Ll_transcript_231807

• Id Trinity: FTRINITY_DN52359_c3_g5_i1
• Name Transcript: Ll_transcript_231807
• Sequence: GGTATTTCAATTTGAGGTGTCACGGATTCAGAAAAAAATGCTGGCGACTATAGTAGCATTGGAAGGGAGAGCCTTGAGTTGGTTCCAATGGTGGGAAGGG TGCAACCCCTCACCCACTTGGGAAAGCTTCAAAGTGGCGGTGGTGAGAAGGTTTCAACCATCCATGGTTCAGAATCCCTTCGAATTGTTGCTATCTCTGA AGCAAGATGGGAATGTAGAAACTTATGTTGAGGAATTTGAGAAGTATGCAGGAGCCTTAAGGGGAATTAACCAAGATTTTATAAGAGGAGTATTTCTGAA TGGGCTCAGGGAGGAAATTAAAGCGGGGAGTGTGTCTGCTCACTTTAAGGGTACACTCGAGGTGGAAGGATCTAAGGTAATGGGCGACTACAGAAAATTG TCAAGTGCTGAAATGAGAGAAAAGAGAGAGAAGGGCCTCTGTTTTAGGTGTGATGAACCATATTCCAGGGAGCATAGGTGCAAGAATAAGCAATTGAGAA TGTTGCTTATGGCAGAAGAGGATGAGAATGATGCAGAAGAGGGATTAGACGCAGAGGTGGGGAGCTTCACTTCCCTGCAATTGTCTCTCTGCTCAATGAA GGGTCTCACATCCACCAGGTCTTGGAAGCTTGAGGGGGTTATCAATGGTCATCCCGTAGTGATTTTGATTGATTGCGGTGCCTCACATAACTTCATTTCC AAGGAGTTAATGACTCAATTACAGCTTAAGGTGGAACAGACCAGATCATACATGGTAGAGGTGGGTGATAGCCACCAGGTTGCTTGCAGTGGAAAGTGTT CTCAACTAAGGGTAGAAGTGCAACAAATTGAGGTAACTCAAGACTTCTATTTGTTCACTTTGAGAGGAGTAGATGTAGTGTTGGGATTGGAGTGGTTAGC TACTCTTGGTGAGGTCAGGGCTGATTTTGGAAGGATGAGATTGATGGTGAAGAAGGAAGACTCATTGGTGACCTTAATTGGTAATCCTGCTCTAGCCAAA TCGGAACTATCCTTAGGTGCATTCATGCATGTTTTACGACATCAAGGGGAGGGCTTGCTAATTCAGTGTGATGATTTCTCTTCCATTGAAACAGAGAAGC CGATTCCAAAAGAATTGGAGTTGTTATTACAACAGCATGAAGAGGTATTCCAAGATATGCAAGGGCTACCACCTTCAAGAGAGCATGACCATGCCATATA CTTGAAAGATGGTGCTGATATCTCCAACATCAGACCCTACAGATGCCCTTACTACCAAAAAGCAGAAATAGAAAGGTTGGTGGCAGAGATGCTTGAGGCG GGGGTAATCAGACCTAGCATAAGCCCTTATTCCAGTCCTGCCTTATTGGTGAAGAAGAAGGATGGAGGGTGGAGATTTTGTGTGGACTACAGGGTTCTCA ACAAAGTCACTATCCCGAATAAGTTTCCTATACCTCTGATTGAAGAATTGTTGGATGATTGAGTGGTGCTAAGGTGTTTTCCAAGCTTGATCTCAAGTCA GGTTACCATCAAGTCAGGTTACCATCAAATCAGAATGAGGCCTCAAGATGTGGAGAAAACAACATTTAGGACTCATGAGGGGCATTATGAGTTCTTGGTT ATGCCCTTTGGGCTAACCAATGCTCCCTCAACATTCCAAGCCCTTATGAATGAAATTCTAAAACCTATCTTGAGGAAGTTTACTCTAGTTTTTTTTTATG ACATTTTGGTGTTCAGTCCTGACCTATCTTCTCACATTCTACATTTAGGGGAAGTCATAACCTTGCTTGGAGAACATTCACTAAAGGCCAACTTGAAGAA ATGCAGTTTTGGGAAGGACAGAGTAGACTATCTTGGGCACACCATATCAGCAGGTGGAGTATCAGCTGACGGTTCCAAGGTTGAAGCTATACAAACTTGG CCTCAACCTAACAACATTAAGGGTTTGAGGGGATTCTTGGGCTTAACGGGGTATTATCGGAGGTTTGTTCAGAATTATGGAAGGTTGGCCAAGCCTCTCA CTGATTTACTCAAAAAGGATTCATTTTTGTGGACTGAAGACACCAACTCTGCCTTCACTCAACTTAAGGCTGCCATGACAGAGTTGCCTATGTTGGCCGT ACCAGATTTCAACAAACAGTTTGTGGTTGAGACTGATGCCTCTAGTAAGGGGTTAGGAGCCGTTTTGATGCAAGAGGGTAAGCCCCTTGCACTTTGGAGT AAAGGTTTGTCTTTAAAAGCTCAACAAAAGTCCGTCTAGGGAGTTGATGGCCCTTGTGCAAGCTATACAAAAATAGAGGCATTATCTCTTAGGAAGACAC TTTGTTATTAAAACGGATCAAAGAAGTCTTAAATTCCTTGCTGATCAAAGGTTATATTCAGATGAGCAATTTAAATGGGCTGTGAAATTGATAGGCTTGG ACTTTGAGATCCAATACAAGCCTGGGAGGGAGAATTCTGCAGCTGATGCCCTATCCAGAAGGCTTATGTATGCTGCTCTATTTATGGTGAATAATGAGGA AGTGGACAGTTGGGTACAAGAGTTGCACATGGACCAGAAATGGAAGA
• Tissue: flowers
• Gene name: LI_gene_25077;
• Additional information: details;

Expression of Ll_transcript_231807

FPKM

• FPAB: 0.2
• FPNAB: 0.2
• LF1: 0.3
• LF2: 0.2
• LF3: 0.2
• LF4: 0.1
• UF1: 0
• UF2: 0.2
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_231807

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 42.74% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 43.67% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: Link to cantataDB annotations (CNT0002695)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416449.1)
• Pfam: Retrotransposon gag protein (PF03732.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;