTTCGGTTCTATTACTCAAGCAGAGAGCAGTCACTCAAAGCTTCCTGAATCACATGATAGTC ATCTCTTTCCATCTTTGAATGGAAAACTACAAGTGGGGGGTTTTGCTCCTTCAAAATCATCAAATTCTGTTTCCGAAGAATCCAGGAAACTCCTTTCAGT TTCCGTGCCTGCGCCAATAATATCTTGCCATCCATCATCTCCAGGTTCTTCAAAGTCAAGCCCACGAAAATCTTGTGAAGATATCAATGATGATTCAAAG CAAAGAAATGAAATTCTAAGTCAAGAAGTTATAACTTTAAGGGCACAGGTAAACCTGGTGATCAGATATATCCTATTCATCTGTGCTCCCTTCTATAACA CCTTTGCATAGACCTGATGAAATTATGTAGATTTGTTCTGTTTTTGTGGGCAAACCTTGTCTTCCAATTTTGAATTTTGTATTTATGCTTCATGCTTACG TTATATCCATTTAAAACAGTCTAAAATGGGACTTTCATGCTTTATGTGTACAGTACACGAGTAACACTGGTCTCCTTCGGACTGATGCATTGCCAC BLAST
Tissueflowers
Gene nameLI_gene_21677; 
Additional informationdetails; 

Expression of Ll_transcript_262117

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_262117

BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 50.93% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 50.3% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421757.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF13540.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;