Ll_transcript_29119

• Id Trinity: FTRINITY_DN52274_c2_g2_i1
• Name Transcript: Ll_transcript_29119
• Sequence: CTACTTAATTCATGCACTAGCTCACAATTCATGTCCCCATATTGATGAATGCAAGGATGTTGGAGCATATGATAACATATACCGGCAGTTGCACTTAATA CTATCAATGCTGCTGCAAAGAAATGAAGATCACAAGTCAGAAGTAACTTCTAACAGAGAAAAGGAAAATATATCAATCATCACTTCTATCTTTCATAATA TCAAGCATTCTGAAGATATAGTTGATTCATCAAAATCAAAGAATTCTCATGCAATGTGTGACCTTGGGTTAGCAATAACCAAAAAAATAGTGCAGAAGGA TGTTGATTTGCAAGGATTGTCTGCTTCGGTTTCTCTGCCTCCAATACTATACAAAACACATGAGAATAATGAAGCAGATGGCACTCTGGTAAGTGGTGTG AAGACCTGGCTGGCTGATGAAACTGTCTTGACTCACTTTGAATCCCTTGATCTAGAAATGGTTCCATCCCAATTAGCTGAGGATGAAGTTTCGAAGGACA ATGAAATTGATGGAAATGAAATGCCTCTGGGAAAGATGTTGAAGCAAATAAAATCTCAGAGAACCAGTGTCAAAAAGTTGAAAAAGAATAAGTCTGTGTC AGCTGAAACTGAAAAGGATGACCAAGATATTGATAACTTCAATTTGGTCAGACAAATTAAGTTGAACAACCATGGGTTATCTTATAATTCTGAACCAAGC AATGGTCATGAACATCGCTCGAGTAAGGATGCACTGAAGGATGCAGAAAATGCAACAGGTCAAAAAAGAAAATCTCGAGAAACAAAAGATATCCCAGTGC CTAAACATTGGAGGTCTTCCTGTACTAATTTGATATTATCAAGTAGTGCTTCAAAGGCTTCTCGAAGAGTTCCAAGAGAGGACTCCCCTGGAAACAAATT ACTGTTGGGTTCTGAATTTAATCCTGATCTAGATAGCAATGCTACACAGATAAATATGGTCGAGGGCAGTGATGAAGACCTGCTAGTGTCCTCTTTAAAA CAAAACGTTAAGGGCTCTGGCCAATATCATAATGATGAGACCGGCCAACCTGATGAACATGAGATGAAGAGTTCTGATAATTTAAAATTGAGTGATAGGA CGGCAAGCCACTACTCCAAGTCATCCATAGATTCTACGAAAAAATACAAAAGAAAAAGTATATCTGGTTTGGCTAAGTGCATGACAAGGGGACATGAAAT TGATAATGAAGATCTAATTGGTTGCAGAGTTAAAGTTTGGTGGCCAACGGATAAGAAATTTTATAGAGGCACTCTTAAGTCTTATGATCCTTTGAAAGGA AAGCATGTGATATTATATGATGATGGAGATGTTGAAATACTCCGTTTGGAAAAGGAGTGCTGGGAGCTTGTTGACAAGGGTCACAAATCTACTAAGAAGA TAAAACCCTCTTCAGTTAAATCGTCTGGAAAAAAATGTAAAGCTTCAAGTGGTGCACAACGTAAAATGACAAAAAAAAAATGTGTGTTGAAAAATCTTCG ATCCTTATTGCACATTTGAGATACTCTTTTTTGCTCTAATCAGTTAACTTGTACAATTTTGCCTTACAGAGTTAACGGTAAACAATCTCCTATCAAGCCT GTGAACCGTATGAAAAAATGTGTATTGAAGAGTAATTTTGACCAAGAGGATGCCAAGGAGACTTCTGAGATATCAAATCCTGAAGTCATCATGACATCTA AATCTGATGGGATGAGCTCAGGTAATGTATCTTAAAATCTATGCTATGCATGTGTGGAATGTCATTTGTGTCTTCAGAGTTCAGACAGATTGCGTGATCA TGGTATCAGGAAAATTTGTCTATGCATGGGACGTTTCATTCTATTGATATTTTCTAGGGTAGATCTGAGTACATCCATTCTGAAGGAAAAACTTATAAGT TATAAGCTCCTTCATTTTGGCTAGGATTAGTGCCCCCCTCCCCCCCCAGGTTTCTTAATTCTTAGATAGCAAAGGTTCGTCTTTTAATTTAATATGACTT GCTATGTGGGGTAAATGCGACACGTTATCCTGATCAAGTGCAGTTATCCAGCTATTCAAAATTCTTTCCTTTTGTTCATGAGTTTCATTTTGAAGGTGGT TCAGAAGAGGTGGAATTGGTTGAATCATTGGATGAGATCATAACAATGGAGAGAAGAACAAAGGTATCAAAAGCAGTTTCCAGAAGAAAGAGGATTAAGG AAGCAAAGTTCTTGAGTTATATAGAAGAATCAGAACCAGCGAATAAGGATTATGGTGAGAGGCTTTCAGAAGATAGGTTGCATGTCACACAAGGTGGTCA GAATGTTGATGAAGAAAGTAGTTCAGAAGAGAGAGAGGTAGATGAAGCAAGTGGAGCTTTGAGAGAAATTATCAATGGAGAAGAAGAATCAGATACTGAA GGGTATCAAGGTGACAGCAATGTGGGGGTTGGTCCTAGAAAAATGGAGAAATCACATATGCGGCCAACAAGTCCTGATGAAACCAGGATTACTGAGATTG CTGATGATGTGCCTCTGAGCAAATGGAAGCAACAGACGGGGAAGAAAAGCAGCAGGAAAAGACAGTGAGCAGTTTTAGAAGCTGTAGCTTCATGACTTTC AAGATCAAGATTGCAGTAGAGGTGGTGTTACTGCTGCAGCACAAGTACATGTATCAGCTGGGAATGAAAATGCTACTTAATATATTAATGACCCTGTATA ATGTAGAATAACTGTAATTATTCTCACGTTTAGGGGATTGGTTGAAGGTTGTTGTGGTTTCTTTTTTGGGTTATGGTCCTGCTAATTGACCTTTTACTAG TTCCAGGTGATAGGTTTTAGCATATGATTCATCCTTCCAACTCTATCCACATGCTTACTTTTACTTGACTAGGGGGTTATCGACAGTGTACAGCTATAAG TGGGTATAATTGTATTTGTATCATTTAGCATACTTTTAAAATCTTGAGAACTGAGTGAGGGAAGGATTAAGTGACCTTGAAATGTACTCCTTTATTTCAA ATCCTCTAGTGTCAACTTATTGAGGTTTTTGTATTTTCAATGTTGTTGCTATATGAAAGTTATATTAGGGAAAGGTGAACTGTATGGAGAATTTATAATC GAATGTTGACAGTTTAACGTTTTCAACTACGAGGATAGTCTCCGTTAG
• Tissue: flowers
• Gene name: LI_gene_24579;
• Additional information: details;

Expression of Ll_transcript_29119

FPKM

• FPAB: 0.2
• FPNAB: 0
• LF1: 0.1
• LF2: 0.1
• LF3: 0.7
• LF4: 0
• UF1: 0.2
• UF2: 0
• UF3: 0
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_29119

• Blastp: DNA mismatch repair protein MSH6 from Arabidopsis with 43.94% of identity
• Blastx: DNA mismatch repair protein MSH6 from Arabidopsis with 47.27% of identity
• Eggnog: that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249)
• Kegg: Link to kegg annotations (AT4G02070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463683.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;