Ll_transcript_221016

Id TrinityFTRINITY_DN52083_c0_g1_i8
Name TranscriptLl_transcript_221016
SequenceGTTAATTTTAAAATTTGAGTTTCAGATTATTTATTTAGGTTTTGATTTTAATTGAAGTCAAAAACTAATAAATTTTAAAATATTGAGAGCTGATATTTAT TCAAATCAATTTAGTTGAAGTCACAAACTAATGCGAAATGACATTTTAAACTGTTTTGTGGGGTTTAAGATTGAAGTTTTCTATTTGTTATATATATACT TGAATTGTAGGAAAAACTATACTCAGTGAAGGGTTTAAATCAAAATAAAATTATGATCGATTTTGTTTTGAAGTTATGGAGTTAATAAAAGATCCTATGC ATTTGTTGTTGAATAATCATGGGTTTGCCGGTTCCTCGTGGTGACTGAAATTGCTTCTGAAAATAAGTGATATTAATCAAGGCTGGAATCTCAAAACGGC TCTTCTATCCAAAATCTTTTCAATGAGATTTGGGAAAGGAACACAAAAAGAGTTAGAGAATTGGCATTATTTTTGCCATAGGCCTTTGGTTTGGAAGCAT TTCTTTATCACTGCCTGGATTTGGTGACAATGATTATTGTATTACAGATGTGTAGGTGTGAGTATTTCTCTTATAAGATGTGAGGCTCTTTTACATTCTC TTTTTTAGAAAAGTATACATGATTTTGTAGAAATATTTTGATCTATATATTATGTAGGTATTCAACAGTATATTGCATCCATGTTTTCTCTGCATTTTAT TTTTATGTAGTGTTTATGTAAATATGCATTATGTAGAACATAAATTTGTATTAGAACATAAAGTGTGTTTCTAAAGAAAGCCATATTTTGGTATGGTAAT GTTTTTTTGCATTTCATGTATGTTTACGTGATTTTCAATTTCCTGAAATGTCAAACTTACGAGTTTGTCAGACATGATGTTGCTGTTAATATTGAAGTTT TTGGATAAATCACATATTTTTGCGTGTTTATAGAACTGAATAGTTCCTTTTTTGCAGACTGTTCCTTTATAATTCTTGTATGTCTGCTAAGACTGTAAAA TATTAGACATTTATTTTGTTTTATTTTATATTTAACTCTGTTATTTACATGTTCTTGGTGGTTTTTTTAATTTTCTGCATGTTTTATTTATAAAGAAAAT GACGTGGAAGATTTTTGATATTATTATACACTAAATGATGTTTTATCACTGCTCTAAACTACCTATTGTTTTTTTTGCTACACAAATGTAAATTCAGCTA TATATGTGTTCTAAATGGTCACCTTTTGTTGTTTATGTTTTCTTCATCAATAGGGCTAAAGTAAGCCCCTTTTAAGCTCTTGACTTCTGTGTTAGCAATA ATTTTTGTTCTGTTTCCTTTATTAATCTATTCCGTCTTATTTTTTTCTGACTAATTTGAACTTAATTTTTTTATAATCTAACCTATTTGCAATTTAAATC GACCGCCATTTTATTTTCGAGTGGAAGCTGTGTGGTGCTTTGAATCTGTGAAATGATCTGTTATTTCTAATTTACAATGCTTATCCATGTAATTTACATG TTGGTTTAGTGGTATAAAACTTGTTTATTTATATTAACGTGCTGTTCTGTATAACCTTACCATCTTCTAAAATTTGAATATACAGTGAAGGCTTTCCCAA AAGATGACCAAAGTAAACCATGCAGATTGACTTCCTTTTTGGGGTACAAGGCTGGGATGACCCACATTGTTAGAGAAGTTGAGAAGCCTGGATCTAGTAA GTGTTTTTTGTTGACTTTGTCAAGGATGGATGTAGAAGCTGTCATGGAGTAATATTTTGTTGATGTTATGTAGCCAAAATATTATCTCTTTGTTTGTGTA AAACATGGGCTAGGCATTTGTGTATCTGGTGCCATATAAAGTTGTGAATGGTGTGCCTGTTTTTCAATTCTGACATTATCTTTTTAAATATACATCAGTT TTTGTTTGAAACGATGAGTACATGTTTTGGGCGAAGTCATTAGTAAGATATTGTGAACTTTTTGCTTTAATGTATGTATTATTGGAGTGTTAATGGTCCT TCAGCTTTTAGAATATAGTGTCTCTATGTTATGTAATGTTAGTGATTGTGATTCATAGTTGTTTTGCTATGTTCCTGATAACATTTTATCTATTACAGAG CTTCATAAGAAAGAGACATGTGAGGCTGTGACTATCATTGAGACACCTCCTTTGGTTGTGGTTGGAGTGGTGGGATATGTCAAGACACCTCGTGGCCTCC GCACTCTGAATACTGTTTGGGCACAACATCTAAGCGAAGAAGTCAAGAGACGTTTCTACAAGAACTGGTCCAAATCTAAGAAGACGGCTTTCACCAAGTA TTCAAAAAGTTATGAAACCGAGGAAGGAAAGAAAGGCATTGAATCTCAACTTGAGAAATTGAAGAAATATGCAACTGTCATTCGTGTTCTTGCTCATACT CAGGTAATGCAGTGTTCTCATTGGATATTGTTTATGACTGACTTCTGCATCTTGTACAATCTAGTCAGTAGGCTGGTGAATGATCTCTCTGTCATTAATG CTAGATTTTGGTTTTTGGTGAGGTAGATTAGTTCATTATCATATGTAGTTGTTAAATCTATCAGGTGATCAGTGCCACAGCTCTTATCATATGTAGTTGT AAGTAATAAGTAGTAGTCCTTCTTTGTTTACTGTAGATAAGGAAGTTGAAGGGTCTAAAACAGAAGAAGGCACATCTGATGGAGATCCAAGTTAATGGTG GTACAATAGCTCAGAAGGTGGATTATGCATACAACTTCTTTGAGAAGCAAATCCCAGTGAATGCAGTTTTCCAAAAAGACGAGATGATTGACATCATTGG TGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTAACACGTTGGGGTGTCACTCGCCTACCTCGTAAAACACATCGGGGTCTGAGGAAGGTTGCTTGCATT GGTGCTTGGCATCCGGCTCGTGTTTCTTTCACAGTGGCCAGGGCTGGACAGAATGGATATCATCACCGAACTGAGCTGAACAAAAAGGTTTACAAAGTTG GCAAATCCGGAGAAGAATCACATACAGCCATCACTGAATTTGACAGGACTGAGAAGGATATTACTCCTATGGGTGGATTTCCTCATTATGGTGTGGTGAA TCATGATTATCTTATGGTGAAGGGAGGCTGTGTTGGACCCAAAAAGAGAGTTGTAACTCTTCGTCAGTCACTACTGAAGCAAACTTCTCGTTTGGCTCTT GAAGAGATCAAACTCAAGTTTGTAGATACCTCATCCAAGTTTGGACATGGCAGGTTCCAAACCACTGAGGAGAAACAGAAGTTTTATGGCCGTGTGAAGG CTTAATTTCTGGATTATTTTTCTTTTTGCTGTGTTTTGGAATAGCTATACCGTTTATTGGATATTTTTGCATATTTTGCTTTCAATTTTGTCGCATAGTT TTGTATTTTCTTAATAAGATACAATAGGTACTGTTACTGAATTGAAAAACCAGTGAATCAAACCCAGTTTTAAATAGAGTATACAATAACAATAGTTTTT GATTATTTTGCAAATGTGGTTATAATTTAATCAGAAAATAGAATACGCAGATAGAACAGAAGCCCATTATAATATCCTTTCAGACCACCAAGACACTATT TACAATGATACCATTCCACCAAGATGATCCCTCGTGCTTTTTGACCAAAATATATCATTGACATATGCAGTATTATAACTTATTGGACAATAGATTTGCA CCATCCTTTACTTTTATAGTTACATATATTCATCCCTAAATAGGGGAGTTTCTATGTTATGGTTTGATTGGTTTGTGAAGGGAACGAGTCTAGTTTTTAG TGTAGGACTTCTCACCTTAATGACAAAATGTATTATCTCTCCTAATTAG BLAST
Tissueflowers
Gene nameLI_gene_23724; 
Additional informationdetails; 

Expression of Ll_transcript_221016

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_221016

Blastp60S ribosomal protein L3 from Oryza sativa with 89.42% of identity
Blastx60S ribosomal protein L3 from Oryza sativa with 89.42% of identity
EggnogOne of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)(COG0087)
KeggLink to kegg annotations (4351604)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434008.1)
PfamRibosomal protein L3 (PF00297.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;