Id Trinity | FTRINITY_DN52059_c0_g1_i8 |
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Name Transcript | Ll_transcript_221265 |
Sequence | AGTGGCCTTCCCTTTAGGGGCATCGATGCCTTTTCTACGAGAAGAGAGAAGAAGCTGCGCTGTCCATTTCGCCTTCATTTAATTTTCTATAATCTCTTCT TCCAACACCGTGTTAGGTTTTTCTCTCTAACTCCTTTCACTTCACCCTTCTTTCCTTTCTTCAATCTTCATTTTCTCACTTCACACCCTAACCACTTTTC ACTTAAACCCTCATTTCATCGATTCTACATCAAAAATCAAAAATCAAAAATCAAAAATCAACAAAATAATCTCATCCTCATACGTTTATTTTGATGAGTA GTTTCTTCTGGTAAAGGAGTTATGGCGTCGAAAGGTCCTAGGTATAAGATTGATCATGATACAAAAGCGAAACGGCAAAAGGCCCTTGAAGCTCCAAGGG AGCCTAAGCGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGCGTGGTTATCAAAGGACTTTGAGTCAGAGAGGAAATGGAAATTAGCACAGGC GAAGAAAGTTGCTTTAAGAGCTAGCAAAGGCATGTTAGATCAGGCTACAAGAGGTGAAAAGAAGATGAAGGAAGAAGAGCAGCGGGTAAGAAAAGTCGCA CTGAGTATATCCAAAGATGTTAAGAAATTTTGGACGAAAATCGAAAAGCTGGTTCTTTACAAGCACCAAATGGAGCTTGATGAGAAGAAGAAAAAAGCAC TTGACAAACAGCTTGAGTTTCTCTTGGGGCAAACTGAGAGGTACTCCACAATGTTGGCCGAAAATCTTGTGGATGCTTATAAACCACAAAAGCAGAATTC TCCGGAGCTTCAAATGCGTACAGAATACAAGCATGTAGACGGAGACATTACTAATGAAGCTAAGGAAGTTAATGTTGAAGAGTATCCATCAGATGCACCT GACAATGATGAAGAATATGATGTACAATCTGATGATGAATCGGTGGATGATGAGCAAACCCTTGAGGAAGATGAGGCTCTTATAACTGAAGAAGAAAGGA AAGAGGAATTGGCAGCTTTGCGTGATGAAATTGATCTTCCAATTGAGGAGTTACTAAAACGTTATGCTGGAGAGAAAGGAGAACCAGAAAGGCAAGAAAG TAGTCCAGAGCATAGTAAAGATGCTGTGCAAATAATTAGAGCTGATGATGGTGATGAAAATGATGATATTTTATCTGTCAGCAAAGTTGTCTCTAGCAAC TCCAGCATGTCCCCTGGTCGACGTTGTGACGAAAGTAATGGTGATAAAGCTACACAAGCAAGCAATCTATCTCAATATGAGGACCATCCACCTGAAAATC CTAGTGAGGTTCCCAGTGAGATGGCCAATGAAGTATTGCATATGACTTTAATGATGAAGAGGAAGATGCTGACTTCTTGCTTGGAACAGAAGATAAGTCT TAACTTCATTACAATGATCAGGATGACGAAACAACCTTATCCGAGGAGGAGAAACTGGAAAGGGTTGACGCAATTGATCCAAGGGATGAGATTGCATTAT TGCACAAGGAGAGTGACATGTCTGTTGAGGAACTCCTTGCAAGGTATAAAAAGGATCTGGGTGATAATGAAAAATGGGAAGATGATTCTGATGCTTCTTC TTTATCAGAGGATCATCGGGATCCTCCAGTTCATGAGGAAGCTGGAGCTGCTGTTTCTGTGAATGAAAATATCAAGTCTGGTGAGCACCTGGCTATTGTA CAGTCCCAGGCAGAAGAACCTTGGGAAGCGCCTCCCGAGAATTCAGAAAAAACAGAAAGTGAGTATATCATTGCTGACGCAGCTGCTGCTGCAAGATCAG CACAGCCAACGGGAAACACCTTCTCCACAACTAAAGTACGTACGAAGTTCCCATTTCTACTCAAGTACTCTCTTCGTGAGTATCAACACATTGGATTGGA TTGGCTTGTCACAATGTATGAAAAAAGATTGAATGGAATTTTAGCAGATGAAATGGGGCTTGGAAAAACAATCATGACTATAGCTTTGCTTGCACATCTG GCTTGTGAAAAGGGGATTTGGGGCCCACATCTAATTGTGGTACCAACAAGTGTAATGCTTAACTGGGAGACTGAGTTTTTGAAATGGTGTCCTGCTTTTA AAATTCTGACTTATTTTGGAAGCGCAAAGGAGAGAAAACATAAAAGACAAGGATGGCTGAAACAAAACTCATTTCATGTATGCATAACAACTTATAGACT AGTTATTCAAGATTCAAAAGTTTTTAAGCGCAAAAAGTGGAAATACTTGATCTTAGATGAAGCTCATCTCATTAAAAACTGGAAGTCACAGAGGTGGCAG ACGCTCCTGAATTTTAATTCAAAACGACGTATTCTCTTGACTGGTACACCACTGCAGAATGATCTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGC CTCATGTTTTCCAGTCTCATCAAGAGTTTAAGGATTGGTTTTGTAATCCTATATCAGGGATGGTAGAGGGAGAGGAAAAGGTTAATAAGGAGGTTGTTGA TCGCCTGCATAATGTCCTTCGTCCATTCTTGCTCCGTCGATTAAAGCGAGATGTGGAGAAGCAACTTCCAATGAAACATGAGCATGTCATAAACTGTAGA TTGTCAAAGAGGCAGCGGAATTTGTATGAAGACTTCATTGCTAGTTCAGAGACCCAAGCCACTCTTGCAAGTGCCAATTTTTTTGGGATGATTAGTATTA TCATGCAACTTCGTAAGGTTTGCAATCATCCTGACTTATTTGAGGGTCGTCCTATTGTCAGCTCTTTTGATATGTTGGGTATTGATATTCAGTTAAGCTC TTCTGTTTGCTCCATCCTTTTGCCCAGTACCTTTTCTACAGTAGACCTAAGAGGTTTAGGTCTTTTATTTACTCATCTTGACTATAACATGACTTCTTGG GAAAGTGATGAAATCCAAGCTATTGAGACCCCTACAAGTTTAATCATGGAACGTACTAATGTGGGTGACCTGGAAGTTATTAAGCCTGGACTGAAATCTC AAAAAAAGCTGCAAGGAACAAACATTTTTGAAGAGATCCAAAGGGCAATTTGGGAAGAAAGGTTAAGACAGGCGAAGGAACGTGCAGCAGCTATTGCGTG GTGGAACTCCTTGAGATGTAAAAAAAGACCCATCTACTCAACCTCCCTAAGGGATCTTGTTAGCATAAAACATCCTGTATATGATATTCATCAGGTGAAG GCAAACCCTGTTTCATACTTGTACTCAACAAAGCTGGCTGACATTGTCCTATCCCCAGTTGAACGATTTCAAAAGATGACTGACGTAGTTGAAAGTTTCA TGTTTTCAATCCCAGCTGCACGAGTGCCTTCCCCTGTGTGCTGGTGTAGTAGAATTGAGACACCTGTGTTTCTGGATTCATCTTACAAGCAAAAATGTTC TGAAGTTCTGTCACCATTACTGTCACCTATCAGGCCAGCAATTGTTCGCCGGCAAGTGTATTTCCCAGACAGGCGTCTAATACAATTTGACTGTGGGAAA CTGCAGGAATTAGCAATTTTGTTAAGGAAATTAAAATCAGAAGGTCATCGAGCTCTGATATTTACCCAGATGACAAAGATGCTTGATATATTAGAGGCAT TCATTAATTTGTATGGTTACACTTACATGCGATTAGATGGATCAACTCAACCAGAGGAAAGGCAGACCTTAATGCAGCGTTTTAACACAAATCCCAAATA TTTTCTTTTCATATTGTCTACCCGTAGTGGGGGTGTTGGTATCAACCTAGTTGGAGCTGACACAGTGATATTTTATGATAGCGACTGGAATCCTGCTATG GATCAACAGGCTCAAGATCGGTGCCACAGAATTGGTCAGACACGTGAAGTTCATATCTATAGATTGATTAGTGAAAGCACCATTGAGGAGAATATTTTGA AGAAAGCAAATCAGAAGCGTGCACTTGATGATCTTGTTATACAAAGTGGGGGTTATAATACTGAGTTCTTTAAGAAGCTTGACCCTATTGAACTGTTTTC AGGTCATAGAACACTTTCTGTAAAAAATATCCAGAAGGAGAAAAACCAGAACAATGGAGAAGCTTCTGTAACCAATGCAGAGGTAGAGGCTGCATTAAAA GATGTAGAAGATGAAGCAGATTATATGGCATATAAGAGAGTTGAGCAGGAAGAAGCTGTGGACAACCAGGAGTTTACAGAAGAAGCCATTGGGAGACTTG AAGATGATGAGTATGTTAATGAGGATGACATGAAGGATGATGAGCCTGTCGAATTCGGTGAATCTGTTCCCAGTTTAAGTAAAGAGAACTTGTCAATGTT AAATGGTAATGATCCTACGGAAGATAGACCACCCTCTGTTCCTAACAAAGAAGACGATGTTGACATGATTGCTGATGTCAAGCAGATGGCTGCTGCTGCA GCTGCAGCTGGACAAGCAATCACAGTGTTTGAGAGTGAGCTACGTCCTATTGATCGATATGCCATTCGTTTTCTGGAGCTGTGGGATCCAATTATAGATA AAACTACATTGGAATCTGAAGTCAGGATTGAGGACACAGAATGGGAGTTGGATCGCCTTGAAAAGTTTAAGGAGGAGATGGAGGCTGAAATTGATGAAGA TGAGGAACCTCTTGTGTATGAAAGTTGGGATGCTGATTTTGCAACTGAGGCATATCGGCAGCAAGTGGAGGCCTTAGCTCAACATCAGTTAATGGAGGAA CTCGAATATGAAGCTAAACAGAAAGAGAAAGCTGAGGAAGAAAATTGTGATTCTAAAATGACTCAAACACCAAGTGATTCAAAGCCCAAATCTAAAAAGA AACCCAAGAAAGCAAAGTTCAAATCTCTGAAGAAAGGATCGTTAACATCTGGCTTGAGATCTGCAAAACAAGAGCCACAAGCGGATACAATGACTATAGA TGATGAGGATGTCAACAGCTTGGCTTTTGGTACTCCAGAGTCAACTTCGCAGAAAAAACGTAAGATATTGAAGCCAACAACTGATGGTGAAGAAAAAAGA CTGAAGAAGTCCAAAAAGATGAAGAGAAAATCTCCTGACATTTGTGCTTCAGATTTAGATTCCAACTCATTAATTGTGCTGGATGAACACACAGAGTCAA AGCTGGGTGAAAGTCTGGTTGATTTTGAACAGAGAATGGCAGGCAGGAGTAAGATGGGAGGAAAAATATCCATTACTCCAATGCCAGTAAAACGGATATT GGTGATAAAACCGGAAAAACTGAAGAAGGGAAATCTTTGGTCCAAAGATTGTATTCCATCAGCTGATTTTTGGTTGCCTCAGGAAGATGCAATATTATGT GCCATAGTTCATGAATATGGTTCTAACTGGAATTTGGTTAGTGAAACACTTCATGGCATGACTGCAGGGGGGACATTCAGGGGGAGATATCGCCATCCTG TCCATTGCTGTGAGAGGTTCAGAGAGCTATTCCAAAAATATGTCTTGCACTCGACGGACAATGCAAATCATGAGAAGATCAGCAACACTGGCTCAGGAAA GGCTCTTCTTAAAGTTACAGAGGATAACATTCGGATGTTGTTAGATGTTGCTTCTGAGCAGCCAAACAGAGAGTTACTACTGCAGAAACATTTTTTTGCA TTGCTGTCGTCTATCTGGAAGGTGTCAGCACATGTTGACCGCAGGCAGAATCCATCACCTACTTGTAATGGTCTCTATTTTGATCAGAGTTTCTTTACTT CCAAATGCCAACAATCACAGAATTCCTTGAAGAAACCCTCTGAAAGGATTATGTTTACTAATTTGGCCCAGAGCAAGAAATTAATAGCTGCTGCTCTGGA TGACACAATAAGTAGGTCAGAGAGTGACAAAATCCTCCCAGCTAATCAGGGTAAAGAAATGCCATTGAGTGCAGATAAGCTGGATATAACATTGGAGTTC CAGAAAGAGGAGAGTGATGTCTTATCTTCATTTCCATCTGTTATAAATTTATCAATTGATGGGATTGGAGCTTCACCATCTTTAAATAAGCAAACAGGAG AATGTGACCATCTCAGAGGTTGTCTGTCTGCTGCTGAGAATCGTTTCAGGGAGGTATCAAAAACTTGTGAGGAAGACAGTCCTGGATGGGCTTCATCAGC ATTCTCGACAAACGATTCAAGGTCTCAACCTGGATCCAGGATACAATCCTTGGGAAAGCAAAAAACTTCAATCTCTGAAACTTCTAAGCATTCCAAGTCG AAGTCGAAAAGAGTTTCAATGGATCCCAGTGACATGCAACAGGCTGAGCCATCACTCCAGTCAATGCCACCACATAAGGAACTGAAGTTTGATCTTACTA CATCCACTATGGATATAGTTGGAATTGATGATATGGATACCAATCCCCCCTTTGGTTTGCATTTGGAAAATTCATTTGAAAGGGAGAGTTCTGAAGCTGT CCCACATGATTATCTAGATGGTTTAATCTTTGGCCTTGATGATTTAATTGAATTCCCTGAATACACTGACATTAGATAGGGTCCAATGATAGCTTGAAAT GCAGTTTTGAACTATTCCTCTTTGCCATTTGAGTACAGTCTTGGCAAGCTTTCTTGTCAATTCATGAACAACCGTTTCTCCTCTTGATCTAAATTTTATT GTTGTTGGTATTTACATTTACATGTāBLAST |
Tissue | flowers |
Gene name | LI_gene_23656; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_221265
Blastp | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 64.84% of identity |
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Blastx | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 74.06% of identity |
Eggnog | chromatin modification(ENOG410XP0A) |
Kegg | Link to kegg annotations (AT3G12810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414895.1) |
Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |