| Id Trinity | FTRINITY_DN51974_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_144363 |
| Sequence | CTTTATTCTTTTCTTCTTCCAATCCAAGTATCCAACTCAAAATGCAGCTCTCTCACTCTCACTCTCACTCTCACTCTCTTCTCTCACCACCTTAATGGCT TAATCACAATGTCTTATATTTCTAGGGTTTCCATTTTCTCACTCACTCTAACATTACAAATTTCCCAATTATTCTCACAGTCTTGATACCAACATTCTCC TTCACTTCCCATCTACACCTAAACACAAAAAAGCATGGTTCTTTGTTTCCACCACCACAAACCCACTTCAATTTCACATTCCTTTTCTCTGATCCATTCT TGAAATTTGAGGGTTACATTTGTAAAAATTGAATTTTTTTGGAAATTGGTTTTGGACAATGATTTCTTCTGGGGTTAACTTGGTGATGACTGTTATTGGG TTTGTTGTGAGCACCATGTTCATTGTTTTTGTATGCACAAGGCTTATATGTGCTCGAGTTCGCTTGAATGCTTCTAGGAGATCCTTTCCTGTAGCTGCCA GATCCAATCTCAGCATGATGGAACGGGGTTACCATGGTCTTGAATGTGCAGCTGTAGCCAAATTTCCAAAAAAGAAGTACAGCGATAAGTTTTTTTCTGA CGCGGAAAATACCCAGTCTTGTGGTCATTTGTTTTTGCGACTCTGATGGTATATATTCTCTCATCTATGTTGCATGAGTACTTCAAAGAAGGTGACAAGT AGATACTCGGTACCGGTGCTCTTGGGTACTCCTTTGGTGAGAGTTGTTTATTTTAGGCTGGAAACTTAAAGATTTTTCCCTTTTTTCTTCTTAGCCACAT CAGAATACTGAATCCGAGTCACATAATTAGTCTCCCATCTTTACATCTAAGCTGTATTTGGGTCTCAACTCTCATCCTAAGACCCTCACATCCTCTGCTA GTTCAAATTTTAATCATTTATACATAATCATATTGTGCACCCGTACCTTAGATTTTCAAAAAATGTCATATCTCATACTCGTATTTGTACCAGGTACTGG TACCGTCCCTTATTCGTGCAACATAGGCTCTCATGTTCTGGAAAATATGTATCTCATCTTGCTTTAGTATACTAAAAAATTGAAATTATCGGAAGAAGTC AATTAAGCATGTGGATACTACATAATATTCTTTTGTATGTAAAGAGATCGCTTTGTAGCCATAAAATTCAAGGCATTAGTATTTGCTATTGGTAAAACAT TTCTTTCGAAGTTGTGAAGATTTGGATAGTACCGTTCTTTACAGAACAATAAGTGTAAAAGAAACATTTGTTGTGGGCATGTACACTAACATCTGGTGAA TATTCTTGCACACCATACCTTTTCTTCTAATACACTGCTTTCTGATGACCTACAATCCCACATCCACCATTCTCATTGACATGAGTCAAACATATATACT TAAAACAAACTCCGATTTTCTATTGATAGACGTGTATATTCATTGCAGAAAATTGGGAATATTCTTACCCTTCTCTTGAAAGTTACACATTTGTTCAGTT GTTGACTATCCTATGTGAAGTGTTTTTCCAGTTGCATGGCATTCTAAAAGGCTTCAGAACTTCAACCTTTAACTTCTTTATGTTTGTAATTGTGATTAAC TGATCTAAGTTATCATGAATATTAACTTATGGACATCTTGTGGTATTTTTAATCCAAACACAAAATTTCCACCATCCTTGATCTTTTCAATTTTGTACTC TCATTGCTAATGATTTCTATACTTCAAATCTCTATTTGCCATTTGGCGGTTTTAATAAATATTCAGTTTTTATTTATTTAAACATGGGCCAATTTGGTCC ATTTCTAAACCACTTTACTTTTATTTGGATGATTATCCCTGTTTGACTTGCAATCAAACATGCTGAAAATGATCTGTTTTACTTTCCAACTTGTGACAAA CTTGTTCTGTTTCTTGCTAAAGGCAAACAGAATGACATTGAAATTTAGAAATTTTAGTGCATGAATAAAAGCTGTCATATTTGATGAGTTCAGAATGCTT CTAGAGAAATAAATTGTCTCTCCGGCACTCGGCTATTAAAAAAATTAGTATAACTGAGTGTCTCAATGATGAGCAGTTTCCCTATTCCAGGTGTATTATC ACTATCATTTTCCTGGATGCTTATCAGCACAGTCTTTTGAGCTTCTGCTTTTTTTAATGGGAGCAGTTCTTTAGCCATGTTTCCTTTTGCTGAATTGATA GTGTGGTACTGTTAACTGTCTTAGGAGTTAGGACTAATTCATGTCGGTGTCTTGAACAGGTTTTGCCGTCATAATAAGTTTTGTTCACTTGTTGCAGTGG AACTTTTATTAGAAGGTATTTTCTTTGTTTTCTTTGCGTGTGAGAGATAGTGTGAGAGCGAGAGTGAGGGGGTTATTTTGTCTTTTCTTTTTAGAGGAAA ATATACTTGCATCTGCTGTAATGGCTTTTCTTTGAACAAAATCTTTGAACTCTTTTCAACACACATACCTTCTTTGCACAATATTCCATACCAATGAAAA TTATAAGATTAGAGAGGTTACTTTAACTTCAATGACTGAATGGATGTAAGTATATGTATAACTAAATCAAACATCATGAACGATCAGTGCAATTTATTCT TGTTATTATGTACTTTTATCGGTCTCACTTCTAAATGATCATCAATGGACACTTCTCATTCAGATAATTATTTCCTGGTTACGATTATTCAATTTTGTCG TATGTGCAGATGCTCAATCTGCCTATCAGAGTACCAAGGTGACGATGTACTGCGTATCCTCCCCTATTGTGGACACTCATTCCATGTGTCTTGCATAGAC ATATGGCTGCAGCAGAATTCAACTTGTCCCGTTTGTCGAATATCGTTGCGCGGATTTCCTGAGAGAAAGCAACTTATGCAACCCTTATCCAGCTCCGCTT TGCGACTTCATTATAGCATGGAATCGTTTGACAGTGATCATTATTACTGTATGATGACTAATAATGGATTATCATCACCAATCCCTGAGAACAATGCGGC AAACACTACACCGGAGGGTCATTTCCCACCCGAGGGTGGTCTGGAACCTGCTAGGGACACTATCACCTGTTTAAGTCCGGGTGATATCATTAAAGACGAG AGGAAGAAACATGTTGAGAGCCCATCAAATTTCTAGATTCGATTCTTCATTGTGGTCCTTCGAAATCACCAATCGAGTAAAGGTCATGTTTCTAAATTGA ACTAAAATGCTTTTTGGCATGCTGAAAGTTGGTTTTATTGCTTTTCTTTCATTTTGCTGTATATATAGCAGAGAATATTTTTTTCTCCCCTCATTGGGAT ACCCTTGACTGTATTTGAGATTTATTTTCATTCTCTCTATCCCTCTTCCTTTTACAGTTGTAATTAGTCCTAAGACTAGAATTAGTTAAATATAAGATGG TGTTTTTCCTGTGTTTCTTTTAACATGATGGCCATTGCATTAACACAGTTCATGAACTGCCATTAATGTATCTTGGTTTTGGCCAACAAGTATATGATCT CTTTGTAACACACTAACACATGGGTAATTATTTTGAATATGCAATAATTATGGTCCTTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23408; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144363
| Blastp | E3 ubiquitin-protein ligase ATL59 from Arabidopsis with 36.73% of identity |
|---|---|
| Blastx | RING-H2 finger protein ATL34 from Arabidopsis with 39.13% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT4G10160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433202.1) |
| Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |