| Id Trinity | FTRINITY_DN51564_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_27180 |
| Sequence | TTAGCATTTTCCTCTCAAATCTGAATAGACTTGTGCATAGTTTTCCACTTTTCCTTATTTTGTCTCTAACAAAAAACTCTCTATCCTTTGGTTAAGCTTA GTCAACTTTAATGGAGCAAGAACAAGTGCAAAATCAGTGGATACCATTACCAGCAGAGGATAATGATGAAGAAGAAGAAGAAATAAAGGATACTATAGCT TTGGAAAGAAAAATACCACCCCATCATAAAAAAGATACTACTTTTTCCACTGATGTAACACCACCCTCTTCTTCCTCTTTCTTTTCTTCTACTTCTCCTA TTAGCAATGGCCATAGTAATGGTGTTTCTTCAGGCTCAGTGGAAGAACCTCTTATTCTCAAGGAGGAAGAGAAGGAACCTCATATTCAGAAGGATGAGGG AGTTTCTGAAAATGGGAATCATGAGAGTGAAGCAATTGGGCTTGGAATTGTAGCTGAGTTTGTTGGAGATGCTATAAATGGAGAAGCTATACATTGTACC ACTGCTACTATTGATGTTGCTGCATTTCAGAATAGTAGTGCTGTTTATTTTGACAAACAACAAGGAATGTGGAAATGTCACCACTGCTCATGGACCAAGC GAATTGACAGTTCTTGGAACGTGCCCCAGTACAATGCCTTGCTGATGAATCACAAAACTATGATTCAATGTGGACCATGTTTTTTTTGTGAAATTAAAGG CAATGAAGTTAATGGACTTGAAGGGGTTCAAAATGGTGATGGTGAAAGGTCTGTTCTTCCAGAAAGCAACGGGGAAGGAGAATCTGAGATACAAGTAGAA AATTCAGATATCCAAAATGGTCTACTCAATGAGGTCAATCAAAATGACAAAGTCCATTCCAGATCAGAATTATCACCTCTACATAATTCATCGGAAGTAC AAGCTACAACTCCGCAGGCTTTCGGTGATGAAACTAGTGCAAAAGCAACTGCTAACTTGACAAATGAAATTGATCAGCAACTGGAAGACTTTAATGTTGA GGCAGTGTTGGCAAAACAAGAGACACATGACTTGTTCTGTCCTAATTGCAACTCTTGCATTACTAAAAGGGTTATCCTCCGGAAGAGGAAAAGGAACATT CCTAAGCTAGACACTGAAACAAAGCCTGATAAGCCAGACACTAAGAGGGGTAATAGTTCTTCTGAAGATGATGTCATTGTCAACCAAGGTGGTCATGCAA GTGCAATATCCGATGCTGGTAGTCTATTAGCACATGATGTCAACCAAGGTGGTCATGAAATTGGAATACCTGATGCTGGTAGTCTAGCGGCACCTGCTGG TAATTATGAGCCCGAAAGTGAACCAGAAGTATTCAGATGTTCAACATGCTTGAGCTTCTTTATTGCCCTGAGAAATGGACTGTTCCCATGTTTTGCCGAT GCTCGTGAGCCTGAAACTTCACAACCTTTGATTATACCAGCATCAAATTTGGAAAATCCTTCACATGTAGCAGCTCCCAATGCAAATTGGTTTAGCTCTC TATTTACAAGCAAAGAGAAAAAACCTAGAGAGCATGCTGTAGATGCTGATTTTGTTGAAAATTCTAGAGCTGGTTCTTCTGAACCACATCACCCATCTTC AACTGCCATCAATATGCAAACCACTATAGGGAATGGTCATCCAGAAGGTCCACTTACTGATAGAGCTATAAGTAACAATGTAAAATTGGCACCTGATAAT GAACCTGAACATGGAGTAAATTCTCCGAATCCCTCATCTGTGCAATTAGTAACGACCGAAGCAGGGAAAGAAAATGGTCATCCAGAAGGTCCACTTACTG ATAGAGCTATAAGTAACAATGTAAAATTGGCACCTGATAATGAACCTGAACATGGAGTAAATTCTCCGAATCCTTCGGCTGTGAAATTAGTAACGACTGA AGCAGGGAAAGAAAATTACATCAAATCCAGAATCTCATCAGGGAGTGAGCCATTGGATGATCAGAAATATCTTAAGTCGTCCATTCAGAATAATTTACCA TCAATACAACCCTCTATACATAGTTTCAGTAATGTGATGAATGAATCAGAGAAGGTTGGAGTGGATTTTATAGATTCTTCGTCAAAGGAACCTTTTCTGA CTGAAAATGTGAAGACTGACGTGGGAGAGAAAAAGAATGATTCAGTGGATATGATGAAGACAGATATGCCCTCAATGAATTTTCCTGGTGATATGGCTTC CAAGAGTGAGCATGTTCCATCAGCGACTGCTGCGATTGCCGAAGGGTCTCTAATCCGTAAGAAGTCACATAAAGGAGTAGAAAAGTCACCTGCAATTACT CAAAATGGTCATTCCTCTTTGGTGCAAGAAGCACAATCACCCGCACAAGCGTTTAGCAATGCAGTAGTTGCAAGTGACACAGCCGGAGCGTTGAAATCCT CAACACCCCAGACAGCAGATGGTGTTCCGGTTCAATCCACTGTGGCAGAACCACACACTGAAATAGATATTGGAGAACAACCAAGAGCTGAAATGGGTGA ACCACCCTTAAAATGGGAAATACTTAAAAGCATTGTGTATGGTGGCTTACTTGAATCAATCACAAGTCTAGGGATTGTGTCATCTGCTGCTGGTTCGGGT GCTGTTCCATTGAATATTGTAGCAATGGGATTCGCGAATCTGATTGGTGGACTCTTCATCATTTTTCATAATCTTATTGAATTGAGAAATGATCACTCTG GAGGGGATCTACAGCAAACAAACTTTATGCAAGAAGATCGGTATCAAGCACAACTCGGGCGCCGAGCAAACTTTCTACTTCATATTGTTGTAGCTATTTT ATCATTCCTAATTTTTGGCTCTGTCCCTATTATTGTCTACGGCCTCCTGATTCATAAGAATTACTCTGGTGAGCTTAAGTTTGCAGTAGTGGCAGTTACT TCTATTATATGCATCATTCTGCTTGCGATCGGGAAGGTTTACACCAAAAGCACGCCGAAATCATATACTACAACTTTGTTACGATATGTTACCTTGGCAC TTGCAGCCTCTGGAGTTTCCTACATAGCTGGAGGACTAATTGATAATCTGTTAGAGAATTTCAATGACCCAAAGTCAGGTTTTGTTCTTACCATTCCCTC TACAGGCACCAGAAGTGTGAAACCAGCATGGGTGCCTTACTGAAGCAATGAGATTACTAAAAGGAGTTTGAACTTCTTAGTGTTTAGTATTCACATCCTT GTAGGGCTTGTATGGAATAAGCATACTTCTGGTAAAACTTGAGAGTTCTAATAAGCTTTTTATTTTATGTGTCTTGACTACTTGGATTCATTCATCTATG TTACACAAAGTGGAATCTTGGAGATGAATATTCAATAAAATCTTTCTTTTGGTTTTGCAGTGGACCAAGGGGACAAAAAAGTTTGCACTAGAGGAATTTT GAGATAGTGCATGTTTGAGAAATAATATCTGTGGTTAAATTATTGTTTATTTTTTGTACCATATAATTTGAGTTATTTTGAAATAAGTTAATTCAAATAC ACACATTGCATGGGGTGGTTTCCTATGCTATTTATAAAATGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22313; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_27180
| Blastp | Membrane protein of ER body 1 from Arabidopsis with 46.34% of identity |
|---|---|
| Blastx | Membrane protein of ER body 1 from Arabidopsis with 45.85% of identity |
| Eggnog | VIT family(ENOG41129ND) |
| Kegg | Link to kegg annotations (AT4G27860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417204.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |