Ll_transcript_26363

• Id Trinity: FTRINITY_DN51762_c0_g6_i3
• Name Transcript: Ll_transcript_26363
• Sequence: CTTCTTTTTCCTTCTTTCATCCCATTAGACATTAGTTTGCATTTGCTCAATGTACTTGTGTAATGTACTTCTGCATTTGTACTTGCTTTGGAAGTACATG ACTTTCACTTAAGTAGAAGTAAGACATAATTTGAAATGTAAGTTCCAAGAGTTGTGTTAATTCTAACTTGGAGGTGAAAAATGGAGATCATAATATAATA AGTCACAAGGTTTTAAGTGTCTTGTGTCAATAATACAAATTGATGGAGAAAAAGAAGATGCAAACCATATGATTAAAGCGGGGTTGATGGAATGTTGAAG TGCTTTGAATATTATTGTACTTTGTGGTAAAAGTGTACTACTCAACCGCAAGGGAAAAATTTATTGTACGAAACTGTATGTTAGGCTGTTAGCGATAAAC TGCCAAGAGAATGAACTGAAAGTAGCAGAGACAAACATACTGAGTTGGATGAGTGGACACACTAGACAAGATAAGATTGTGAGTTAATGCATTAGAAAGA TAATTCAGGTAGAATATGGTAGAATCTCTTCTTATGTGATTTGGGCATGTGTGAAGGAGACATAGAAGCCCCCATTAGGAGTGTAGATCAGATGGATAGT ACTATTTTTAGAGGTACATAGAGACCACGAAAAACTAGGCGGAAATACTGAGTGGCTCAAATATCATTGGTTTGCATATGAACATCAATTATGATAGAAC ATTATGACACAATATGATCCATGTAGCCGACTCCACCTTATCAAAGCTTGACTGTTGTTTAGGTTGCTCTATTCTTTTGTCAACATGTTAATGTTTGAGT TTTTCTTATCGCCATCAGTATTGTTCTGAAACATGTAGATTTTGGCCCATATATGCTTATGGAACAATTTCTCTATTTCATGATATACCATGTGCAGGTG ATTCGAGAAAATCAAGTGGTGGTAGTGGTTGGAGAAACTGGTTCTGGAAAGACAACACAATTGACACAGTATCTGCATGAGGATGGATACACTATAAATG GCATAGTAGGCTGCACCCAACCGAGGCGTGTGGCAGCTATGAGTGTTGCCAAGAGAGTTAGCGAGGAGATGGATACAGAGCTGGGCGATAAAGTTGGCTA TGCTATACGTTTTGAGGATGTGACTGGGCCAAATACCATTATAAAGTACATGACAGATGGAGTACTTCTACGTGAAACACTCAAAGACTCTGATCTAGAC AAGTATCGGGTTATTGTTATGGATGAAGCCCATGAAAGATCACTCAGTACAGATGTTCTTTTTGGAATATTAAAGAAGGTTGTGGCACAACGTCGCGATT TCAAGCTGATTGTTACATCAGCAACTCTTAATGCACAGAAATTTTCGAACTTCTTTGGAAGTGTGCCTGTTTTTCATATTCCTGGAAGAACATTTCCTGT GAATATATTATGGAGTAAAACTCCAGTTGAAGATTATGTTGAAGGTGCAGTGAAGCAGGCTATGACTATTCACATAACCAGTCCTCCAGGTGACATCCTT ATCTTTATGACTGGCCAAGATGAGATTGAGGCAGCTTGCTATGCCCTTAAGGAAAGAATGGAACAGATGGAGTCGTCTTCAAAAAAAGAAGTCCCTAAAC TCTCAATTCTTCCCATATACTCTCAGCTTCCTGCAGACTTGCAAGCAAAGATATTTGATAAAGCGGAAGAGGGAGAACGTAAGTGTATCGTTGCCACTAA TATTGCTGAAACATCATTGACCGTTGATGGTATCTACTATGTCATAGATACAGGCTATGGTAAAATGAAAGTATATAACCCCAGGATGGGCATGGATGCT CTCCAAGTCTTCCCTGTCAGTCGTGCTGCTGCTGACCAGCGTGCTGGTCGAGCTGGTAGAACTGGGCCTGGAACGTGCTATCGGTTGTATACGGAGAGTG CTTACTTAAACGAAATGTTGGCCAGTCCTGTTCCGGAGATTCAGAGAACTAACCTTGGCAATGTGGTCCTGTTGCTGAAATCTCTTAAAGTTGAAAATTT ACTTGATTTTGATTTCATGGATCCTCCTCCCCAAGATAATATTCTCAATTCTATGTACCAGCTGTGGGTCTTGGGTGCCCTTAATAATGTTGGGGGTTTA ACTGCTCTTGGATGGAAAATGGTCGAGTTTCCGCTGGACCCTCCACTTGCTAAGATGCTTCTGATGGGCGAACAGTTAGAGTGTCTTGAGGAGGTTTTGA CAATTGTTTCCATGCTTTCAGTACCATCTGTTTTCTTTAGACCCAAGGACCGAGCAGAGGAGAGTGATGCTGCTCGTGAAAGATTTTTTGTGCCGGAATC TGACCATTTAACCTTATACAATGTTTATCAGCAATGGAAGCAGCATGATTACAGAGGTGATTGGTGCAATGATCATTATTTGCATGTTAAAGGTCTAAGG AAGGCTAGAGAGGTGAGATCCCAGCTGCTTGATATTCTCAAGACTTTAAAGATACCCTTAACCTCCTGTTTTCCGGATACAGACATTGTCAGAAAAGCAA TTTGTTCAGCATACTTCCACAACTCCGCAAGATTAAAGGGTGTGGGGGAGTATGTTAACAGCCGGAACGGTATGCCGTGTCATCTTCATCCCAGTAGTGC TCTCTATGGTATGGGTTGCACTCCCGACTATGTGGTTTATCACGAGTTGGTCCTGACTTCGAAGGAGTACATGCAGTGTGCCACAGCAGTGGAGCCGCAA TGGCTGGCCGAGTTGGGACCCATGTTTTTCTCTGTTAAGGAGTCTGATACATCATTGCTGGAGCATAAGAAGAGACAGAAACAAGAGAAAACAGCAATGG AAGAAGAGATGGAGAATTTGAAGAAGGTGCAAGCAGAGGCTGAGAAAGAAATGAAACAGAAACACAAGGAAAAGATGGCTAAGCAGCAACAGCAAATCTC CATGCCGGGTTTGCGAAAGGGTTCTTCCACTTTTTTGAGACCAAAGAAGTTCGGTTTGTAATAACACTATCAAGTATTTACTTGTAGTAGCCTCATACAT TCTCATTGTAATAACAAAGTTAGAATTTGTACCCATTAGGTTACTGATGGTCTCATATGAATTCTAGGTAATGCACATTCATTATTTAGTTTGCTTTGCA ACCTTGAGCACTGTATCTGTTGATATATTGTTTTTACTCAAATCAAACAACTTCAATTTGTTAATTTACATTAACAAGAAATGACAGAAACCGTGTTTTG AAACGTTAAAC
• Tissue: flowers
• Gene name: LI_gene_22811;
• Additional information: details;

Expression of Ll_transcript_26363

FPKM

• FPAB: 0.5
• FPNAB: 0.3
• LF1: 0.1
• LF2: 0
• LF3: 0.1
• LF4: 0.8
• UF1: 0.1
• UF2: 0.3
• UF3: 0.1
• UF4: 2.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_26363

• Blastp: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 86.54% of identity
• Blastx: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 86.54% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT5G13010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457682.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;