Id Trinity | FTRINITY_DN52357_c0_g1_i3 |
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Name Transcript | Ll_transcript_231990 |
Sequence | CTTCACCTAGAAGAAAAAACTCCTCTCTCTCTCTTTCTCTCAGTCTAACTCACTATTTCCTTTGGCTGAAGAGAGAGAAAGGAAAGACAGAAAATACAGC GAAAGAAAAACAAAGGAATTGAAGAAACAATGGGAATGGAATCACCTGATGCAAAAAAGTGTGGGCTGAAGCTTCCAGCAACAATGTCTGGAACCTCACT GCGCCTTGACACGTTTTCATGTTCATCACCACTCTCCATTTCCAACCTCTCTTCACCTTCAAAAACAAACCTTTCTTCACCTTCTTCAACATCCAAATCT TCTTCCACCTGCAGTGACCGATTCATACCTTGTAGATCATCCTCAAGGCTTTACGCCTTCGCCCTCCTCGACAAACCTTCCCCCGTTAAAGATAATAACG GACTCGGAGGAGGAAATAGCATCAATAATGAAGCTTATTCGAGGTTGTTAAAAGCCGAGTTATTTGGTTCTGATTTCGCTTCTCCTTCTCCTTCTCATGC AGGTCATGGATCAGGATCGCCTAGTATCATGAGTCCTAGTAAGAACATACTCCGATTCAAGACAGATTCATGTGGACCCACTTCACCATTTTCTTCACCT TCCACATTAGGAGGACACCGTAATGATCTCTCTTCTGATACTTCCACTCCTCCCAAACCTCCCCGAAAAGTACCCAAAACACCCCACAAGATTCTGGATG CTCCATCACTCCAGGATGATTTTTACTTAAATCTTGTGGACTGGTCCTCTCAGAATGTTCTCGCCGTGGGTTTGGGTACTAGTGTTTATCTCTGGAGTGC TTCTAACAGCAAGGTGACCAGGTTATGTGACTTGGGGCCTCATGATGGTGTGTGTTCTGTTCAGTGGACCAAGGAGGGTTCTTATATATCCATTGGTACC TGTCTTGGTCAAGTTCAGATTTGGGATGGAACTCGCTGCAAGAGAGTCAGAACATTGGGTGGGCATCAGACAAGAACGGGTGTCTTGGCATGGAATTCGC GCATTTTGGCATCAGGAAGCAGGGATAGGAACATACTTCAGCATGACATGAGGGTTTCAAATGACTACATTAACCAGCTTGTGGGCCACAAGTCTGAGGT TTGTGGGTTGAAATGGTCCAGTGATGATAGGGAACTTGCATCTGGTGGAAATGATAACCAGCTATTGGTGTGGAATCAGCACTCTAAGCAACCAGCATTG AGACTTACAGAGCACACAGCTGCAGTGAAGGCCATTTCTTGGTCACCTCACCAGAGCAACCTCCTTGCATCAGGAGGTGGAACAGCAGACAGGTGCATTC GCTTCTGGAACACAACAAATGGACATCAATTGAATTATATTGACACTGGGAGCCAGGTGTGCAACCTTGCCTGGAGTAAAAATGTGAATGAGTTGGTTAG TACTCACGGTTACTCACAGAATCAGATTATGGTATGGAAATATCCATCATTGGCAAAGGTTACAACTCTCACTGGTCACAGCATGCGAGTCCTTTACCTT GCTATGTCCCCTGATGGCCAGACGATAGTTACTGGTGCAGGGGATGAGACACTACGGTTTTGGAATATCTTCCCATCAATGAAAGCACCTGTAAGCAATG TTAATAACTTGATTCTATTCCTCCCCAATGCAAGGTCTCATTATTTGTCTCATGTCTCGTGTTGTTTCAGACCCCTGTTAAAGATACAGCACTATGGTCA CTGGGACGTACCCAAATTCGATGATTCTTCAATCCCGTGGAAAAACTGAACAAGGAAGAGGAAGGAGGGAAAATTCATTATTATTTTTTTGTAATTATTT GGTATATGGAATTATGGAGAGAAAAGTAATTGTTATGAAGTGTAAAGTCATTTAAATAAGTCAATAAATTATACAAGTCTGTTTTGATGATTCTCCAATT CAAGTCTTTTTTCTTTCTTACACATTAACAACATGGGATTGGAGCAAATTCGACAAGAGTGAAATTCAATAAGAATCCTACTGTTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_25067; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231990
Blastp | Protein FIZZY-RELATED 3 from Arabidopsis with 74.39% of identity |
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Blastx | Protein FIZZY-RELATED 3 from Arabidopsis with 72.62% of identity |
Eggnog | wd repeat(COG2319) |
Kegg | Link to kegg annotations (AT5G13840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462015.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |