| Id Trinity | FTRINITY_DN52059_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_221266 |
| Sequence | AGTGGCCTTCCCTTTAGGGGCATCGATGCCTTTTCTACGAGAAGAGAGAAGAAGCTGCGCTGTCCATTTCGCCTTCATTTAATTTTCTATAATCTCTTCT TCCAACACCGTGTTAGATACGTTTATTTTGATGAGTAGTTTCTTCTGGTAAAGGAGTTATGGCGTCGAAAGGTCCTAGGTATAAGATTGATCATGATACA AAAGCGAAACGGCAAAAGGCCCTTGAAGCTCCAAGGGAGCCTAAGCGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGCGTGGTTATCAAAGG ACTTTGAGTCAGAGAGGAAATGGAAATTAGCACAGGCGAAGAAAGTTGCTTTAAGAGCTAGCAAAGGCATGTTAGATCAGGCTACAAGAGGTGAAAAGAA GATGAAGGAAGAAGAGCAGCGGGTAAGAAAAGTCGCACTGAGTATATCCAAAGATGTTAAGAAATTTTGGACGAAAATCGAAAAGCTGGTTCTTTACAAG CACCAAATGGAGCTTGATGAGAAGAAGAAAAAAGCACTTGACAAACAGCTTGAGTTTCTCTTGGGGCAAACTGAGAGGTACTCCACAATGTTGGCCGAAA ATCTTGTGGATGCTTATAAACCACAAAAGCAGAATTCTCCGGAGCTTCAAATGCGTACAGAATACAAGCATGTAGACGGAGACATTACTAATGAAGCTAA GGAAGTTAATGTTGAAGAGTATCCATCAGATGCACCTGACAATGATGAAGAATATGATGTACAATCTGATGATGAATCGGTGGATGATGAGCAAACCCTT GAGGAAGATGAGGCTCTTATAACTGAAGAAGAAAGGAAAGAGGAATTGGCAGCTTTGCGTGATGAAATTGATCTTCCAATTGAGGAGTTACTAAAACGTT ATGCTGGAGAGAAAGGAGAACCAGAAAGGCAAGAAAGTAGTCCAGAGCATAGTAAAGATGCTGTGCAAATAATTAGAGCTGATGATGGTGATGAAAATGA TGATATTTTATCTGTCAGCAAAGTTGTCTCTAGCAACTCCAGCATGTCCCCTGGTCGACGTTGTGACGAAAGTAATGGTGATAAAGCTACACAAGCAAGC AATCTATCTCAATATGAGGACCATCCACCTGAAAATCCTAGTGAGGTTCCCAGTGAGATGGCCAATGAAGTATTGCATATGACTTTAATGATGAAGAGGA AGATGCTGACTTCTTGCTTGGAACAGAAGATAAGTCTTAACTTCATTACAATGATCAGGATGACGAAACAACCTTATCCGAGGAGGAGAAACTGGAAAGG GTTGACGCAATTGATCCAAGGGATGAGATTGCATTATTGCACAAGGAGAGTGACATGTCTGTTGAGGAACTCCTTGCAAGGTATAAAAAGGATCTGGGTG ATAATGAAAAATGGGAAGATGATTCTGATGCTTCTTCTTTATCAGAGGATCATCGGGATCCTCCAGTTCATGAGGAAGCTGGAGCTGCTGTTTCTGTGAA TGAAAATATCAAGTCTGGTGAGCACCTGGCTATTGTACAGTCCCAGGCAGAAGAACCTTGGGAAGCGCCTCCCGAGAATTCAGAAAAAACAGAAAGTGAG TATATCATTGCTGACGCAGCTGCTGCTGCAAGATCAGCACAGCCAACGGGAAACACCTTCTCCACAACTAAAGTACGTACGAAGTTCCCATTTCTACTCA AGTACTCTCTTCGTGAGTATCAACACATTGGATTGGATTGGCTTGTCACAATGTATGAAAAAAGATTGAATGGAATTTTAGCAGATGAAATGGGGCTTGG AAAAACAATCATGACTATAGCTTTGCTTGCACATCTGGCTTGTGAAAAGGGGATTTGGGGCCCACATCTAATTGTGGTACCAACAAGTGTAATGCTTAAC TGGGAGACTGAGTTTTTGAAATGGTGTCCTGCTTTTAAAATTCTGACTTATTTTGGAAGCGCAAAGGAGAGAAAACATAAAAGACAAGGATGGCTGAAAC AAAACTCATTTCATGTATGCATAACAACTTATAGACTAGTTATTCAAGATTCAAAAGTTTTTAAGCGCAAAAAGTGGAAATACTTGATCTTAGATGAAGC TCATCTCATTAAAAACTGGAAGTCACAGAGGTGGCAGACGCTCCTGAATTTTAATTCAAAACGACGTATTCTCTTGACTGGTACACCACTGCAGAATGAT CTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGCCTCATGTTTTCCAGTCTCATCAAGAGTTTAAGGATTGGTTTTGTAATCCTATATCAGGGATGG TAGAGGGAGAGGAAAAGGTTAATAAGGAGGTTGTTGATCGCCTGCATAATGTCCTTCGTCCATTCTTGCTCCGTCGATTAAAGCGAGATGTGGAGAAGCA ACTTCCAATGAAACATGAGCATGTCATAAACTGTAGATTGTCAAAGAGGCAGCGGAATTTGTATGAAGACTTCATTGCTAGTTCAGAGACCCAAGCCACT CTTGCAAGTGCCAATTTTTTTGGGATGATTAGTATTATCATGCAACTTCGTAAGGTTTGCAATCATCCTGACTTATTTGAGGGTCGTCCTATTGTCAGCT CTTTTGATATGTTGGGTATTGATATTCAGTTAAGCTCTTCTGTTTGCTCCATCCTTTTGCCCAGTACCTTTTCTACAGTAGACCTAAGAGGTTTAGGTCT TTTATTTACTCATCTTGACTATAACATGACTTCTTGGGAAAGTGATGAAATCCAAGCTATTGAGACCCCTACAAGTTTAATCATGGAACGTACTAATGTG GGTGACCTGGAAGTTATTAAGCCTGGACTGAAATCTCAAAAAAAGCTGCAAGGAACAAACATTTTTGAAGAGATCCAAAGGGCAATTTGGGAAGAAAGGT TAAGACAGGCGAAGGAACGTGCAGCAGCTATTGCGTGGTGGAACTCCTTGAGATGTAAAAAAAGACCCATCTACTCAACCTCCCTAAGGGATCTTGTTAG CATAAAACATCCTGTATATGATATTCATCAGGTGAAGGCAAACCCTGTTTCATACTTGTACTCAACAAAGCTGGCTGACATTGTCCTATCCCCAGTTGAA CGATTTCAAAAGATGACTGACGTAGTTGAAAGTTTCATGTTTTCAATCCCAGCTGCACGAGTGCCTTCCCCTGTGTGCTGGTGTAGTAGAATTGAGACAC CTGTGTTTCTGGATTCATCTTACAAGCAAAAATGTTCTGAAGTTCTGTCACCATTACTGTCACCTATCAGGCCAGCAATTGTTCGCCGGCAAGTGTATTT CCCAGACAGGCGTCTAATACAATTTGACTGTGGGAAACTGCAGGAATTAGCAATTTTGTTAAGGAAATTAAAATCAGAAGGTCATCGAGCTCTGATATTT ACCCAGATGACAAAGATGCTTGATATATTAGAGGCATTCATTAATTTGTATGGTTACACTTACATGCGATTAGATGGATCAACTCAACCAGAGGAAAGGC AGACCTTAATGCAGCGTTTTAACACAAATCCCAAATATTTTCTTTTCATATTGTCTACCCGTAGTGGGGGTGTTGGTATCAACCTAGTTGGAGCTGACAC AGTGATATTTTATGATAGCGACTGGAATCCTGCTATGGATCAACAGGCTCAAGATCGGTGCCACAGAATTGGTCAGACACGTGAAGTTCATATCTATAGA TTGATTAGTGAAAGCACCATTGAGGAGAATATTTTGAAGAAAGCAAATCAGAAGCGTGCACTTGATGATCTTGTTATACAAAGTGGGGGTTATAATACTG AGTTCTTTAAGAAGCTTGACCCTATTGAACTGTTTTCAGGTCATAGAACACTTTCTGTAAAAAATATCCAGAAGGAGAAAAACCAGAACAATGGAGAAGC TTCTGTAACCAATGCAGAGGTAGAGGCTGCATTAAAAGATGTAGAAGATGAAGCAGATTATATGGCATATAAGAGAGTTGAGCAGGAAGAAGCTGTGGAC AACCAGGAGTTTACAGAAGAAGCCATTGGGAGACTTGAAGATGATGAGTATGTTAATGAGGATGACATGAAGGATGATGAGCCTGTCGAATTCGGTGAAT CTGTTCCCAGTTTAAGTAAAGAGAACTTGTCAATGTTAAATGGTAATGATCCTACGGAAGATAGACCACCCTCTGTTCCTAACAAAGAAGACGATGTTGA CATGATTGCTGATGTCAAGCAGATGGCTGCTGCTGCAGCTGCAGCTGGACAAGCAATCACAGTGTTTGAGAGTGAGCTACGTCCTATTGATCGATATGCC ATTCGTTTTCTGGAGCTGTGGGATCCAATTATAGATAAAACTACATTGGAATCTGAAGTCAGGATTGAGGACACAGAATGGGAGTTGGATCGCCTTGAAA AGTTTAAGGAGGAGATGGAGGCTGAAATTGATGAAGATGAGGAACCTCTTGTGTATGAAAGTTGGGATGCTGATTTTGCAACTGAGGCATATCGGCAGCA AGTGGAGGCCTTAGCTCAACATCAGTTAATGGAGGAACTCGAATATGAAGCTAAACAGAAAGAGAAAGCTGAGGAAGAAAATTGTGATTCTAAAATGACT CAAACACCAAGTGATTCAAAGCCCAAATCTAAAAAGAAACCCAAGAAAGCAAAGTTCAAATCTCTGAAGAAAGGATCGTTAACATCTGGCTTGAGATCTG CAAAACAAGAGCCACAAGCGGATACAATGACTATAGATGATGAGGATGTCAACAGCTTGGCTTTTGGTACTCCAGAGTCAACTTCGCAGAAAAAACGTAA GATATTGAAGCCAACAACTGATGGTGAAGAAAAAAGACTGAAGAAGTCCAAAAAGATGAAGAGAAAATCTCCTGACATTTGTGCTTCAGATTTAGATTCC AACTCATTAATTGTGCTGGATGAACACACAGAGTCAAAGCTGGGTGAAAGTCTGGTTGATTTTGAACAGAGAATGGCAGGCAGGAGTAAGATGGGAGGAA AAATATCCATTACTCCAATGCCAGTAAAACGGATATTGGTGATAAAACCGGAAAAACTGAAGAAGGGAAATCTTTGGTCCAAAGATTGTATTCCATCAGC TGATTTTTGGTTGCCTCAGGAAGATGCAATATTATGTGCCATAGTTCATGAATATGGTTCTAACTGGAATTTGGTTAGTGAAACACTTCATGGCATGACT GCAGGGGGGACATTCAGGGGGAGATATCGCCATCCTGTCCATTGCTGTGAGAGGTTCAGAGAGCTATTCCAAAAATATGTCTTGCACTCGACGGACAATG CAAATCATGAGAAGATCAGCAACACTGGCTCAGGAAAGGCTCTTCTTAAAGTTACAGAGGATAACATTCGGATGTTGTTAGATGTTGCTTCTGAGCAGCC AAACAGAGAGTTACTACTGCAGAAACATTTTTTTGCATTGCTGTCGTCTATCTGGAAGGTGTCAGCACATGTTGACCGCAGGCAGAATCCATCACCTACT TGTAATGGTCTCTATTTTGATCAGAGTTTCTTTACTTCCAAATGCCAACAATCACAGAATTCCTTGAAGAAACCCTCTGAAAGGATTATGTTTACTAATT TGGCCCAGAGCAAGAAATTAATAGCTGCTGCTCTGGATGACACAATAAGTAGGTCAGAGAGTGACAAAATCCTCCCAGCTAATCAGGGTAAAGAAATGCC ATTGAGTGCAGATAAGCTGGATATAACATTGGAGTTCCAGAAAGAGGAGAGTGATGTCTTATCTTCATTTCCATCTGTTATAAATTTATCAATTGATGGG ATTGGAGCTTCACCATCTTTAAATAAGCAAACAGGAGAATGTGACCATCTCAGAGGTTGTCTGTCTGCTGCTGAGAATCGTTTCAGGGAGGTATCAAAAA CTTGTGAGGAAGACAGTCCTGGATGGGCTTCATCAGCATTCTCGACAAACGATTCAAGGTCTCAACCTGGATCCAGGATACAATCCTTGGGAAAGCAAAA AACTTCAATCTCTGAAACTTCTAAGCATTCCAAGTCGAAGTCGAAAAGAGTTTCAATGGATCCCAGTGACATGCAACAGGCTGAGCCATCACTCCAGTCA ATGCCACCACATAAGGAACTGAAGTTTGATCTTACTACATCCACTATGGATATAGTTGGAATTGATGATATGGATACCAATCCCCCCTTTGGTTTGCATT TGGAAAATTCATTTGAAAGGGAGAGTTCTGAAGCTGTCCCACATGATTATCTAGATGGTTTAATCTTTGGCCTTGATGATTTAATTGAATTCCCTGAATA CACTGACATTAGATAGGGTCCAATGATAGCTTGAAATGCAGTTTTGAACTATTCCTCTTTGCCATTTGAGTACAGTCTTGGCAAGCTTTCTTGTCAATTC ATGAACAACCGTTTCTCCTCTTGATCTAAATTTTATTGTTGTTGGTATTTACATTTACATGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_23656; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_221266
| Blastp | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 64.84% of identity |
|---|---|
| Blastx | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 74.06% of identity |
| Eggnog | chromatin modification(ENOG410XP0A) |
| Kegg | Link to kegg annotations (AT3G12810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414895.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |