| Id Trinity | FTRINITY_DN51938_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_143697 |
| Sequence | ACAAGTTTTAAGACAACCTTTTTGTGTTCTTGTTGGTTGTGTATATATAAGAGGGCCTTGTCGTAATTGAACAAAACATAACATTTCAGCACATTCTCAC TCTAGCTCCCAACAAAAAAGCTTGTTTTTGTATTTGCAATGGAGGGTTTTGGTTTAAGGAAGATGAATGATGTTGTTGTTGCTGCAGTAGATGATGAATT TGTTGAAAAAGAGGATACCCAGATGGAGAAAGAGAAAGAAGATGAAGAATATGTGAAAAATTCTGAAGAAGAAGAAGAAGATGATGATGATGTAGTTGGA AATGGAAAGGGTCCTGGTCCTGTTTCTGATGATTCTCAAATGTACCCAGTTCAATCAATTCGTAGAAAGAGGGTTAGGAAGGGTCAGGTCCAGTACCTTG TAAAATGGCTGGGATGGCCGGAGTCAGCTAACACTTGGGAGCCTCCGGAAAATCTCGCAAATGTCCCTGACATCATTGAAGCTTTTGAGCAGAGGTATTC GCTTTTTCTTCCATGTAACATTTACAGTTTTCTTCACGATTTTGCGTTCCAATTATGACCAACGATGAAAAGCATGTTCCAATTATGTTTTGCGTTTGTT TGTGTTTGCTATGATTACAAATTCGCTGCTAATAAGGATAGGTCTAACATTGTAAGAGCAGGAATTGGTTTCACTTAATGACTACTTTGTATAACTTTTC TGTTTACAAATATTTGTTTCTTCACGATTTTGAAGCTCGGGATCAGGAAAACAGCGTAAGCGTAGACACAATAATGTGTTTCATAGTGCCCAACTGAAGA AGAGGCAGGAGCGTTCTAGTACTCCTTACAGCCTTAGATGTATTACCGATACTACAGCTGACAACCATACACCTTCTGCTCCTCTGAACGAGCTTAATCT TACCGGTCATTGTGCTTTTCCTCAACCTGTGCTTTTTGCTGATGTATTGGAAGACAAAGATGATGGCAGCAATCTTAGAAAAGTGAAAGTTTCTAATGGT AGCGGGTCTTCAAATCTTACAGAACTTTCTAAAGGCAATGACGAAAATGACTACGATCCTAAGCTCAGCGAGCTTAAAGCAGCCACAACCAATGGGCATG GTGCAGACAAGCCTGTCGTACAGTGTCAAGAAGGTAAGGTTGCTGCAGACAGTGATCAAATGGATGGTCAATCGAAGGGTGTTTCCGTGGAACAAGTTCA AAGTGACCACTCCAGAGGAGGTAAAAGGAAGAAACCTTGTTCTGCAAAGAAGTTGAAGGAAGATTCACATGCTGGTGAACCTGTTACTGCAGAAAAACCA ATTGGCACATCCGCCAGTACATTTGAACCGGCACGAACAGGGAATGCTGATCATGAGGGTAACAACAGTAAAAAGAAGACGGTTCTCGTTAACCCTCTCT GCAATATTATCAAGATTTTAAGGCCACTAGGCTGTTCACCTACAGCATCTGCCGAAAACCTTTGTGTGACCTTTATGGCCTTGAGGTCGGACGGAACCGA AGTGATCGTTGACAACAGATATCTCAAGTCACACTATCCTCAACTGCTGATCGAATACTACGAGCAGCGTATCCGATACAATCCTTGATGACTGAACAGA GTATTTAAGGTTGTTTGTAGTTAGATCTGAATGTGTTGGTAGTTTTATAGATGCAGCAAGTAGTGAACTGTTAGTGATATTTAGGTATATGATTACTATA TAACTATTAGATTTGCTACATACTGTGATGATGCATTTGTGAAGAAAGTTAAGAACAAAACTATTTTGGATTAATGTCAGGTTTTAATTTGTTAGCATAT TTTGTATTTGGCAATGTTTTGAATATTGATATGGTTTAACTGTTAAAGGACATAGCAAATCTTTAAAATGAAATGCTATGTATCACTGAATAAGGTGGTT TGTGTAACATGCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23293; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_143697
| Blastp | Chromo domain-containing protein LHP1 from Arabidopsis with 66.04% of identity |
|---|---|
| Blastx | Chromo domain-containing protein LHP1 from Arabidopsis with 36.22% of identity |
| Eggnog | chromobox homolog(ENOG4111JKD) |
| Kegg | Link to kegg annotations (AT5G17690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465358.1) |
| Pfam | Chromo (CHRromatin Organisation MOdifier) domain (PF00385.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |